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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:96.4 nTPM
HPA Brain:355.7 nTPM
GTEx:96.4 nTPM
FANTOM5:199.8 Scaled Tags Per Million
Pig:63.6 nTPM
Mouse:191.3 nTPM
Allen mouse:12.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036575Antibody HPA036576
Glial cells MediumMedium
Neuronal cells MediumLow




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

355.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 207.2
2288 Male, age 75, left hemisphere 319.8
1781 Male, age 74, unknown 246.0
2846 Female, age 79, unknown 222.4
2290 Female, age 72, unknown 196.5
2289 Male, age 61, right hemisphere 187.9
1854 Male, age 80, left hemisphere 173.0
2481 Female, age 94, left hemisphere 159.8
1857 Female, age 85, left hemisphere 152.0
Globus pallidus, externus
nTPM: 355.7
2567 Female, age 72, unknown 451.8
2646 Male, age 61, right hemisphere 381.6
1996 Male, age 80, right hemisphere 326.0
2395 Male, age 75, both hemispheres 315.1
2772 Female, age 79, unknown 304.0
Globus pallidus, internus
nTPM: 337.9
2111 Female, age 85, right hemisphere 461.8
2566 Female, age 72, unknown 406.4
2287 Male, age 75, right hemisphere 387.8
2778 Female, age 91, both hemispheres 347.7
1818 Male, age 74, unknown 280.3
2037 Male, age 80, right hemisphere 267.4
2483 Female, age 94, right hemisphere 214.2
Nucleus accumbens
nTPM: 235.4
2286 Male, age 75, left hemisphere 295.4
2391 Female, age 94, left hemisphere 272.5
2698 Female, age 72, unknown 252.0
2732 Male, age 80, right hemisphere 246.0
1783 Male, age 74, unknown 239.8
2824 Male, age 61, right hemisphere 221.2
1806 Female, age 85, left hemisphere 196.4
1856 Female, age 91, right hemisphere 160.1
Nucleus basalis of Meynert
nTPM: 252.9
2569 Male, age 61, both hemispheres 339.2
2821 Male, age 75, both hemispheres 269.0
2484 Female, age 94, left hemisphere 215.4
2393 Male, age 80, right hemisphere 188.1
Nucleus of the diagonal band
nTPM: 240.8
2029 Male, age 61, right hemisphere 341.4
2195 Female, age 85, both hemispheres 234.2
1812 Female, age 91, both hemispheres 219.3
2775 Male, age 80, right hemisphere 218.4
1979 Male, age 74, unknown 190.9
Putamen
nTPM: 244.0
2647 Male, age 75, left hemisphere 388.9
1829 Male, age 74, unknown 274.0
2489 Female, age 72, unknown 263.6
2482 Female, age 94, left hemisphere 225.9
1937 Female, age 91, right hemisphere 212.3
2466 Female, age 79, unknown 203.4
1838 Male, age 80, right hemisphere 140.0
Septal nuclei
nTPM: 243.2
1960 Male, age 74, unknown 290.7
2629 Female, age 94, right hemisphere 288.1
2394 Male, age 61, left hemisphere 270.6
2031 Female, age 72, unknown 239.5
2059 Female, age 85, both hemispheres 233.0
2009 Female, age 91, both hemispheres 209.2
2199 Male, age 80, right hemisphere 171.1
Stria terminalis, bed nucleus
nTPM: 281.7
2486 Female, age 94, both hemispheres 316.0
1974 Female, age 91, both hemispheres 296.4
2201 Male, age 74, unknown 232.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.4
Samples: 246

