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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:110.4 nTPM
HPA Brain:112.8 nTPM
GTEx:110.4 nTPM
FANTOM5:265.3 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:96.8 nTPM
Allen mouse:4.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA026077
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 98.9
2481 Female, age 94, left hemisphere 172.4
2288 Male, age 75, left hemisphere 116.9
2289 Male, age 61, right hemisphere 101.8
2290 Female, age 72, unknown 86.9
1854 Male, age 80, left hemisphere 85.9
1857 Female, age 85, left hemisphere 82.9
2846 Female, age 79, unknown 74.1
1781 Male, age 74, unknown 70.1
Globus pallidus, externus
nTPM: 108.7
1996 Male, age 80, right hemisphere 165.8
2772 Female, age 79, unknown 137.8
2646 Male, age 61, right hemisphere 96.8
2395 Male, age 75, both hemispheres 75.1
2567 Female, age 72, unknown 68.3
Globus pallidus, internus
nTPM: 112.8
2037 Male, age 80, right hemisphere 131.3
2111 Female, age 85, right hemisphere 126.2
2778 Female, age 91, both hemispheres 118.9
1818 Male, age 74, unknown 117.8
2287 Male, age 75, right hemisphere 116.5
2483 Female, age 94, right hemisphere 98.9
2566 Female, age 72, unknown 79.7
Nucleus accumbens
nTPM: 87.2
2286 Male, age 75, left hemisphere 120.7
2391 Female, age 94, left hemisphere 114.0
1806 Female, age 85, left hemisphere 89.2
2698 Female, age 72, unknown 88.9
2732 Male, age 80, right hemisphere 85.2
2824 Male, age 61, right hemisphere 70.5
1856 Female, age 91, right hemisphere 67.1
1783 Male, age 74, unknown 62.0
Nucleus basalis of Meynert
nTPM: 75.8
2569 Male, age 61, both hemispheres 103.6
2393 Male, age 80, right hemisphere 74.8
2484 Female, age 94, left hemisphere 64.8
2821 Male, age 75, both hemispheres 59.9
Nucleus of the diagonal band
nTPM: 75.7
1812 Female, age 91, both hemispheres 88.3
2029 Male, age 61, right hemisphere 85.6
2775 Male, age 80, right hemisphere 72.7
1979 Male, age 74, unknown 72.3
2195 Female, age 85, both hemispheres 59.5
Putamen
nTPM: 81.7
2482 Female, age 94, left hemisphere 133.2
1829 Male, age 74, unknown 83.4
2489 Female, age 72, unknown 80.6
2647 Male, age 75, left hemisphere 71.1
1937 Female, age 91, right hemisphere 69.2
1838 Male, age 80, right hemisphere 68.9
2466 Female, age 79, unknown 65.3
Septal nuclei
nTPM: 88.4
2629 Female, age 94, right hemisphere 133.6
2199 Male, age 80, right hemisphere 101.7
2059 Female, age 85, both hemispheres 89.5
2394 Male, age 61, left hemisphere 82.5
2009 Female, age 91, both hemispheres 78.5
2031 Female, age 72, unknown 72.9
1960 Male, age 74, unknown 60.5
Stria terminalis, bed nucleus
nTPM: 65.3
2486 Female, age 94, both hemispheres 73.5
1974 Female, age 91, both hemispheres 63.4
2201 Male, age 74, unknown 59.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 110.4
Samples: 246

