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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:944.1 nTPM
HPA Brain:23.0 nTPM
GTEx:944.1 nTPM
FANTOM5:173.9 Scaled Tags Per Million
Pig:332.7 nTPM
Mouse:821.5 nTPM
Allen mouse:13.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA048746
Glial cells Not detected
Neuronal cells Low


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 23.0
2481 Female, age 94, left hemisphere 101.8
1857 Female, age 85, left hemisphere 19.3
2289 Male, age 61, right hemisphere 19.1
1781 Male, age 74, unknown 10.8
2290 Female, age 72, unknown 10.1
2288 Male, age 75, left hemisphere 10.0
1854 Male, age 80, left hemisphere 8.9
2846 Female, age 79, unknown 4.2
Globus pallidus, externus
nTPM: 10.8
1996 Male, age 80, right hemisphere 17.1
2567 Female, age 72, unknown 14.0
2395 Male, age 75, both hemispheres 9.2
2772 Female, age 79, unknown 7.5
2646 Male, age 61, right hemisphere 6.1
Globus pallidus, internus
nTPM: 13.1
2111 Female, age 85, right hemisphere 22.5
2037 Male, age 80, right hemisphere 15.9
2566 Female, age 72, unknown 12.9
2483 Female, age 94, right hemisphere 12.0
2287 Male, age 75, right hemisphere 11.4
1818 Male, age 74, unknown 10.2
2778 Female, age 91, both hemispheres 7.0
Nucleus accumbens
nTPM: 10.7
2732 Male, age 80, right hemisphere 21.3
2391 Female, age 94, left hemisphere 17.1
2824 Male, age 61, right hemisphere 11.2
2698 Female, age 72, unknown 10.0
2286 Male, age 75, left hemisphere 8.1
1856 Female, age 91, right hemisphere 7.2
1783 Male, age 74, unknown 6.9
1806 Female, age 85, left hemisphere 3.8
Nucleus basalis of Meynert
nTPM: 12.2
2393 Male, age 80, right hemisphere 22.7
2484 Female, age 94, left hemisphere 9.8
2821 Male, age 75, both hemispheres 8.5
2569 Male, age 61, both hemispheres 7.7
Nucleus of the diagonal band
nTPM: 9.2
2195 Female, age 85, both hemispheres 14.2
2029 Male, age 61, right hemisphere 11.6
1979 Male, age 74, unknown 8.1
2775 Male, age 80, right hemisphere 7.0
1812 Female, age 91, both hemispheres 4.9
Putamen
nTPM: 12.2
2466 Female, age 79, unknown 28.5
1838 Male, age 80, right hemisphere 17.0
1829 Male, age 74, unknown 11.4
2482 Female, age 94, left hemisphere 9.1
2647 Male, age 75, left hemisphere 8.3
2489 Female, age 72, unknown 7.2
1937 Female, age 91, right hemisphere 3.7
Septal nuclei
nTPM: 11.2
1960 Male, age 74, unknown 31.1
2059 Female, age 85, both hemispheres 12.4
2199 Male, age 80, right hemisphere 12.3
2009 Female, age 91, both hemispheres 8.1
2629 Female, age 94, right hemisphere 5.9
2394 Male, age 61, left hemisphere 5.0
2031 Female, age 72, unknown 3.5
Stria terminalis, bed nucleus
nTPM: 6.8
2201 Male, age 74, unknown 8.9
2486 Female, age 94, both hemispheres 7.4
1974 Female, age 91, both hemispheres 4.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

