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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:186.2 nTPM
HPA Brain:106.2 nTPM
GTEx:186.2 nTPM
FANTOM5:233.9 Scaled Tags Per Million
Pig:324.5 nTPM
Mouse:442.6 nTPM
Allen mouse:6.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044577
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 85.2
2846 Female, age 79, unknown 100.5
2481 Female, age 94, left hemisphere 95.0
1854 Male, age 80, left hemisphere 91.3
1781 Male, age 74, unknown 89.5
1857 Female, age 85, left hemisphere 86.4
2290 Female, age 72, unknown 85.2
2288 Male, age 75, left hemisphere 81.7
2289 Male, age 61, right hemisphere 52.3
Globus pallidus, externus
nTPM: 84.2
2772 Female, age 79, unknown 123.5
2395 Male, age 75, both hemispheres 103.4
1996 Male, age 80, right hemisphere 94.7
2646 Male, age 61, right hemisphere 53.3
2567 Female, age 72, unknown 45.8
Globus pallidus, internus
nTPM: 84.9
2483 Female, age 94, right hemisphere 117.7
2287 Male, age 75, right hemisphere 108.7
2778 Female, age 91, both hemispheres 90.4
2037 Male, age 80, right hemisphere 88.0
1818 Male, age 74, unknown 83.8
2111 Female, age 85, right hemisphere 54.8
2566 Female, age 72, unknown 50.6
Nucleus accumbens
nTPM: 99.0
1856 Female, age 91, right hemisphere 126.6
1783 Male, age 74, unknown 104.3
2824 Male, age 61, right hemisphere 103.8
2286 Male, age 75, left hemisphere 102.4
1806 Female, age 85, left hemisphere 101.3
2698 Female, age 72, unknown 91.3
2391 Female, age 94, left hemisphere 90.9
2732 Male, age 80, right hemisphere 71.6
Nucleus basalis of Meynert
nTPM: 79.3
2484 Female, age 94, left hemisphere 93.4
2821 Male, age 75, both hemispheres 84.9
2393 Male, age 80, right hemisphere 83.7
2569 Male, age 61, both hemispheres 55.2
Nucleus of the diagonal band
nTPM: 106.2
1812 Female, age 91, both hemispheres 145.0
2775 Male, age 80, right hemisphere 128.3
2029 Male, age 61, right hemisphere 99.6
2195 Female, age 85, both hemispheres 85.7
1979 Male, age 74, unknown 72.4
Putamen
nTPM: 82.3
2466 Female, age 79, unknown 117.3
1937 Female, age 91, right hemisphere 96.9
1838 Male, age 80, right hemisphere 95.5
2482 Female, age 94, left hemisphere 84.8
1829 Male, age 74, unknown 66.4
2647 Male, age 75, left hemisphere 62.9
2489 Female, age 72, unknown 52.3
Septal nuclei
nTPM: 89.4
2031 Female, age 72, unknown 149.1
1960 Male, age 74, unknown 114.0
2009 Female, age 91, both hemispheres 99.0
2394 Male, age 61, left hemisphere 71.8
2629 Female, age 94, right hemisphere 70.7
2059 Female, age 85, both hemispheres 62.5
2199 Male, age 80, right hemisphere 58.9
Stria terminalis, bed nucleus
nTPM: 87.4
1974 Female, age 91, both hemispheres 122.4
2486 Female, age 94, both hemispheres 82.7
2201 Male, age 74, unknown 57.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 150.7
Samples: 246

