We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ATP5ME
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ATP5ME
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:671.7 nTPM
HPA Brain:276.1 nTPM
GTEx:671.7 nTPM
FANTOM5:301.0 Scaled Tags Per Million
Pig:54.2 nTPM
Mouse:533.3 nTPM
Allen mouse:1.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035010
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

276.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 215.3
2481 Female, age 94, left hemisphere 240.7
2846 Female, age 79, unknown 234.5
2290 Female, age 72, unknown 223.7
1857 Female, age 85, left hemisphere 217.9
1781 Male, age 74, unknown 214.7
1854 Male, age 80, left hemisphere 214.7
2288 Male, age 75, left hemisphere 209.4
2289 Male, age 61, right hemisphere 166.5
Globus pallidus, externus
nTPM: 260.0
1996 Male, age 80, right hemisphere 313.6
2772 Female, age 79, unknown 285.2
2567 Female, age 72, unknown 237.4
2646 Male, age 61, right hemisphere 232.0
2395 Male, age 75, both hemispheres 231.6
Globus pallidus, internus
nTPM: 276.1
2287 Male, age 75, right hemisphere 373.0
1818 Male, age 74, unknown 283.2
2037 Male, age 80, right hemisphere 280.9
2566 Female, age 72, unknown 264.0
2778 Female, age 91, both hemispheres 255.4
2483 Female, age 94, right hemisphere 250.4
2111 Female, age 85, right hemisphere 225.9
Nucleus accumbens
nTPM: 226.4
2698 Female, age 72, unknown 301.9
2391 Female, age 94, left hemisphere 286.1
1856 Female, age 91, right hemisphere 237.9
1783 Male, age 74, unknown 230.6
2286 Male, age 75, left hemisphere 213.6
1806 Female, age 85, left hemisphere 197.0
2824 Male, age 61, right hemisphere 193.2
2732 Male, age 80, right hemisphere 150.6
Nucleus basalis of Meynert
nTPM: 228.5
2821 Male, age 75, both hemispheres 296.3
2569 Male, age 61, both hemispheres 226.3
2393 Male, age 80, right hemisphere 200.3
2484 Female, age 94, left hemisphere 191.3
Nucleus of the diagonal band
nTPM: 204.7
1812 Female, age 91, both hemispheres 238.2
2195 Female, age 85, both hemispheres 214.2
2775 Male, age 80, right hemisphere 204.5
2029 Male, age 61, right hemisphere 197.7
1979 Male, age 74, unknown 169.1
Putamen
nTPM: 192.5
2482 Female, age 94, left hemisphere 212.2
1937 Female, age 91, right hemisphere 203.7
1838 Male, age 80, right hemisphere 198.4
2647 Male, age 75, left hemisphere 196.9
2466 Female, age 79, unknown 190.1
2489 Female, age 72, unknown 178.5
1829 Male, age 74, unknown 167.9
Septal nuclei
nTPM: 185.3
1960 Male, age 74, unknown 224.1
2031 Female, age 72, unknown 201.7
2629 Female, age 94, right hemisphere 192.4
2009 Female, age 91, both hemispheres 187.5
2199 Male, age 80, right hemisphere 187.5
2059 Female, age 85, both hemispheres 161.0
2394 Male, age 61, left hemisphere 143.2
Stria terminalis, bed nucleus
nTPM: 172.0
1974 Female, age 91, both hemispheres 199.4
2201 Male, age 74, unknown 184.5
2486 Female, age 94, both hemispheres 132.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

