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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:130.1 nTPM
HPA Brain:80.4 nTPM
GTEx:130.1 nTPM
FANTOM5:50.4 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 73.9
2565 Male, age 75, midline 85.9
1981 Female, age 72, midline 79.0
2816 Male, age 47, midline 75.8
2194 Female, age 79, both hemispheres 73.0
2048 Male, age 55, midline 55.9
Cervical spinal cord, dorsal horn
nTPM: 80.4
2173 Female, age 72, unknown 91.6
2296 Male, age 66, both hemispheres 87.2
2721 Male, age 90, both hemispheres 78.7
2297 Male, age 75, both hemispheres 77.9
2069 Male, age 47, both hemispheres 77.8
1877 Male, age 55, unknown 69.3
Cervical spinal cord, ventral horn
nTPM: 75.9
2098 Female, age 72, unknown 87.0
2480 Male, age 75, both hemispheres 82.0
2809 Male, age 90, both hemispheres 75.8
2820 Female, age 79, both hemispheres 74.0
2068 Male, age 55, unknown 70.2
2295 Male, age 66, both hemispheres 66.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 130.1
Samples: 159

Max nTPM: 222.3
Min nTPM: 69.0
Std nTPM: 28.1
Median nTPM: 126.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 222.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 209.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 194.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 192.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 189.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 188.9
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 185.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 184.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 182.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 180.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 178.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 178.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 178.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 175.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 174.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 174.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 174.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 168.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 168.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 167.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 165.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 164.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 160.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 157.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 156.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 155.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 155.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 155.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 154.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 153.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 152.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 152.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 151.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 150.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 149.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 148.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 147.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 146.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 146.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 145.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 145.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 145.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 145.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 144.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 143.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 143.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 142.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 141.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 141.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 141.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 140.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 140.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 140.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 139.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 138.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 137.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 137.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 136.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 136.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 136.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 134.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 134.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 134.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 133.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 132.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 132.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 131.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 131.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 131.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 131.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 130.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 130.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 129.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 129.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 128.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 128.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 128.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 128.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 127.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 126.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 126.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 125.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 124.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 123.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 123.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 123.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 123.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 123.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 122.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 122.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 121.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 121.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 120.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 120.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 120.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 119.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 119.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 118.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 117.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 117.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 117.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 117.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 116.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 116.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 115.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 114.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 114.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 114.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 113.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 113.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 113.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 113.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 112.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 112.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 112.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 112.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 111.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 111.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 111.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 110.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 109.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 108.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 107.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 107.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 107.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 106.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 106.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 106.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 105.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 104.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 104.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 104.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 104.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 103.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 102.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 102.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 101.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 101.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 101.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 100.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 100.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 100.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 98.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 98.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 97.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 96.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 94.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 93.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 93.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 91.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 89.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 88.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 88.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 86.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 86.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 81.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 79.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 75.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 69.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

50.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 50.4
FF:10181-103D1 60 years, female 55.4
FF:10159-103A6 76 years, female 45.3

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