944.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 777.3
Samples: 246

Max nTPM: 2043.5
Min nTPM: 385.9
Std nTPM: 252.1
Median nTPM: 715.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2043.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1811.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1640.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1604.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1593.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1528.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1526.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1344.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1312.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1289.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1279.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1263.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1262.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1211.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1210.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1200.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1165.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1134.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1133.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1113.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1111.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1109.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1094.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1082.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1081.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1081.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1080.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1079.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1078.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1071.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1057.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1057.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1044.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1034.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1025.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1019.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1001.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 993.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 990.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 987.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 982.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 980.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 975.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 961.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 960.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 958.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 955.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 943.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 943.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 942.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 936.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 936.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 928.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 927.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 922.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 916.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 916.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 915.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 912.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 910.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 904.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 903.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 901.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 897.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 891.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 885.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 883.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 880.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 865.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 861.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 852.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 850.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 849.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 847.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 840.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 833.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 833.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 831.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 829.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 829.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 828.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 826.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 825.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 822.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 821.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 811.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 810.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 809.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 805.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 803.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 803.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 799.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 794.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 790.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 787.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 785.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 782.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 781.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 773.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 773.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 767.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 766.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 765.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 763.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 757.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 754.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 754.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 750.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 748.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 747.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 745.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 742.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 739.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 738.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 738.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 737.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 736.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 732.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 730.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 727.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 724.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 723.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 717.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 714.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 711.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 709.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 702.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 701.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 701.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 694.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 692.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 690.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 685.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 684.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 682.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 680.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 679.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 677.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 677.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 676.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 674.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 673.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 672.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 672.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 670.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 670.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 669.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 668.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 663.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 662.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 662.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 660.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 660.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 657.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 654.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 653.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 651.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 651.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 650.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 649.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 648.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 648.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 648.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 646.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 646.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 645.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 643.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 642.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 640.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 637.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 637.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 633.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 632.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 624.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 619.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 617.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 612.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 611.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 611.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 610.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 603.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 603.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 601.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 599.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 598.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 596.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 591.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 587.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 586.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 586.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 584.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 579.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 579.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 577.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 577.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 577.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 576.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 575.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 573.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 573.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 569.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 569.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 568.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 567.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 567.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 566.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 564.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 563.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 562.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 562.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 559.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 557.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 557.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 555.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 553.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 552.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 552.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 551.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 550.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 548.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 545.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 543.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 536.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 534.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 533.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 526.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 524.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 522.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 520.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 518.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 513.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 500.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 500.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 490.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 487.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 486.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 484.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 484.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 469.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 465.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 441.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 426.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 403.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 388.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 388.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 385.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 944.1
Samples: 246

Max nTPM: 2831.6
Min nTPM: 425.1
Std nTPM: 347.9
Median nTPM: 858.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2831.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2435.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2292.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2282.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1851.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1790.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1771.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1769.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1671.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1654.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1653.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1642.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1621.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1595.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1531.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1531.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1458.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1440.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1436.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1421.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1418.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1409.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1408.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1391.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1378.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1374.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1341.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1321.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1314.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1309.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1307.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1303.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1303.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1294.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1257.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1256.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1250.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1249.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1249.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1237.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1224.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1220.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1219.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1194.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1187.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1186.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1171.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1169.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1158.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1150.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1148.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1145.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1145.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1136.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1128.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1105.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1095.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1088.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1085.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1083.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1077.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1067.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1066.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1064.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1063.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1060.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1057.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1046.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1044.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1042.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1039.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1037.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1032.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1028.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1028.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1027.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1026.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1010.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1010.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1005.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1000.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 999.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 998.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 997.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 993.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 984.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 980.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 977.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 976.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 976.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 975.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 965.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 965.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 960.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 959.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 958.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 955.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 955.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 954.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 949.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 948.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 941.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 933.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 927.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 925.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 924.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 915.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 913.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 907.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 901.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 901.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 900.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 899.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 896.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 880.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 879.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 876.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 875.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 871.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 871.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 867.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 864.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 859.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 856.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 855.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 851.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 850.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 849.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 848.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 848.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 845.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 845.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 841.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 841.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 841.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 839.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 838.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 838.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 834.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 832.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 831.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 829.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 825.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 822.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 821.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 817.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 814.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 814.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 809.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 805.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 804.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 797.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 797.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 793.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 790.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 788.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 784.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 782.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 780.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 779.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 778.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 772.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 770.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 767.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 766.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 763.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 763.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 760.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 759.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 755.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 752.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 749.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 748.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 747.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 746.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 744.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 739.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 733.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 725.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 723.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 719.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 718.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 718.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 715.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 714.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 712.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 710.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 708.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 707.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 705.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 703.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 702.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 700.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 700.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 689.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 685.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 685.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 682.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 680.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 679.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 672.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 671.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 669.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 669.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 665.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 653.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 647.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 644.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 638.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 637.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 634.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 631.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 631.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 623.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 613.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 613.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 608.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 605.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 600.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 599.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 595.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 588.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 587.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 585.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 580.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 579.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 561.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 558.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 558.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 552.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 552.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 543.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 543.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 532.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 527.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 522.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 514.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 513.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 504.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 504.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 503.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 498.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 475.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 469.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 463.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 425.1
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Brain - Putamen (basal ganglia)
Average nTPM: 905.8
Samples: 205