Max nTPM: 273.8
Min nTPM: 52.6
Std nTPM: 34.4
Median nTPM: 107.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 273.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 267.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 224.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 222.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 210.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 201.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 192.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 188.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 184.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 180.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 171.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 171.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 166.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 166.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 165.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 165.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 163.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 163.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 159.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 156.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 154.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 153.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 150.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 150.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 150.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 147.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 145.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 145.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 144.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 144.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 144.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 144.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 143.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 143.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 142.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 142.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 142.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 141.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 141.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 136.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 136.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 136.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 135.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 134.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 134.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 134.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 134.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 134.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 133.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 132.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 132.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 131.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 131.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 130.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 130.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 130.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 129.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 129.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 129.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 128.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 128.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 128.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 128.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 128.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 127.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 126.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 126.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 126.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 126.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 125.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 123.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 123.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 123.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 123.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 122.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 122.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 121.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 121.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 121.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 120.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 120.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 119.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 118.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 118.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 118.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 118.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 117.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 117.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 117.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 116.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 116.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 116.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 114.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 114.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 114.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 113.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 112.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 112.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 112.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 112.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 112.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 111.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 111.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 111.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 110.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 110.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 110.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 110.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 110.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 109.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 109.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 109.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 109.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 109.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 109.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 108.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 108.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 108.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 108.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 108.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 107.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 106.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 106.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 106.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 106.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 106.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 104.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 104.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 104.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 103.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 103.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 103.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 102.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 102.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 102.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 102.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 101.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 101.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 101.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 101.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 101.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 101.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 100.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 99.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 97.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 96.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 96.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 95.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 95.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 95.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 95.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 95.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 95.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 94.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 94.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 94.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 94.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 93.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 93.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 93.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 93.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 92.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 91.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 91.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 91.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 91.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 91.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 91.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 90.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 89.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 89.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 88.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 88.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 87.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 87.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 87.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 85.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 85.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 85.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 85.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 85.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 85.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 84.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 84.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 84.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 84.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 83.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 83.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 83.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 83.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 83.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 82.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 82.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 82.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 81.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 81.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 81.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 80.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 80.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 80.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 78.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 78.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 78.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 77.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 77.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 77.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 77.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 77.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 75.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 75.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 75.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 74.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 74.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 74.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 73.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 73.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 73.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 73.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 68.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 67.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 66.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 66.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 65.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 64.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 63.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 62.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 62.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 61.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 61.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 60.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 57.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 57.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 54.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 53.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 52.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 84.3
Samples: 246

Max nTPM: 222.6
Min nTPM: 39.3
Std nTPM: 28.0
Median nTPM: 79.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 222.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 217.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 162.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 159.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 153.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 149.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 148.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 146.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 145.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 144.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 140.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 139.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 138.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 136.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 133.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 133.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 132.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 130.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 128.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 126.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 125.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 123.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 123.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 122.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 119.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 118.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 117.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 116.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 114.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 113.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 111.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 110.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 110.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 109.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 109.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 109.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 108.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 108.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 107.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 107.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 107.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 106.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 106.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 105.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 105.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 105.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 105.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 104.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 104.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 104.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 104.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 104.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 103.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 103.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 102.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 100.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 99.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 99.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 98.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 98.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 98.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 98.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 98.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 97.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 97.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 96.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 95.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 95.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 95.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 94.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 94.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 94.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 94.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 94.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 94.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 93.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 93.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 92.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 92.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 92.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 92.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 92.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 91.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 91.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 91.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 91.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 91.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 90.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 90.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 90.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 90.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 89.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 89.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 89.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 88.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 88.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 87.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 87.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 87.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 87.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 86.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 86.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 85.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 85.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 84.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 84.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 84.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 84.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 83.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 83.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 82.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 82.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 82.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 82.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 82.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 81.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 80.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 80.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 80.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 80.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 80.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 79.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 79.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 79.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 79.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 79.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 78.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 78.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 77.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 77.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 77.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 76.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 76.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 76.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 75.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 75.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 74.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 74.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 74.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 74.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 74.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 73.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 73.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 72.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 71.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 71.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 71.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 71.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 70.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 70.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 70.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 70.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 70.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 69.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 69.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 69.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 69.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 69.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 69.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 69.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 69.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 69.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 69.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 69.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 69.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 69.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 68.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 68.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 68.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 68.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 68.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 68.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 67.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 67.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 67.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 66.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 66.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 66.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 66.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 66.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 65.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 65.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 64.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 64.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 64.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 64.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 64.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 63.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 63.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 63.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 63.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 62.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 62.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 62.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 62.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 62.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 61.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 60.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 60.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 60.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 60.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 60.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 60.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 59.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 59.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 59.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 59.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 59.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 58.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 58.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 58.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 58.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 58.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 58.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 57.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 57.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 57.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 57.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 56.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 55.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 53.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 53.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 53.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 52.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 52.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 52.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 52.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 52.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 51.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 51.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 51.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 51.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 51.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 50.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 49.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 47.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 45.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 45.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 44.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 42.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 42.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 42.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 41.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 40.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 39.3
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Brain - Putamen (basal ganglia)
Average nTPM: 100.4
Samples: 205

