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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:151.3 nTPM
HPA Brain:257.3 nTPM
GTEx:151.3 nTPM
FANTOM5:366.0 Scaled Tags Per Million
Pig:162.6 nTPM
Mouse:103.8 nTPM
Allen mouse:5.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043028Antibody CAB009968
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 168.6
2288 Male, age 75, left hemisphere 211.3
2289 Male, age 61, right hemisphere 182.5
2481 Female, age 94, left hemisphere 181.3
1854 Male, age 80, left hemisphere 162.3
1857 Female, age 85, left hemisphere 159.8
1781 Male, age 74, unknown 155.1
2846 Female, age 79, unknown 151.3
2290 Female, age 72, unknown 145.3
Globus pallidus, externus
nTPM: 224.8
2646 Male, age 61, right hemisphere 239.6
1996 Male, age 80, right hemisphere 237.1
2395 Male, age 75, both hemispheres 225.4
2567 Female, age 72, unknown 218.0
2772 Female, age 79, unknown 203.8
Globus pallidus, internus
nTPM: 257.3
2111 Female, age 85, right hemisphere 306.5
2778 Female, age 91, both hemispheres 286.4
1818 Male, age 74, unknown 267.8
2037 Male, age 80, right hemisphere 264.2
2287 Male, age 75, right hemisphere 252.1
2566 Female, age 72, unknown 228.8
2483 Female, age 94, right hemisphere 195.6
Nucleus accumbens
nTPM: 192.9
2391 Female, age 94, left hemisphere 288.9
2732 Male, age 80, right hemisphere 215.8
2286 Male, age 75, left hemisphere 208.6
2824 Male, age 61, right hemisphere 185.7
2698 Female, age 72, unknown 180.6
1806 Female, age 85, left hemisphere 163.8
1783 Male, age 74, unknown 149.9
1856 Female, age 91, right hemisphere 149.6
Nucleus basalis of Meynert
nTPM: 181.9
2821 Male, age 75, both hemispheres 191.7
2569 Male, age 61, both hemispheres 189.2
2393 Male, age 80, right hemisphere 181.2
2484 Female, age 94, left hemisphere 165.4
Nucleus of the diagonal band
nTPM: 135.9
1979 Male, age 74, unknown 150.3
1812 Female, age 91, both hemispheres 145.1
2029 Male, age 61, right hemisphere 136.5
2775 Male, age 80, right hemisphere 124.4
2195 Female, age 85, both hemispheres 123.2
Putamen
nTPM: 165.2
1829 Male, age 74, unknown 191.6
2482 Female, age 94, left hemisphere 187.1
1937 Female, age 91, right hemisphere 166.3
2489 Female, age 72, unknown 160.7
2466 Female, age 79, unknown 152.7
2647 Male, age 75, left hemisphere 152.7
1838 Male, age 80, right hemisphere 145.5
Septal nuclei
nTPM: 157.3
2394 Male, age 61, left hemisphere 210.0
2199 Male, age 80, right hemisphere 179.6
2059 Female, age 85, both hemispheres 160.1
2009 Female, age 91, both hemispheres 150.7
2629 Female, age 94, right hemisphere 148.8
2031 Female, age 72, unknown 130.6
1960 Male, age 74, unknown 121.6
Stria terminalis, bed nucleus
nTPM: 161.3
2201 Male, age 74, unknown 173.0
2486 Female, age 94, both hemispheres 163.7
1974 Female, age 91, both hemispheres 147.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 151.3
Samples: 246