Max nTPM: 178.3
Min nTPM: 28.5
Std nTPM: 26.1
Median nTPM: 83.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 178.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 169.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 163.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 154.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 139.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 136.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 135.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 135.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 132.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 132.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 130.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 127.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 126.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 125.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 124.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 122.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 122.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 121.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 120.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 120.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 120.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 119.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 119.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 119.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 118.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 117.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 117.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 117.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 117.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 116.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 115.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 115.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 115.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 113.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 113.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 112.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 112.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 111.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 110.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 108.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 108.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 108.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 107.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 106.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 105.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 105.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 105.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 105.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 104.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 104.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 103.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 103.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 103.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 103.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 103.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 102.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 102.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 102.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 101.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 101.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 101.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 100.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 100.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 100.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 100.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 100.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 100.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 100.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 99.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 99.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 98.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 97.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 97.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 97.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 96.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 96.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 95.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 95.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 95.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 94.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 94.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 93.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 93.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 93.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 93.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 93.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 92.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 92.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 91.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 91.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 91.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 91.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 91.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 91.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 90.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 90.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 90.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 90.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 90.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 90.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 89.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 88.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 88.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 88.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 88.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 87.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 87.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 87.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 86.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 86.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 86.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 86.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 86.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 86.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 85.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 85.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 85.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 85.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 84.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 84.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 84.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 83.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 83.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 82.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 82.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 80.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 80.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 80.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 80.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 80.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 80.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 80.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 80.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 79.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 79.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 79.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 78.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 77.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 77.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 76.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 75.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 75.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 75.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 75.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 74.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 74.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 74.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 74.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 74.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 73.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 73.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 73.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 73.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 73.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 72.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 72.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 72.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 71.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 71.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 71.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 71.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 70.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 70.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 70.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 69.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 69.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 69.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 69.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 69.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 69.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 68.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 68.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 66.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 65.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 64.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 64.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 64.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 64.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 63.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 63.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 62.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 62.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 62.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 62.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 62.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 61.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 59.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 59.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 57.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 56.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 56.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 55.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 55.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 55.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 54.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 54.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 54.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 54.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 54.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 53.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 53.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 52.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 52.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 51.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 50.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 50.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 50.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 49.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 48.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 47.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 46.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 45.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 45.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 44.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 42.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 41.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 41.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 38.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 37.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 37.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 30.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 30.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 28.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 77.0
Samples: 246

Max nTPM: 239.3
Min nTPM: 15.7
Std nTPM: 26.1
Median nTPM: 79.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 239.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 164.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 140.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 133.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 124.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 121.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 118.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 118.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 116.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 115.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 114.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 114.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 114.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 113.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 113.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 112.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 110.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 109.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 109.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 108.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 108.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 108.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 107.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 106.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 105.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 105.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 105.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 104.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 104.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 103.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 101.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 101.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 100.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 100.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 99.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 99.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 99.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 99.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 99.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 98.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 98.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 97.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 97.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 96.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 96.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 96.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 95.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 94.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 94.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 94.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 94.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 94.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 94.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 94.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 93.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 93.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 92.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 92.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 92.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 92.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 91.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 91.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 91.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 91.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 91.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 91.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 91.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 91.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 90.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 90.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 89.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 89.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 89.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 89.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 88.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 88.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 88.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 88.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 87.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 87.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 87.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 87.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 87.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 87.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 87.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 87.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 86.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 86.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 86.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 86.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 86.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 86.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 86.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 85.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 85.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 85.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 85.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 85.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 85.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 85.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 84.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 84.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 84.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 84.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 84.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 84.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 83.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 83.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 83.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 83.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 82.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 82.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 82.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 82.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 82.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 81.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 81.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 81.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 81.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 80.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 79.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 79.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 79.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 79.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 79.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 78.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 78.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 78.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 77.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 77.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 77.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 77.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 76.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 75.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 75.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 75.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 75.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 75.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 74.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 74.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 74.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 73.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 73.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 73.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 73.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 72.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 72.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 72.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 72.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 72.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 72.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 72.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 72.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 71.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 71.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 70.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 70.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 70.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 70.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 69.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 69.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 68.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 68.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 67.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 67.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 66.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 65.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 65.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 64.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 64.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 64.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 64.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 63.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 63.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 62.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 62.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 61.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 61.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 61.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 61.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 61.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 60.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 60.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 60.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 60.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 59.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 59.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 58.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 58.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 57.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 55.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 55.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 54.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 54.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 53.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 53.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 52.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 51.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 51.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 51.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 50.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 50.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 49.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 49.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 49.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 49.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 48.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 47.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 46.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 46.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 45.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 45.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 44.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 43.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 43.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 43.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 42.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 41.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 41.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 40.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 40.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 39.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 39.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 37.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 37.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 36.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 36.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 36.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 36.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 35.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 33.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 33.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 32.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 32.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 32.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 32.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 25.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 23.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 17.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 17.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 15.7
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Brain - Putamen (basal ganglia)
Average nTPM: 96.4
Samples: 205