671.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 568.9
Samples: 246

Max nTPM: 1700.5
Min nTPM: 261.6
Std nTPM: 179.9
Median nTPM: 539.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1700.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1260.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1258.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1238.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1172.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1123.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1030.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 996.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 984.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 959.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 912.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 881.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 866.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 862.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 854.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 848.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 826.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 807.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 802.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 801.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 795.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 794.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 771.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 771.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 769.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 752.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 749.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 748.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 744.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 742.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 737.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 729.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 729.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 718.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 718.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 711.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 709.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 703.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 703.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 699.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 698.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 693.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 686.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 682.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 677.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 676.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 668.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 666.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 664.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 662.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 662.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 661.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 656.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 656.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 656.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 656.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 654.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 653.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 649.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 645.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 638.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 637.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 631.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 629.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 629.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 627.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 621.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 618.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 607.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 606.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 606.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 606.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 604.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 603.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 603.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 600.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 598.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 595.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 593.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 593.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 590.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 589.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 589.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 588.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 588.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 588.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 588.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 587.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 585.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 580.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 577.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 576.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 573.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 572.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 569.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 569.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 563.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 561.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 559.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 558.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 558.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 557.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 556.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 556.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 555.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 555.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 554.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 554.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 554.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 553.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 553.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 549.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 548.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 547.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 545.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 544.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 544.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 544.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 543.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 542.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 542.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 539.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 539.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 539.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 538.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 537.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 536.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 533.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 530.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 530.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 525.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 525.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 522.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 522.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 522.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 516.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 513.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 511.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 511.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 510.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 509.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 508.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 506.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 505.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 505.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 504.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 503.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 502.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 500.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 499.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 498.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 496.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 493.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 493.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 492.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 492.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 489.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 489.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 488.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 487.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 486.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 486.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 486.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 483.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 482.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 480.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 480.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 479.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 478.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 477.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 476.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 475.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 475.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 474.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 473.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 473.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 472.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 472.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 470.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 468.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 467.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 466.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 465.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 465.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 465.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 463.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 462.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 461.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 461.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 460.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 459.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 456.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 454.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 452.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 448.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 446.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 444.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 444.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 442.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 442.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 440.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 439.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 437.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 434.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 433.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 431.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 429.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 427.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 425.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 425.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 423.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 423.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 418.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 416.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 414.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 413.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 412.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 409.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 409.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 409.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 408.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 401.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 401.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 400.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 397.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 393.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 385.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 382.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 381.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 380.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 378.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 375.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 370.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 363.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 354.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 345.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 331.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 325.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 325.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 315.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 314.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 308.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 288.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 275.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 270.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 261.6
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 607.6
Samples: 246

Max nTPM: 1778.8
Min nTPM: 266.5
Std nTPM: 199.3
Median nTPM: 587.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1778.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1633.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1211.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1151.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1067.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1050.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1023.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1017.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1013.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1013.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1005.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 972.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 968.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 946.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 935.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 933.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 921.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 920.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 915.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 903.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 890.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 885.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 867.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 863.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 862.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 859.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 856.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 855.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 853.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 838.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 830.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 815.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 804.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 802.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 801.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 798.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 777.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 773.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 771.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 767.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 763.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 746.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 736.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 734.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 719.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 717.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 716.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 713.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 713.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 710.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 707.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 707.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 705.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 703.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 703.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 700.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 698.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 698.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 691.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 691.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 689.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 685.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 685.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 679.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 679.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 676.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 676.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 675.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 670.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 668.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 666.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 665.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 659.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 655.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 655.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 654.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 654.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 653.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 653.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 651.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 640.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 640.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 639.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 638.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 638.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 632.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 630.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 630.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 627.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 626.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 625.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 623.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 623.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 621.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 620.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 620.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 619.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 617.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 615.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 614.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 613.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 612.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 611.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 610.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 609.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 609.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 608.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 606.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 604.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 603.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 601.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 601.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 600.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 598.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 596.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 592.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 590.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 589.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 589.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 589.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 588.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 588.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 587.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 586.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 586.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 585.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 583.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 581.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 579.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 578.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 571.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 571.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 569.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 561.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 561.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 559.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 555.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 554.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 551.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 550.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 548.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 547.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 547.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 543.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 540.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 538.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 537.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 537.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 536.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 535.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 535.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 535.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 534.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 533.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 530.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 529.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 528.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 525.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 523.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 520.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 519.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 519.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 518.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 517.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 514.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 511.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 511.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 504.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 504.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 501.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 500.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 499.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 499.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 499.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 496.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 494.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 492.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 485.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 479.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 479.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 478.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 476.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 475.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 474.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 474.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 473.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 473.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 472.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 470.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 468.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 468.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 468.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 467.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 464.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 463.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 463.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 457.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 456.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 456.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 451.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 450.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 449.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 449.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 445.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 444.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 439.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 439.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 434.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 433.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 431.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 431.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 425.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 425.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 420.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 418.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 415.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 414.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 413.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 412.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 412.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 411.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 410.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 410.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 406.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 405.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 397.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 396.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 392.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 384.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 382.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 373.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 367.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 366.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 362.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 351.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 341.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 341.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 339.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 323.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 313.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 299.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 277.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 269.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 267.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 267.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 266.5
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 671.7
Samples: 205