Max nTPM: 481.3
Min nTPM: 59.7
Std nTPM: 41.2
Median nTPM: 148.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 481.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 260.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 257.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 241.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 228.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 227.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 225.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 225.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 219.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 219.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 214.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 213.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 211.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 210.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 209.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 209.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 208.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 208.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 207.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 205.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 204.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 204.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 204.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 202.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 200.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 197.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 197.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 197.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 196.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 195.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 193.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 192.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 191.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 191.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 191.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 189.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 189.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 188.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 188.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 187.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 186.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 186.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 185.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 184.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 181.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 181.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 180.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 179.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 178.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 178.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 178.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 177.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 177.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 176.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 175.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 174.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 173.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 173.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 172.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 171.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 171.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 170.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 170.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 170.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 170.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 170.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 169.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 169.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 169.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 167.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 167.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 167.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 166.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 166.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 165.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 165.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 164.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 164.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 163.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 163.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 163.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 162.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 162.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 161.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 161.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 160.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 160.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 159.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 159.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 159.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 158.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 158.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 158.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 156.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 156.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 156.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 156.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 155.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 155.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 154.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 154.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 154.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 154.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 154.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 153.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 153.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 153.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 153.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 153.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 153.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 152.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 152.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 152.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 151.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 151.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 150.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 150.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 150.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 150.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 150.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 149.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 149.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 148.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 148.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 148.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 148.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 147.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 147.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 146.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 146.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 146.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 145.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 145.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 144.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 144.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 144.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 144.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 144.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 144.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 143.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 143.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 143.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 142.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 141.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 141.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 140.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 140.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 139.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 139.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 139.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 139.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 139.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 138.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 137.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 137.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 137.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 137.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 136.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 136.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 136.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 135.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 135.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 135.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 135.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 134.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 133.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 133.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 133.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 132.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 132.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 131.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 131.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 129.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 129.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 129.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 128.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 128.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 128.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 127.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 127.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 126.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 126.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 126.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 125.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 125.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 123.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 122.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 122.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 122.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 119.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 118.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 118.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 118.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 118.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 117.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 116.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 116.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 115.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 114.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 113.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 113.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 113.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 113.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 113.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 113.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 112.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 112.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 112.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 111.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 111.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 110.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 110.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 109.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 109.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 109.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 109.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 109.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 108.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 106.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 106.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 106.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 105.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 104.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 102.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 102.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 101.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 99.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 97.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 95.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 95.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 94.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 94.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 94.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 93.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 90.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 89.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 87.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 83.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 83.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 78.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 73.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 70.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 59.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 129.4
Samples: 246

Max nTPM: 240.6
Min nTPM: 47.3
Std nTPM: 26.2
Median nTPM: 127.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 240.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 237.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 199.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 197.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 195.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 194.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 192.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 191.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 187.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 182.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 179.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 173.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 172.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 168.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 167.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 166.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 164.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 164.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 164.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 163.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 162.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 160.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 159.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 158.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 158.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 157.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 156.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 156.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 156.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 156.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 156.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 156.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 155.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 155.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 154.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 153.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 151.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 151.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 150.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 150.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 150.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 150.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 149.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 148.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 148.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 148.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 148.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 148.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 147.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 147.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 147.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 147.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 147.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 147.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 147.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 147.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 146.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 146.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 145.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 145.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 144.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 144.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 143.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 143.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 143.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 142.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 142.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 141.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 141.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 141.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 141.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 140.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 140.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 140.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 139.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 139.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 139.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 139.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 139.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 139.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 139.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 138.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 138.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 138.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 138.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 138.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 137.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 137.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 137.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 136.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 136.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 135.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 135.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 135.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 135.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 134.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 134.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 134.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 134.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 134.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 133.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 133.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 133.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 132.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 132.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 131.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 131.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 130.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 130.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 129.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 129.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 129.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 129.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 129.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 129.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 129.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 128.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 128.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 128.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 128.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 127.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 127.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 127.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 127.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 127.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 127.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 127.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 126.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 126.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 126.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 126.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 125.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 125.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 125.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 125.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 125.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 125.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 124.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 124.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 124.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 124.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 124.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 123.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 123.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 123.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 123.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 122.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 122.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 122.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 122.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 122.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 122.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 121.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 121.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 121.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 121.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 120.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 120.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 120.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 120.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 119.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 119.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 119.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 119.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 118.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 118.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 118.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 117.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 117.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 117.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 117.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 116.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 115.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 115.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 115.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 115.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 115.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 114.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 113.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 113.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 113.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 112.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 112.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 112.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 112.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 111.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 111.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 111.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 111.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 110.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 110.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 110.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 110.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 110.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 110.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 109.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 109.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 108.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 108.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 108.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 107.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 107.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 106.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 106.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 105.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 105.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 105.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 105.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 104.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 104.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 103.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 103.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 103.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 102.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 102.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 102.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 102.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 102.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 101.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 101.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 100.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 100.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 98.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 98.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 98.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 98.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 96.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 96.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 96.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 96.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 96.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 95.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 91.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 90.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 90.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 89.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 85.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 84.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 83.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 81.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 81.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 79.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 79.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 72.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 61.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 47.3
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Brain - Putamen (basal ganglia)
Average nTPM: 141.5
Samples: 205

