PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:329.3 nTPM
FANTOM5:208.5 Scaled Tags Per Million
Pig:71.4 nTPM
Mouse:174.9 nTPM
Allen mouse:9.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 329.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 231.2
2188 Female, age 91, both hemispheres 281.5
2301 Female, age 85, both hemispheres 251.2
2090 Male, age 80, both hemispheres 234.9
1984 Male, age 76, both hemispheres 157.4
Area postrema
nTPM: 206.3
2306 Male, age 80, both hemispheres 268.3
2054 Male, age 76, both hemispheres 186.7
2799 Male, age 61, both hemispheres 163.8
Dorsal cochlear nucleus
nTPM: 242.1
2058 Male, age 76, both hemispheres 250.5
2802 Male, age 74, right hemisphere 247.4
2370 Male, age 61, both hemispheres 246.8
2187 Female, age 91, both hemispheres 245.6
2378 Male, age 80, both hemispheres 220.2
Dorsal medullary reticular nucleus
nTPM: 283.6
2373 Male, age 61, both hemispheres 310.1
2040 Female, age 85, both hemispheres 272.3
2088 Male, age 76, both hemispheres 268.2
Dorsal motor vagal complex
nTPM: 241.6
2185 Male, age 76, both hemispheres 328.1
2643 Male, age 74, both hemispheres 278.2
2133 Female, age 91, both hemispheres 246.7
2000 Male, age 74, unknown 227.6
2807 Female, age 85, both hemispheres 223.8
2797 Male, age 61, both hemispheres 223.7
2844 Male, age 55, unknown 204.8
2813 Female, age 72, unknown 199.6
Dorsal tegmental nucleus
nTPM: 221.7
2083 Male, age 80, both hemispheres 291.0
2326 Male, age 74, both hemispheres 219.4
1936 Male, age 76, left hemisphere 200.9
2358 Male, age 61, both hemispheres 175.5
Dorsolateral tegmental area
nTPM: 216.5
2654 Male, age 80, both hemispheres 265.0
2751 Female, age 85, both hemispheres 247.2
2141 Male, age 76, both hemispheres 200.2
2337 Male, age 61, both hemispheres 194.3
2360 Male, age 74, both hemispheres 175.7
Gigantocellular reticular nuclei, medullary
nTPM: 272.2
2310 Male, age 80, both hemispheres 290.0
2462 Male, age 74, both hemispheres 288.5
2387 Female, age 91, both hemispheres 286.1
2022 Male, age 76, right hemisphere 278.4
1876 Female, age 85, both hemispheres 253.6
2314 Male, age 61, both hemispheres 236.7
Gigantocellular reticular nuclei, pars
nTPM: 290.2
2168 Male, age 76, both hemispheres 317.1
2336 Male, age 61, both hemispheres 299.3
2330 Male, age 80, both hemispheres 291.4
2706 Male, age 80, both hemispheres 283.4
2084 Female, age 85, both hemispheres 260.2
Inferior olive
nTPM: 210.3
2628 Female, age 91, both hemispheres 278.0
2178 Male, age 61, both hemispheres 225.2
2085 Female, age 85, both hemispheres 210.8
2379 Male, age 80, both hemispheres 170.7
2563 Male, age 74, both hemispheres 166.5
Kolliker-Fuse nucleus
nTPM: 247.1
2793 Female, age 91, left hemisphere 353.0
2163 Male, age 80, both hemispheres 233.8
2315 Male, age 76, right hemisphere 154.5
Lateral lemniscal nuclei
nTPM: 313.7
2320 Female, age 91, left hemisphere 347.1
2453 Male, age 74, right hemisphere 320.1
2169 Male, age 76, both hemispheres 310.8
2746 Female, age 85, left hemisphere 301.1
2036 Male, age 80, both hemispheres 289.4
Lateral medullary reticular nucleus
nTPM: 241.5
2044 Male, age 76, both hemispheres 278.2
2852 Male, age 80, both hemispheres 275.9
2374 Male, age 61, both hemispheres 266.3
2190 Female, age 85, both hemispheres 246.7
2804 Female, age 91, both hemispheres 191.1
2305 Male, age 74, both hemispheres 190.6
Lateral parabrachial nucleus
nTPM: 276.1
2790 Male, age 61, both hemispheres 283.7
2013 Male, age 80, both hemispheres 282.4
2792 Male, age 76, both hemispheres 269.6
2139 Female, age 85, right hemisphere 268.7