Max nTPM: 2018.2
Min nTPM: 250.9
Std nTPM: 196.3
Median nTPM: 644.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2018.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1228.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1165.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1121.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1089.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1084.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1063.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1055.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1052.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1047.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1027.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 975.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 975.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 967.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 964.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 954.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 950.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 940.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 936.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 923.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 912.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 908.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 905.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 903.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 894.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 886.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 883.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 881.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 874.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 872.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 870.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 852.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 852.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 846.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 844.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 831.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 819.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 795.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 794.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 787.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 785.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 780.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 778.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 777.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 770.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 769.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 762.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 757.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 756.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 755.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 754.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 752.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 752.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 750.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 750.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 745.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 743.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 743.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 742.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 740.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 736.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 734.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 734.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 732.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 729.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 727.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 719.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 714.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 713.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 712.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 710.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 710.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 708.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 701.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 700.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 699.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 698.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 697.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 695.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 692.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 690.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 687.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 679.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 678.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 678.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 677.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 677.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 675.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 669.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 666.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 665.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 665.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 662.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 661.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 654.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 653.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 651.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 651.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 650.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 648.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 646.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 645.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 644.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 643.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 641.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 636.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 632.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 630.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 628.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 628.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 627.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 621.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 621.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 619.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 618.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 617.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 615.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 615.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 615.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 615.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 613.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 608.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 607.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 604.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 603.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 603.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 597.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 596.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 593.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 588.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 587.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 586.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 586.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 583.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 582.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 582.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 581.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 579.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 578.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 576.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 574.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 572.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 570.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 565.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 565.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 562.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 559.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 555.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 552.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 550.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 550.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 550.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 548.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 547.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 546.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 539.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 539.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 538.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 537.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 537.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 537.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 536.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 536.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 529.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 522.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 515.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 511.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 510.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 509.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 506.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 499.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 497.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 496.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 493.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 485.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 484.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 480.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 480.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 478.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 478.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 477.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 471.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 467.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 465.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 461.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 460.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 458.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 457.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 456.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 452.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 449.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 443.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 442.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 427.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 414.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 412.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 404.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 403.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 402.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 397.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 396.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 393.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 366.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 363.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 250.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

301.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 168.2
FF:10164-103B2 76 years, female 168.2
Nucleus accumbens
Scaled Tags Per Million: 86.8
FF:10037-101F1 23-56 years, mixed 86.8
Putamen
Scaled Tags Per Million: 205.4
FF:10176-103C5 60 years, female 205.4
Globus pallidus
Scaled Tags Per Million: 301.0
FF:10175-103C4 60 years, female 415.9
FF:10161-103A8 76 years, female 186.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.2
Pig sample Sample description nTPM
Caudate
nTPM: 42.4
Samples: 4

Max nTPM: 48.1
Min nTPM: 38.7
Sample A Female 38.7
Sample B Female 43.1
Sample C Male 48.1
Sample D Male 39.5
Putamen
nTPM: 54.3
Samples: 4

Max nTPM: 77.8
Min nTPM: 40.3
Sample A Female 40.3
Sample B Female 48.3
Sample C Male 77.8
Sample D Male 50.6
Septum
nTPM: 36.1
Samples: 4

Max nTPM: 37.4
Min nTPM: 35.0
Sample A Female 37.4
Sample B Female 36.6
Sample C Male 35.3
Sample D Male 35.0
Ventral pallidum
nTPM: 39.2
Samples: 4

Max nTPM: 46.6
Min nTPM: 33.9
Sample A Female 40.0
Sample B Female 46.6
Sample C Male 36.1
Sample D Male 33.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

533.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 533.3
Samples: 4

Max nTPM: 558.9
Min nTPM: 504.5
Sample A Male 553.2
Sample B Male 516.5
Sample C Female 558.9
Sample D Female 504.5
Septum
nTPM: 475.2
Samples: 4

Max nTPM: 539.7
Min nTPM: 412.5
Sample A Male 412.5
Sample B Male 532.8
Sample C Female 539.7
Sample D Female 415.7
Ventral forebrain
nTPM: 490.2
Samples: 4

Max nTPM: 597.1
Min nTPM: 446.7
Sample A Male 446.7
Sample B Male 449.2
Sample C Female 597.1
Sample D Female 467.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.6
74426449 Antisense, RP_051121_02_B10, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 1.0
74426449 Antisense, RP_051121_02_B10, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org