Max nTPM: 439.7
Min nTPM: 78.5
Std nTPM: 50.4
Median nTPM: 138.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 439.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 355.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 353.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 335.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 316.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 298.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 286.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 282.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 245.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 242.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 242.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 239.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 238.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 231.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 230.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 230.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 229.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 229.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 221.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 221.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 220.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 218.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 215.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 211.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 206.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 204.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 202.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 202.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 201.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 201.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 200.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 199.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 199.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 198.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 193.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 192.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 189.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 188.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 188.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 187.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 187.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 187.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 185.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 182.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 181.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 181.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 181.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 181.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 181.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 180.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 179.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 179.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 179.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 179.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 178.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 178.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 178.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 178.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 176.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 176.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 174.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 174.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 173.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 173.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 172.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 172.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 170.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 168.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 166.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 166.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 166.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 164.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 163.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 161.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 160.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 160.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 160.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 160.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 159.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 159.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 159.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 158.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 158.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 157.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 157.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 157.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 157.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 157.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 155.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 154.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 154.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 153.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 153.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 152.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 152.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 152.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 151.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 150.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 150.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 150.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 150.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 149.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 149.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 148.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 147.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 147.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 147.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 147.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 146.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 146.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 144.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 144.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 143.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 142.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 142.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 142.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 141.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 141.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 140.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 140.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 139.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 139.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 138.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 138.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 138.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 136.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 136.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 136.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 136.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 135.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 135.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 135.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 135.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 134.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 134.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 134.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 134.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 133.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 133.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 133.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 132.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 132.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 132.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 131.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 131.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 130.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 130.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 130.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 129.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 129.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 128.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 127.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 127.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 126.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 126.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 126.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 126.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 125.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 125.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 125.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 124.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 124.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 124.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 123.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 123.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 123.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 123.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 122.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 122.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 121.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 121.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 121.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 120.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 119.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 118.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 118.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 117.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 117.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 117.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 117.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 117.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 116.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 115.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 114.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 114.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 114.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 114.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 113.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 113.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 112.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 112.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 112.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 111.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 111.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 111.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 110.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 110.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 110.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 109.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 109.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 108.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 107.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 107.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 107.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 106.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 106.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 106.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 105.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 104.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 104.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 103.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 103.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 103.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 102.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 102.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 102.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 102.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 101.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 101.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 100.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 99.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 98.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 97.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 97.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 97.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 96.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 94.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 93.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 92.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 90.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 89.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 85.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 85.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 84.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 83.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 186.2
Samples: 246

Max nTPM: 413.4
Min nTPM: 101.6
Std nTPM: 50.3
Median nTPM: 181.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 413.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 386.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 385.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 384.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 318.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 314.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 306.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 306.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 301.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 280.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 279.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 279.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 272.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 267.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 263.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 262.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 259.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 255.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 255.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 254.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 254.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 253.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 251.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 248.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 247.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 245.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 245.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 244.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 243.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 243.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 239.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 235.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 235.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 232.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 230.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 229.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 228.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 227.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 226.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 225.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 224.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 224.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 223.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 222.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 221.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 221.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 219.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 217.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 216.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 215.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 215.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 215.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 215.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 213.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 212.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 212.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 212.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 212.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 211.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 211.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 210.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 210.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 209.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 209.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 208.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 207.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 207.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 207.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 206.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 206.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 206.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 206.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 206.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 204.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 203.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 203.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 202.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 202.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 200.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 200.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 200.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 199.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 199.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 199.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 199.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 198.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 197.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 197.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 197.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 196.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 195.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 194.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 193.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 192.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 192.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 192.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 192.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 191.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 191.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 191.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 190.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 189.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 189.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 188.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 187.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 186.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 186.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 186.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 185.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 185.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 185.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 185.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 185.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 184.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 184.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 183.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 183.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 183.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 183.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 182.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 182.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 182.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 182.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 181.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 180.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 180.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 179.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 178.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 177.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 177.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 177.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 177.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 176.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 176.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 175.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 174.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 174.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 174.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 173.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 173.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 173.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 172.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 171.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 171.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 170.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 168.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 168.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 168.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 168.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 168.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 167.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 167.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 166.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 166.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 165.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 164.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 163.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 163.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 163.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 162.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 162.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 161.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 161.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 161.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 161.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 159.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 158.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 157.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 157.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 156.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 155.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 155.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 155.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 155.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 154.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 154.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 153.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 153.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 152.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 152.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 151.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 151.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 151.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 151.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 150.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 150.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 149.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 149.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 149.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 148.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 148.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 146.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 146.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 145.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 145.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 145.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 145.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 144.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 144.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 144.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 142.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 142.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 142.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 141.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 140.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 139.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 138.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 138.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 137.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 137.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 137.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 136.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 136.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 136.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 135.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 134.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 134.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 134.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 133.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 133.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 133.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 132.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 130.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 129.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 128.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 127.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 124.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 123.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 123.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 123.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 123.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 122.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 121.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 121.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 120.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 120.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 119.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 118.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 117.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 115.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 112.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 111.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 109.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 107.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 105.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 101.6
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Brain - Putamen (basal ganglia)
Average nTPM: 153.2
Samples: 205