Lateral vestibular nucleus
nTPM: 243.2
2184 Male, age 76, both hemispheres 266.0
2311 Male, age 80, both hemispheres 220.4
Locus coeruleus
nTPM: 220.7
2162 Male, age 80, both hemispheres 261.4
2720 Male, age 74, both hemispheres 258.8
2317 Female, age 72, unknown 230.9
2123 Female, age 91, both hemispheres 207.1
2014 Male, age 55, unknown 200.4
2788 Male, age 74, unknown 194.8
1980 Male, age 76, both hemispheres 191.5
Medial olivary nucleus
nTPM: 211.5
2851 Male, age 80, both hemispheres 251.7
1943 Male, age 61, both hemispheres 240.1
2138 Female, age 91, both hemispheres 195.8
1962 Male, age 76, both hemispheres 158.4
Medial parabrachial nucleus
nTPM: 245.0
2786 Male, age 76, both hemispheres 265.4
2156 Male, age 61, both hemispheres 264.4
2854 Male, age 80, both hemispheres 244.5
2463 Female, age 85, right hemisphere 237.2
2170 Female, age 91, both hemispheres 213.6
Medial periolivary nuclei
nTPM: 291.5
2081 Male, age 80, both hemispheres 309.1
2063 Male, age 76, both hemispheres 308.9
2458 Female, age 91, both hemispheres 307.9
2171 Female, age 85, both hemispheres 287.8
2791 Male, age 74, right hemisphere 243.6
Medial vestibular nucleus
nTPM: 221.1
2803 Female, age 91, both hemispheres 266.8
2093 Male, age 80, both hemispheres 246.2
2624 Male, age 61, both hemispheres 219.3
2801 Male, age 74, both hemispheres 202.4
2743 Female, age 85, both hemispheres 199.6
2134 Male, age 76, both hemispheres 192.3
Motor facial nucleus
nTPM: 304.4
2327 Male, age 80, both hemispheres 330.4
2697 Female, age 85, both hemispheres 329.0
2062 Male, age 76, both hemispheres 311.6
2795 Female, age 91, both hemispheres 290.4
2365 Male, age 74, right hemisphere 288.9
2126 Male, age 61, both hemispheres 276.2
Motor hypoglossal nucleus
nTPM: 254.0
2132 Female, age 85, both hemispheres 307.9
2182 Male, age 80, both hemispheres 283.5
2125 Female, age 91, both hemispheres 283.1
2461 Male, age 61, both hemispheres 214.0
2277 Male, age 76, both hemispheres 181.4
Motor trigeminal nucleus
nTPM: 287.8
2560 Male, age 74, both hemispheres 317.8
2079 Male, age 80, both hemispheres 303.9
2321 Female, age 91, both hemispheres 292.7
2309 Male, age 76, both hemispheres 263.6
2335 Male, age 61, both hemispheres 261.1
Nuclei of the trapezoid body
nTPM: 296.6
2166 Male, age 80, both hemispheres 322.4
2368 Female, age 91, both hemispheres 305.3
2159 Male, age 61, both hemispheres 303.9
2735 Female, age 85, both hemispheres 280.4
1983 Male, age 76, both hemispheres 271.2
Nucleus ambiguus
nTPM: 329.3
2096 Female, age 85, both hemispheres 400.9
2071 Male, age 76, both hemispheres 257.6
Nucleus cuneatus
nTPM: 243.2
2100 Male, age 76, both hemispheres 270.9
2805 Female, age 91, both hemispheres 260.7
2131 Male, age 76, both hemispheres 258.7
2562 Male, age 61, both hemispheres 258.1
2381 Male, age 80, both hemispheres 236.1
2380 Male, age 80, both hemispheres 227.4
2564 Male, age 74, both hemispheres 227.4
2376 Male, age 61, both hemispheres 226.9
2808 Female, age 85, both hemispheres 222.9
Nucleus gracilis
nTPM: 270.1
2382 Male, age 80, both hemispheres 297.4
2299 Female, age 85, both hemispheres 273.1
2627 Male, age 74, both hemispheres 239.8
Nucleus raphe magnus
nTPM: 306.5
2459 Female, age 91, both hemispheres 365.7
2328 Male, age 80, both hemispheres 335.8
2051 Male, age 76, both hemispheres 299.8
2172 Female, age 85, both hemispheres 298.4
2455 Male, age 74, both hemispheres 283.3
2160 Male, age 61, both hemispheres 255.9
Nucleus raphe obscurus
nTPM: 243.7
2800 Male, age 61, midline 276.4
2845 Female, age 85, midline 237.0
