Tissue expression of CDH2 - Staining in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	58.5	nTPM
GTEx:	58.5	nTPM
FANTOM5:	29.7	Scaled Tags Per Million

Pig:	44.0	nTPM
Mouse:	77.3	nTPM

RETINA - GTEx RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	58.5

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 58.5

Samples: 105

Max nTPM: 83.1
Min nTPM: 38.7
Std nTPM: 9.4
Median nTPM:

490_1	67 years, female	83.1
414_1	84 years, female	79.6
526_1	61 years, male	78.3
468_1	89 years, male	77.0
415_1	77 years, female	76.7
246_1	77 years, male	75.6
99_1	64 years, male	75.1
375_1	74 years, female	74.4
347_1	72 years, male	74.1
172_1	72 years, female	72.7
237_1	82 years, male	72.1
189_1	76 years, male	70.3
389_1	86 years, female	70.2
466_1	57 years, female	70.2
32_1	67 years, male	69.6
137_1	83 years, male	69.5
177_1	74 years, male	69.2
266_1	85 years, male	68.6
355_1	70 years, female	68.4
265_1	87 years, male	67.4
349_1	83 years, male	67.3
495_1	57 years, female	66.3
126_1	63 years, male	65.6
499_1	55 years, female	64.8
324_1	76 years, male	64.7
425_1	59 years, female	64.6
292_1	71 years, male	64.3
115_1	83 years, male	64.2
518_1	75 years, female	63.8
117_1	61 years, male	63.6
317_1	60 years, male	63.6
251_1	78 years, male	62.8
377_1	82 years, female	62.8
149_1	88 years, male	61.9
163_1	78 years, male	61.9
217_1	76 years, male	61.8
291_1	76 years, male	61.7
307_1	66 years, female	61.3
386_1	76 years, male	61.0
254_1	77 years, female	60.8
491_1	89 years, female	60.7
406_1	79 years, male	60.5
376_1	75 years, female	60.4
35_1	74 years, female	59.7
405_1	91 years, male	59.3
42_1	85 years, male	59.2
308_1	70 years, female	59.2
321_1	62 years, female	58.9
480_1	63 years, male	58.4
153_1	70 years, female	58.1
243_1	75 years, male	58.1
293_1	68 years, female	57.6
413_1	59 years, female	57.4
286_1	68 years, female	57.3
311_1	78 years, male	57.2
335_1	73 years, female	56.9
356_1	87 years, female	56.9
162_1	79 years, female	56.7
319_1	81 years, male	56.7
9_1	66 years, female	56.4
517_1	88 years, male	56.0
404_1	82 years, female	55.6
447_1	81 years, male	55.5
315_1	62 years, female	55.0
109_1	81 years, female	54.8
229_1	69 years, female	54.8
503_1	68 years, male	54.8
173_1	67 years, male	54.7
351_1	91 years, male	54.3
18_1	88 years, male	54.2
81_1	67 years, male	53.8
384_1	83 years, male	53.1
318_1	68 years, male	52.8
313_1	79 years, female	52.3
353_1	82 years, female	52.3
501_1	88 years, male	52.3
350_1	84 years, female	52.1
2_1	77 years, female	52.0
89_1	63 years, male	51.2
348_1	84 years, male	51.0
314_1	67 years, male	50.7
43_1	64 years, female	50.6
145_1	84 years, male	50.2
320_1	89 years, female	50.1
352_1	62 years, male	49.7
264_1	73 years, female	49.4
379_1	60 years, male	48.9
6_1	73 years, female	48.5
354_1	81 years, female	48.3
394_1	75 years, female	48.3
41_1	94 years, female	48.2
452_1	88 years, female	47.6
316_1	62 years, male	47.1
142_1	61 years, female	47.0
17_1	71 years, male	46.9
119_1	70 years, female	46.6
4_1	88 years, female	45.9
506_1	65 years, male	45.4
396_1	62 years, male	45.3
120_1	70 years, female	45.2
295_1	61 years, female	44.4
288_1	66 years, female	44.3
218_1	71 years, female	42.9
139_1	64 years, female	41.1
322_1	76 years, male	38.7
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RETINA - FANTOM5 CAGEⁱ

Max subtype Scaled Tags Per Millionⁱ Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.	29.7

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 29.7

FF:10030-101E3

24-65 years, mixed

29.7

RETINA - Pig RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	44.0

Pig sample

Sample description

nTPM

Retina
nTPM: 44.0

Samples: 4

Max nTPM: 47.7
Min nTPM: 37.2

Sample A	Female	37.2
Sample B	Female	47.7
Sample C	Male	46.2
Sample D	Male	45.0

RETINA - Mouse RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	77.3

Mouse sample

Sample description

nTPM

Retina
nTPM: 77.3

Samples: 4

Max nTPM: 84.5
Min nTPM: 68.6

Sample A	Male	84.5
Sample B	Male	74.7
Sample C	Female	68.6
Sample D	Female	81.5