Max nTPM: 235.0
Min nTPM: 40.9
Std nTPM: 30.2
Median nTPM: 94.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 235.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 217.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 199.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 180.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 179.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 173.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 172.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 164.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 153.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 151.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 151.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 148.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 146.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 144.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 144.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 143.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 141.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 140.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 140.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 139.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 139.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 138.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 137.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 134.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 131.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 131.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 128.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 127.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 127.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 126.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 126.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 126.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 126.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 126.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 125.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 124.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 123.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 123.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 123.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 121.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 120.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 120.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 120.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 119.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 119.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 118.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 118.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 118.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 118.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 118.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 118.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 117.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 117.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 117.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 117.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 117.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 116.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 115.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 115.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 115.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 115.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 114.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 113.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 113.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 111.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 111.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 111.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 110.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 109.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 109.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 108.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 107.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 107.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 107.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 106.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 106.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 106.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 106.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 105.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 104.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 104.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 103.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 103.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 103.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 102.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 102.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 100.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 100.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 100.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 100.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 99.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 99.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 99.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 99.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 97.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 97.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 96.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 96.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 96.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 95.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 95.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 94.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 94.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 94.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 94.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 94.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 94.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 93.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 93.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 93.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 93.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 92.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 92.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 92.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 91.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 91.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 91.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 91.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 91.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 91.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 91.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 91.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 90.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 90.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 90.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 90.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 90.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 90.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 90.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 89.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 89.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 88.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 87.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 86.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 85.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 85.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 84.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 84.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 84.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 83.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 83.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 83.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 83.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 82.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 82.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 82.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 81.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 81.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 80.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 80.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 80.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 79.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 78.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 78.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 77.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 77.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 77.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 76.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 76.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 76.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 75.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 75.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 75.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 75.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 74.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 74.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 74.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 74.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 74.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 74.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 74.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 73.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 73.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 73.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 72.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 72.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 72.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 72.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 71.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 71.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 69.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 67.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 67.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 67.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 67.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 66.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 65.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 65.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 64.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 62.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 62.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 61.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 60.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 58.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 57.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 55.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 54.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 54.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 45.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 40.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

265.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 133.5
FF:10164-103B2 76 years, female 133.5
Nucleus accumbens
Scaled Tags Per Million: 158.2
FF:10037-101F1 23-56 years, mixed 158.2
Putamen
Scaled Tags Per Million: 114.0
FF:10176-103C5 60 years, female 114.0
Globus pallidus
Scaled Tags Per Million: 265.3
FF:10175-103C4 60 years, female 319.4
FF:10161-103A8 76 years, female 211.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.1
Pig sample Sample description nTPM
Caudate
nTPM: 22.5
Samples: 4

Max nTPM: 23.5
Min nTPM: 20.6
Sample A Female 23.1
Sample B Female 22.8
Sample C Male 23.5
Sample D Male 20.6
Putamen
nTPM: 30.1
Samples: 4

Max nTPM: 43.0
Min nTPM: 21.6
Sample A Female 43.0
Sample B Female 21.6
Sample C Male 28.7
Sample D Male 26.9
Septum
nTPM: 29.5
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.0
Sample A Female 32.3
Sample B Female 27.2
Sample C Male 26.0
Sample D Male 32.6
Ventral pallidum
nTPM: 28.4
Samples: 4

Max nTPM: 31.2
Min nTPM: 24.1
Sample A Female 24.1
Sample B Female 28.7
Sample C Male 31.2
Sample D Male 29.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 96.8
Samples: 4

Max nTPM: 104.6
Min nTPM: 89.5
Sample A Male 97.3
Sample B Male 95.7
Sample C Female 104.6
Sample D Female 89.5
Septum
nTPM: 90.0
Samples: 4

Max nTPM: 108.7
Min nTPM: 64.9
Sample A Male 64.9
Sample B Male 89.0
Sample C Female 97.2
Sample D Female 108.7
Ventral forebrain
nTPM: 65.1
Samples: 4

Max nTPM: 71.3
Min nTPM: 58.3
Sample A Male 71.3
Sample B Male 58.3
Sample C Female 65.8
Sample D Female 64.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.7
1205 Antisense, RP_040324_01_D01, Mouse strain C57BL/6J (56 days, male) 3.7
1206 Antisense, RP_040324_01_D01, Mouse strain C57BL/6J (56 days, male) 2.2
Pallidum
Expression energy: 4.1
1205 Antisense, RP_040324_01_D01, Mouse strain C57BL/6J (56 days, male) 4.1
1206 Antisense, RP_040324_01_D01, Mouse strain C57BL/6J (56 days, male) 2.8

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