2142 Male, age 76, midline 217.7
Nucleus raphe pallidus
nTPM: 217.9
2183 Male, age 80, midline 241.6
1924 Male, age 61, midline 222.1
2145 Male, age 76, midline 189.9
Nucleus tractus solitarii
nTPM: 187.5
2656 Male, age 76, both hemispheres 229.9
2307 Male, age 80, both hemispheres 224.9
2191 Female, age 85, both hemispheres 175.6
2144 Female, age 91, right hemisphere 119.4
Paramedian reticular nucleus
nTPM: 243.2
2057 Male, age 80, both hemispheres 270.6
2313 Male, age 61, both hemispheres 261.4
2050 Female, age 85, both hemispheres 261.2
2052 Male, age 76, both hemispheres 179.6
Parvicellular reticular nuclei
nTPM: 272.9
2558 Male, age 74, both hemispheres 339.5
2095 Male, age 76, both hemispheres 244.4
2119 Male, age 80, both hemispheres 234.9
Parvicellular reticular nuclei, medullary
nTPM: 261.4
2189 Female, age 91, both hemispheres 275.9
2181 Male, age 80, left hemisphere 271.6
2091 Female, age 85, both hemispheres 236.7
Pedunculopontine tegmental nucleus
nTPM: 225.2
2334 Male, age 80, both hemispheres 246.7
1921 Female, age 85, both hemispheres 227.6
2338 Male, age 61, both hemispheres 201.1
Peritrigeminal nucleus
nTPM: 232.9
2179 Male, age 61, both hemispheres 245.9
2136 Male, age 76, both hemispheres 227.9
2067 Female, age 85, both hemispheres 225.0
Pontine nuclei
nTPM: 309.6
2787 Female, age 85, both hemispheres 353.6
1968 Male, age 76, left hemisphere 334.1
2454 Male, age 74, left hemisphere 329.5
2115 Male, age 80, left hemisphere 329.2
1863 Male, age 55, unknown 304.3
2319 Female, age 91, both hemispheres 288.5
2109 Female, age 72, unknown 281.4
2727 Male, age 61, right hemisphere 256.0
Pontine raphe nucleus
nTPM: 262.5
2122 Female, age 85, midline 275.7
2853 Male, age 76, midline 249.3
Posteroventral cochlear nucleus
nTPM: 245.7
2070 Male, age 76, both hemispheres 296.5
2752 Female, age 85, both hemispheres 255.6
2135 Female, age 91, both hemispheres 250.1
2371 Male, age 61, both hemispheres 224.1
2341 Male, age 80, both hemispheres 202.4
Prepositus hypoglossal nucleus
nTPM: 198.8
2086 Male, age 80, both hemispheres 200.5
2855 Female, age 85, right hemisphere 197.1
Principal sensory trigeminal nucleus
nTPM: 270.3
2367 Female, age 91, left hemisphere 318.6
2158 Male, age 61, both hemispheres 272.7
2008 Male, age 80, left hemisphere 263.7
2324 Male, age 76, both hemispheres 226.4
Reticular pontine nucleus, caudal
nTPM: 319.2
2457 Female, age 91, both hemispheres 367.4
2332 Male, age 80, right hemisphere 352.3
2092 Male, age 76, both hemispheres 285.4
2559 Male, age 74, both hemispheres 271.7
Reticular pontine nucleus, oral
nTPM: 292.1
2366 Female, age 91, both hemispheres 361.1
2361 Male, age 74, both hemispheres 292.0
2167 Male, age 76, both hemispheres 283.8
2012 Female, age 85, both hemispheres 270.8
1939 Male, age 80, both hemispheres 252.9
Reticulotegmental nucleus
nTPM: 278.1
2452 Male, age 74, both hemispheres 309.0
2322 Female, age 91, both hemispheres 287.4
2333 Male, age 80, both hemispheres 286.4
2325 Male, age 76, both hemispheres 229.6
Spinal trigeminal nucleus, caudal
nTPM: 270.3
2308 Male, age 80, both hemispheres 287.5
2642 Male, age 74, both hemispheres 277.5
2312 Male, age 61, both hemispheres 267.4
2447 Male, age 76, both hemispheres 267.4
2390 Female, age 91, both hemispheres 251.9
Spinal trigeminal nucleus, interpolar
nTPM: 243.2
2389 Female, age 91, both hemispheres 285.9
2386 Female, age 85, both hemispheres 254.5
2066 Male, age 76, right hemisphere 252.2
2033 Male, age 80, both hemispheres 241.5
2625 Male, age 61, both hemispheres 181.9