Max nTPM: 2406.2
Min nTPM: 367.5
Std nTPM: 306.2
Median nTPM: 859.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2406.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2105.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2081.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1971.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1951.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1647.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1596.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1513.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1505.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1485.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1455.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1424.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1424.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1415.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1403.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1391.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1370.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1366.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1354.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1315.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1302.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1251.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1243.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1239.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1236.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1231.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1207.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1190.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1175.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1153.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1132.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1119.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1117.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1107.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1098.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1097.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1093.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1087.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1082.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1077.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1076.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1071.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1064.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1063.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1058.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1055.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1044.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1032.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1025.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1022.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1000.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1000.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 998.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 994.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 992.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 990.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 987.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 986.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 984.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 983.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 977.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 973.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 972.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 964.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 963.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 958.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 958.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 953.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 952.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 952.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 951.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 951.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 950.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 942.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 939.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 931.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 928.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 923.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 916.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 914.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 912.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 912.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 912.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 910.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 909.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 908.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 902.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 902.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 900.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 892.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 887.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 884.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 883.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 881.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 873.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 872.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 871.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 871.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 870.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 868.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 865.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 861.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 859.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 857.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 857.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 854.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 854.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 849.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 846.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 845.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 835.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 829.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 822.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 814.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 813.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 812.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 809.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 809.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 790.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 785.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 781.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 776.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 775.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 775.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 770.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 764.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 756.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 753.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 753.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 749.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 748.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 748.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 747.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 744.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 744.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 741.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 741.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 740.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 738.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 736.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 733.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 730.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 729.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 729.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 727.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 722.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 722.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 719.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 716.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 715.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 715.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 703.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 697.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 696.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 693.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 691.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 690.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 689.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 689.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 686.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 682.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 681.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 670.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 667.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 659.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 655.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 653.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 652.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 651.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 649.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 646.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 645.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 638.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 635.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 633.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 630.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 629.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 627.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 626.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 621.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 621.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 621.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 619.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 616.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 616.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 613.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 606.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 605.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 602.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 595.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 593.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 584.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 582.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 578.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 573.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 570.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 547.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 538.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 529.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 528.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 518.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 500.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 486.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 474.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 367.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

173.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 105.2
FF:10164-103B2 76 years, female 105.2
Nucleus accumbens
Scaled Tags Per Million: 102.8
FF:10037-101F1 23-56 years, mixed 102.8
Putamen
Scaled Tags Per Million: 102.5
FF:10176-103C5 60 years, female 102.5
Globus pallidus
Scaled Tags Per Million: 173.9
FF:10175-103C4 60 years, female 237.7
FF:10161-103A8 76 years, female 110.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

332.7
Pig sample Sample description nTPM
Caudate
nTPM: 248.3
Samples: 4

Max nTPM: 266.1
Min nTPM: 214.0
Sample A Female 266.1
Sample B Female 257.7
Sample C Male 255.4
Sample D Male 214.0
Putamen
nTPM: 332.7
Samples: 4

Max nTPM: 464.1
Min nTPM: 227.7
Sample A Female 464.1
Sample B Female 227.7
Sample C Male 334.5
Sample D Male 304.5
Septum
nTPM: 295.7
Samples: 4

Max nTPM: 414.8
Min nTPM: 245.8
Sample A Female 414.8
Sample B Female 264.0
Sample C Male 258.3
Sample D Male 245.8
Ventral pallidum
nTPM: 267.6
Samples: 4

Max nTPM: 317.7
Min nTPM: 240.6
Sample A Female 252.7
Sample B Female 317.7
Sample C Male 240.6
Sample D Male 259.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

821.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 821.5
Samples: 4

Max nTPM: 873.6
Min nTPM: 767.7
Sample A Male 778.4
Sample B Male 873.6
Sample C Female 767.7
Sample D Female 866.4
Septum
nTPM: 815.4
Samples: 4

Max nTPM: 928.6
Min nTPM: 699.6
Sample A Male 699.6
Sample B Male 928.6
Sample C Female 890.1
Sample D Female 743.1
Ventral forebrain
nTPM: 776.4
Samples: 4

Max nTPM: 1003.8
Min nTPM: 675.8
Sample A Male 679.1
Sample B Male 746.7
Sample C Female 1003.8
Sample D Female 675.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.9
68563128 Antisense, RP_050125_01_B08, Mouse strain C57BL/6J (56 days, male) 13.9
Pallidum
Expression energy: 13.3
68563128 Antisense, RP_050125_01_B08, Mouse strain C57BL/6J (56 days, male) 13.3

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