HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:154.6 nTPM
HPA Brain:77.7 nTPM
GTEx:154.6 nTPM
FANTOM5:313.6 Scaled Tags Per Million
Pig:28.8 nTPM
Mouse:210.9 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036487
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 77.7
Sample id Sample description nTPM
Hippocampus
nTPM: 77.4
1898 Male, age 80, left hemisphere 91.2
2529 Female, age 94, left hemisphere 80.9
2621 Female, age 67, right hemisphere 80.5
1855 Male, age 76, left hemisphere 77.5
2148 Female, age 91, left hemisphere 68.0
1911 Female, age 85, right hemisphere 66.3
Dentate gyrus
nTPM: 73.6
2010 Male, age 76, both hemispheres 90.5
2530 Female, age 94, left hemisphere 81.4
2246 Female, age 85, both hemispheres 80.7
1927 Female, age 91, both hemispheres 73.7
2531 Female, age 67, both hemispheres 60.2
2528 Male, age 74, both hemispheres 54.8
Entorhinal gyrus
nTPM: 67.4
1938 Female, age 85, left hemisphere 82.4
2764 Male, age 80, right hemisphere 72.9
1787 Male, age 76, left hemisphere 69.1
2117 Female, age 91, right hemisphere 67.2
2686 Male, age 75, right hemisphere 59.9
2613 Female, age 94, left hemisphere 53.1
Hippocampus, CA1
nTPM: 77.7
2749 Male, age 80, left hemisphere 101.7
2527 Male, age 74, both hemispheres 78.2
1873 Female, age 85, both hemispheres 75.5
2045 Male, age 76, both hemispheres 69.2
2082 Female, age 91, right hemisphere 63.9
Hippocampus, CA2
nTPM: 71.6
1892 Male, age 76, both hemispheres 84.4
2249 Male, age 74, both hemispheres 78.7
1963 Male, age 80, left hemisphere 74.1
1940 Female, age 85, left hemisphere 68.8
2113 Female, age 91, right hemisphere 62.1
2437 Female, age 94, left hemisphere 61.7
Hippocampus, CA3
nTPM: 69.0
2137 Male, age 80, left hemisphere 80.8
2436 Male, age 74, both hemispheres 77.0
1867 Male, age 76, both hemispheres 73.5
1891 Female, age 85, both hemispheres 68.2
2620 Female, age 94, left hemisphere 61.9
2861 Female, age 67, both hemispheres 52.5
Parahippocampal cortex
nTPM: 72.4
2245 Female, age 91, both hemispheres 80.8
1850 Male, age 80, both hemispheres 80.1
2532 Female, age 72, left hemisphere 80.0
2018 Male, age 76, both hemispheres 76.0
1933 Female, age 85, both hemispheres 75.6
2250 Female, age 67, right hemisphere 74.0
1990 Female, age 91, right hemisphere 70.7
2692 Male, age 74, both hemispheres 64.4
2693 Female, age 94, both hemispheres 63.1
2622 Female, age 67, right hemisphere 59.8
Perirhinal gyrus
nTPM: 74.4
1794 Male, age 80, right hemisphere 81.1
1841 Female, age 85, right hemisphere 74.8
2521 Female, age 94, right hemisphere 74.8
1847 Female, age 91, left hemisphere 73.9
2848 Male, age 76, right hemisphere 67.5
Subiculum
nTPM: 72.0
2438 Female, age 94, left hemisphere 89.7
1901 Male, age 80, both hemispheres 76.1
2042 Male, age 76, both hemispheres 71.7
1977 Female, age 85, both hemispheres 70.5
2619 Male, age 74, both hemispheres 67.7
2729 Female, age 91, right hemisphere 56.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 154.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 154.6
Samples: 197

Max nTPM: 417.6
Min nTPM: 98.9
Std nTPM: 36.3
Median nTPM: 148.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 417.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 270.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 246.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 235.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 234.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 229.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 228.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 220.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 215.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 214.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 214.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 313.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 313.6
FF:10169-103B7 60 years, female 461.1
FF:10153-102I9 76 years, female 166.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.8
Pig sample Sample description nTPM
Subiculum
nTPM: 27.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 26.0
Sample A Female 29.5
Sample B Female 26.0
Sample C Male 28.0
Sample D Male 27.0
Dorsal hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 34.7
Min nTPM: 23.9
Sample A Female 34.7
Sample B Female 28.3
Sample C Male 28.4
Sample D Male 23.9
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 31.0
Min nTPM: 26.4
Sample A Female 31.0
Sample B Female 27.8
Sample C Male 26.4
Sample D Male 26.6
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 33.5
Min nTPM: 22.9
Sample A Female 33.5
Sample B Female 25.9
Sample C Male 27.3
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 210.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 197.0
Samples: 4

Max nTPM: 218.7
Min nTPM: 182.1
Sample A Male 182.1
Sample B Male 201.9
Sample C Female 218.7
Sample D Female 185.1
Hippocampal formation
nTPM: 210.9
Samples: 4

Max nTPM: 250.5
Min nTPM: 190.5
Sample A Male 250.5
Sample B Male 190.5
Sample C Female 197.6
Sample D Female 204.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68861975 Antisense, RP_050301_01_C05, Mouse strain C57BL/6J (56 days, male) 4.7

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