Max nTPM: 298.3
Min nTPM: 87.7
Std nTPM: 41.9
Median nTPM: 142.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 298.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 296.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 292.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 281.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 272.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 271.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 269.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 259.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 253.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 246.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 235.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 235.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 235.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 229.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 228.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 227.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 225.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 213.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 211.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 207.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 206.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 204.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 204.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 204.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 199.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 199.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 197.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 195.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 194.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 193.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 193.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 191.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 191.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 190.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 189.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 189.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 185.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 185.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 184.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 181.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 178.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 177.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 177.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 177.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 177.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 176.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 174.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 172.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 172.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 172.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 172.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 171.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 170.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 170.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 170.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 169.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 168.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 168.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 167.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 166.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 166.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 166.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 165.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 164.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 164.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 164.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 163.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 163.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 163.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 162.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 160.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 159.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 159.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 159.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 158.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 158.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 157.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 157.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 157.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 156.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 156.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 155.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 155.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 154.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 152.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 150.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 150.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 150.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 149.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 149.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 148.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 147.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 146.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 145.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 144.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 144.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 143.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 143.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 143.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 143.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 142.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 142.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 142.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 141.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 141.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 141.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 141.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 140.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 140.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 140.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 139.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 139.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 139.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 139.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 138.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 138.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 137.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 137.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 136.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 136.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 135.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 135.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 135.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 134.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 134.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 134.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 134.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 134.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 134.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 133.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 133.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 133.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 132.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 130.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 130.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 129.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 128.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 128.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 128.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 127.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 127.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 126.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 126.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 124.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 124.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 124.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 124.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 124.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 124.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 124.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 123.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 123.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 123.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 121.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 121.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 119.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 119.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 119.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 118.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 118.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 118.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 118.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 118.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 118.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 118.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 117.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 117.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 117.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 117.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 116.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 116.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 116.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 116.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 116.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 115.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 115.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 115.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 115.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 114.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 114.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 114.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 114.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 113.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 112.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 111.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 109.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 108.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 107.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 107.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 107.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 107.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 107.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 107.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 107.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 106.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 105.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 105.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 105.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 104.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 103.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 98.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 98.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 96.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 96.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 87.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

233.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 227.1
FF:10164-103B2 76 years, female 227.1
Nucleus accumbens
Scaled Tags Per Million: 209.6
FF:10037-101F1 23-56 years, mixed 209.6
Putamen
Scaled Tags Per Million: 233.9
FF:10176-103C5 60 years, female 233.9
Globus pallidus
Scaled Tags Per Million: 214.5
FF:10175-103C4 60 years, female 288.0
FF:10161-103A8 76 years, female 141.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

324.5
Pig sample Sample description nTPM
Caudate
nTPM: 238.9
Samples: 4

Max nTPM: 267.3
Min nTPM: 220.4
Sample A Female 220.4
Sample B Female 234.2
Sample C Male 267.3
Sample D Male 233.7
Putamen
nTPM: 324.5
Samples: 4

Max nTPM: 543.0
Min nTPM: 223.1
Sample A Female 223.1
Sample B Female 260.4
Sample C Male 543.0
Sample D Male 271.5
Septum
nTPM: 204.6
Samples: 4

Max nTPM: 231.1
Min nTPM: 157.6
Sample A Female 228.9
Sample B Female 200.8
Sample C Male 231.1
Sample D Male 157.6
Ventral pallidum
nTPM: 205.1
Samples: 4

Max nTPM: 239.0
Min nTPM: 178.4
Sample A Female 203.4
Sample B Female 239.0
Sample C Male 199.7
Sample D Male 178.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

442.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 283.9
Samples: 4

Max nTPM: 293.4
Min nTPM: 279.4
Sample A Male 282.4
Sample B Male 293.4
Sample C Female 279.4
Sample D Female 280.5
Septum
nTPM: 442.6
Samples: 4

Max nTPM: 497.9
Min nTPM: 404.0
Sample A Male 407.1
Sample B Male 497.9
Sample C Female 461.3
Sample D Female 404.0
Ventral forebrain
nTPM: 351.5
Samples: 4

Max nTPM: 405.6
Min nTPM: 313.7
Sample A Male 335.6
Sample B Male 351.0
Sample C Female 405.6
Sample D Female 313.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.0
69735001 Antisense, RP_050503_01_H04, Mouse strain C57BL/6J (56 days, male) 5.3
73520984 Antisense, RP_051101_02_G03, Mouse strain C57BL/6J (56 days, male) 2.7
Pallidum
Expression energy: 6.4
69735001 Antisense, RP_050503_01_H04, Mouse strain C57BL/6J (56 days, male) 6.8
73520984 Antisense, RP_051101_02_G03, Mouse strain C57BL/6J (56 days, male) 6.0

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