Max nTPM: 295.0
Min nTPM: 65.1
Std nTPM: 37.4
Median nTPM: 137.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 295.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 279.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 254.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 254.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 249.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 245.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 224.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 216.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 214.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 208.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 206.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 201.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 197.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 195.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 193.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 193.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 192.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 191.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 191.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 190.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 190.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 186.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 185.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 185.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 184.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 183.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 183.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 182.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 181.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 179.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 179.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 178.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 177.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 174.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 171.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 171.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 170.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 170.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 169.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 168.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 165.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 165.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 164.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 164.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 163.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 163.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 162.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 161.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 160.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 159.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 159.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 158.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 158.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 157.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 157.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 157.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 157.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 157.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 156.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 156.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 156.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 155.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 155.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 155.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 155.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 152.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 151.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 151.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 150.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 149.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 149.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 149.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 149.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 148.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 148.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 148.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 147.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 147.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 147.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 146.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 146.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 144.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 144.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 143.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 143.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 143.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 143.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 143.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 143.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 142.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 141.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 141.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 140.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 140.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 139.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 139.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 139.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 139.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 138.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 138.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 138.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 138.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 137.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 137.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 136.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 136.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 136.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 135.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 134.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 134.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 133.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 132.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 132.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 132.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 132.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 131.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 131.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 130.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 130.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 129.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 129.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 129.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 129.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 129.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 128.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 127.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 127.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 127.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 126.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 126.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 125.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 125.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 124.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 124.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 124.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 124.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 123.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 123.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 122.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 121.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 121.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 121.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 121.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 121.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 120.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 120.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 119.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 119.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 119.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 119.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 118.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 118.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 117.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 117.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 115.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 115.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 115.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 115.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 114.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 113.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 113.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 112.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 110.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 110.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 110.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 109.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 109.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 109.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 108.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 107.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 106.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 105.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 105.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 105.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 105.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 105.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 105.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 104.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 104.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 104.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 102.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 102.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 99.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 99.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 99.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 99.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 98.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 95.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 95.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 94.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 93.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 92.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 91.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 90.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 89.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 89.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 85.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 84.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 84.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 82.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 81.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 79.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 79.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 77.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 65.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

366.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 223.5
FF:10164-103B2 76 years, female 223.5
Nucleus accumbens
Scaled Tags Per Million: 306.6
FF:10037-101F1 23-56 years, mixed 306.6
Putamen
Scaled Tags Per Million: 198.5
FF:10176-103C5 60 years, female 198.5
Globus pallidus
Scaled Tags Per Million: 366.0
FF:10161-103A8 76 years, female 371.9
FF:10175-103C4 60 years, female 360.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

162.6
Pig sample Sample description nTPM
Caudate
nTPM: 134.0
Samples: 4

Max nTPM: 136.3
Min nTPM: 131.1
Sample A Female 136.3
Sample B Female 131.1
Sample C Male 135.8
Sample D Male 132.8
Putamen
nTPM: 162.6
Samples: 4

Max nTPM: 176.1
Min nTPM: 144.8
Sample A Female 176.1
Sample B Female 144.8
Sample C Male 168.5
Sample D Male 161.1
Septum
nTPM: 157.5
Samples: 4

Max nTPM: 182.8
Min nTPM: 146.9
Sample A Female 148.7
Sample B Female 146.9
Sample C Male 151.7
Sample D Male 182.8
Ventral pallidum
nTPM: 157.3
Samples: 4

Max nTPM: 175.2
Min nTPM: 130.2
Sample A Female 130.2
Sample B Female 161.0
Sample C Male 162.9
Sample D Male 175.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 103.8
Samples: 4

Max nTPM: 112.8
Min nTPM: 100.2
Sample A Male 101.5
Sample B Male 100.6
Sample C Female 112.8
Sample D Female 100.2
Septum
nTPM: 83.2
Samples: 4

Max nTPM: 95.2
Min nTPM: 76.8
Sample A Male 78.0
Sample B Male 76.8
Sample C Female 82.6
Sample D Female 95.2
Ventral forebrain
nTPM: 91.5
Samples: 4

Max nTPM: 100.5
Min nTPM: 78.6
Sample A Male 100.5
Sample B Male 87.6
Sample C Female 78.6
Sample D Female 99.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.9
67978473 Antisense, RP_040923_01_B10, Mouse strain C57BL/6J (56 days, male) 11.8
71991953 Antisense, RP_051012_03_G11, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 4.5
67978473 Antisense, RP_040923_01_B10, Mouse strain C57BL/6J (56 days, male) 9.1
71991953 Antisense, RP_051012_03_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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