Max nTPM: 242.5
Min nTPM: 29.0
Std nTPM: 31.6
Median nTPM: 94.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 242.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 206.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 176.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 164.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 163.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 163.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 158.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 157.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 152.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 149.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 149.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 149.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 147.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 144.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 143.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 142.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 141.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 140.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 140.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 137.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 137.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 136.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 134.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 132.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 132.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 132.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 131.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 131.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 128.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 126.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 125.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 124.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 124.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 123.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 123.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 123.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 122.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 120.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 119.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 119.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 119.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 119.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 117.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 117.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 117.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 116.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 116.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 116.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 115.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 115.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 115.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 115.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 115.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 115.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 114.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 114.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 113.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 111.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 111.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 111.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 110.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 110.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 109.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 109.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 109.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 108.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 108.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 108.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 108.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 107.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 107.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 107.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 107.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 106.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 106.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 105.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 104.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 104.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 104.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 103.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 103.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 103.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 103.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 103.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 102.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 101.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 100.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 99.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 99.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 99.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 98.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 97.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 96.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 96.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 96.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 95.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 95.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 94.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 94.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 94.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 94.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 94.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 94.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 93.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 93.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 93.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 92.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 92.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 92.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 90.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 90.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 89.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 89.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 89.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 89.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 89.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 87.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 87.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 86.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 86.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 86.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 86.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 85.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 84.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 84.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 84.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 83.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 83.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 83.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 83.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 83.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 83.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 82.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 82.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 81.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 81.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 81.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 81.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 80.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 80.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 79.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 79.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 78.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 78.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 78.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 78.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 77.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 77.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 77.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 76.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 76.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 76.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 75.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 75.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 75.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 74.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 73.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 73.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 73.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 72.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 71.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 71.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 71.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 70.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 70.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 69.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 68.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 66.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 66.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 65.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 64.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 64.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 64.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 64.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 63.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 62.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 61.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 61.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 60.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 60.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 59.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 58.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 57.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 57.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 57.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 57.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 57.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 57.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 54.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 52.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 50.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 49.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 48.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 47.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 42.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 41.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 40.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 40.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 30.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 29.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

199.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 24.7
FF:10164-103B2 76 years, female 24.7
Nucleus accumbens
Scaled Tags Per Million: 199.8
FF:10037-101F1 23-56 years, mixed 199.8
Putamen
Scaled Tags Per Million: 110.9
FF:10176-103C5 60 years, female 110.9
Globus pallidus
Scaled Tags Per Million: 127.3
FF:10175-103C4 60 years, female 224.4
FF:10161-103A8 76 years, female 30.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.6
Pig sample Sample description nTPM
Caudate
nTPM: 38.7
Samples: 4

Max nTPM: 44.8
Min nTPM: 33.8
Sample A Female 33.8
Sample B Female 39.7
Sample C Male 44.8
Sample D Male 36.4
Putamen
nTPM: 63.7
Samples: 4

Max nTPM: 83.7
Min nTPM: 44.6
Sample A Female 83.7
Sample B Female 44.6
Sample C Male 55.9
Sample D Male 70.4
Septum
nTPM: 48.7
Samples: 4

Max nTPM: 60.0
Min nTPM: 40.0
Sample A Female 48.9
Sample B Female 40.0
Sample C Male 60.0
Sample D Male 45.7
Ventral pallidum
nTPM: 60.2
Samples: 4

Max nTPM: 94.1
Min nTPM: 33.3
Sample A Female 33.3
Sample B Female 49.0
Sample C Male 94.1
Sample D Male 64.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 191.3
Samples: 4

Max nTPM: 210.8
Min nTPM: 175.7
Sample A Male 182.9
Sample B Male 175.7
Sample C Female 210.8
Sample D Female 195.9
Septum
nTPM: 154.4
Samples: 4

Max nTPM: 174.1
Min nTPM: 130.3
Sample A Male 164.2
Sample B Male 130.3
Sample C Female 148.8
Sample D Female 174.1
Ventral forebrain
nTPM: 158.2
Samples: 4

Max nTPM: 173.4
Min nTPM: 140.9
Sample A Male 170.4
Sample B Male 148.1
Sample C Female 140.9
Sample D Female 173.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.6
74724775 Antisense, RP_060220_04_B09, Mouse strain C57BL/6J (56 days, male) 13.4
69407355 Antisense, RP_050414_01_D12, Mouse strain C57BL/6J (56 days, male) 11.8
Pallidum
Expression energy: 12.9
74724775 Antisense, RP_060220_04_B09, Mouse strain C57BL/6J (56 days, male) 13.4
69407355 Antisense, RP_050414_01_D12, Mouse strain C57BL/6J (56 days, male) 12.4

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