Spinal trigeminal nucleus, oral
nTPM: 249.7
1978 Male, age 76, both hemispheres 299.6
2164 Male, age 80, both hemispheres 246.5
2737 Female, age 85, both hemispheres 203.2
Spinal vestibular nucleus
nTPM: 280.4
2748 Male, age 76, both hemispheres 334.1
2186 Female, age 91, both hemispheres 314.3
2384 Male, age 74, both hemispheres 286.4
2780 Male, age 80, both hemispheres 267.2
2806 Female, age 85, both hemispheres 254.4
2796 Male, age 61, both hemispheres 226.2
Subcoeruleus area
nTPM: 268.8
2089 Male, age 76, left hemisphere 324.8
2369 Female, age 85, left hemisphere 272.8
2451 Male, age 74, both hemispheres 259.9
2323 Female, age 91, left hemisphere 251.8
1958 Male, age 80, both hemispheres 234.7
Superior olive
nTPM: 296.5
2329 Male, age 80, right hemisphere 331.1
2561 Female, age 91, both hemispheres 327.0
2020 Male, age 76, both hemispheres 297.5
1875 Female, age 85, both hemispheres 283.4
2364 Male, age 74, right hemisphere 243.6
Superior vestibular nucleus
nTPM: 185.2
2015 Male, age 80, both hemispheres 204.1
2061 Male, age 76, both hemispheres 201.7
2383 Male, age 74, both hemispheres 149.9
Ventral medullary reticular nucleus
nTPM: 307.3
2060 Male, age 76, both hemispheres 355.3
2372 Male, age 61, both hemispheres 259.2
Ventral periolivary nuclei
nTPM: 275.8
2165 Male, age 80, both hemispheres 297.5
2130 Female, age 85, both hemispheres 286.6
2794 Female, age 91, left hemisphere 268.5
2023 Male, age 76, both hemispheres 250.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 244.4
2118 Male, age 80, both hemispheres 270.6
1986 Male, age 76, both hemispheres 243.1
2180 Male, age 61, both hemispheres 242.1
2741 Female, age 85, both hemispheres 240.5
2302 Female, age 91, both hemispheres 225.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 292.4
2456 Female, age 91, both hemispheres 324.2
2161 Male, age 80, both hemispheres 308.9
1959 Male, age 76, both hemispheres 300.7
2449 Male, age 74, both hemispheres 300.1
2840 Female, age 85, both hemispheres 270.7
2359 Male, age 61, both hemispheres 250.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 208.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 78.5
FF:10182-103D2 60 years, female 138.6
FF:10165-103B3 76 years, female 18.3
Medulla oblongata
Scaled Tags Per Million: 81.4
FF:10038-101F2 18-64 years, mixed 174.9
FF:10174-103C3 60 years, female 56.0
FF:10155-103A2 76 years, female 13.2
Pons
Scaled Tags Per Million: 208.5
FF:10033-101E6 18-54 years, mixed 208.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 71.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 65.9
Samples: 4

Max nTPM: 74.3
Min nTPM: 52.5
Sample A Female 69.2
Sample B Female 67.5
Sample C Male 74.3
Sample D Male 52.5
Pons
nTPM: 71.4
Samples: 4

Max nTPM: 88.6
Min nTPM: 57.8
Sample A Female 88.6
Sample B Female 57.8
Sample C Male 68.2
Sample D Male 70.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 174.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 174.9
Samples: 4

Max nTPM: 182.7
Min nTPM: 169.5
Sample A Male 169.5
Sample B Male 174.5
Sample C Female 172.9
Sample D Female 182.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.3
74724775 Antisense, RP_060220_04_B09, Mouse strain C57BL/6J (56 days, male) 9.2
69407355 Antisense, RP_050414_01_D12, Mouse strain C57BL/6J (56 days, male) 7.4
Pons
Expression energy: 9.3
74724775 Antisense, RP_060220_04_B09, Mouse strain C57BL/6J (56 days, male) 10.7
69407355 Antisense, RP_050414_01_D12, Mouse strain C57BL/6J (56 days, male) 7.9

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