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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:224.9 nTPM
HPA Brain:367.0 nTPM
GTEx:224.9 nTPM
FANTOM5:1016.1 Scaled Tags Per Million
Pig:285.6 nTPM
Mouse:927.5 nTPM
Allen mouse:15.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042754Antibody HPA043398
Glial cells LowNot detected
Neuronal cells HighMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

367.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 263.9
2481 Female, age 94, left hemisphere 295.7
2288 Male, age 75, left hemisphere 295.4
1781 Male, age 74, unknown 289.3
2290 Female, age 72, unknown 270.7
2846 Female, age 79, unknown 265.2
1857 Female, age 85, left hemisphere 265.1
1854 Male, age 80, left hemisphere 229.6
2289 Male, age 61, right hemisphere 200.5
Globus pallidus, externus
nTPM: 184.0
2772 Female, age 79, unknown 258.7
2395 Male, age 75, both hemispheres 230.7
1996 Male, age 80, right hemisphere 203.8
2646 Male, age 61, right hemisphere 115.4
2567 Female, age 72, unknown 111.3
Globus pallidus, internus
nTPM: 208.6
2287 Male, age 75, right hemisphere 284.9
2778 Female, age 91, both hemispheres 252.1
2483 Female, age 94, right hemisphere 214.9
1818 Male, age 74, unknown 202.7
2111 Female, age 85, right hemisphere 201.2
2037 Male, age 80, right hemisphere 166.8
2566 Female, age 72, unknown 137.8
Nucleus accumbens
nTPM: 275.7
1856 Female, age 91, right hemisphere 353.7
2286 Male, age 75, left hemisphere 320.6
1783 Male, age 74, unknown 280.1
2824 Male, age 61, right hemisphere 269.7
2698 Female, age 72, unknown 266.8
2391 Female, age 94, left hemisphere 263.6
1806 Female, age 85, left hemisphere 261.9
2732 Male, age 80, right hemisphere 188.9
Nucleus basalis of Meynert
nTPM: 187.7
2484 Female, age 94, left hemisphere 237.1
2393 Male, age 80, right hemisphere 207.3
2821 Male, age 75, both hemispheres 199.8
2569 Male, age 61, both hemispheres 106.5
Nucleus of the diagonal band
nTPM: 367.0
2775 Male, age 80, right hemisphere 421.4
1812 Female, age 91, both hemispheres 414.6
2029 Male, age 61, right hemisphere 391.3
2195 Female, age 85, both hemispheres 363.2
1979 Male, age 74, unknown 244.6
Putamen
nTPM: 237.0
1937 Female, age 91, right hemisphere 276.3
2466 Female, age 79, unknown 269.6
2482 Female, age 94, left hemisphere 265.1
1829 Male, age 74, unknown 247.2
1838 Male, age 80, right hemisphere 241.3
2489 Female, age 72, unknown 185.0
2647 Male, age 75, left hemisphere 174.4
Septal nuclei
nTPM: 307.2
1960 Male, age 74, unknown 401.1
2031 Female, age 72, unknown 398.3
2629 Female, age 94, right hemisphere 371.1
2009 Female, age 91, both hemispheres 331.7
2059 Female, age 85, both hemispheres 266.9
2394 Male, age 61, left hemisphere 197.6
2199 Male, age 80, right hemisphere 183.8
Stria terminalis, bed nucleus
nTPM: 318.0
2486 Female, age 94, both hemispheres 381.1
1974 Female, age 91, both hemispheres 375.8
2201 Male, age 74, unknown 197.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

224.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 220.6
Samples: 246

Max nTPM: 486.0
Min nTPM: 93.6
Std nTPM: 54.8
Median nTPM: 211.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 486.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 419.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 392.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 380.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 369.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 365.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 361.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 344.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 335.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 332.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 331.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 325.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 321.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 321.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 310.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 306.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 304.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 303.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 303.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 300.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 300.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 299.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 298.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 296.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 294.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 289.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 289.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 288.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 287.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 283.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 281.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 278.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 278.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 277.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 276.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 275.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 274.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 270.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 269.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 267.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 265.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 264.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 262.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 259.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 259.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 258.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 258.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 257.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 257.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 255.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 254.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 253.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 253.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 252.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 251.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 251.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 249.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 249.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 248.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 247.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 247.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 247.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 246.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 246.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 245.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 245.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 245.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 243.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 242.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 242.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 241.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 241.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 240.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 240.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 239.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 239.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 238.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 238.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 237.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 237.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 236.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 236.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 235.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 235.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 234.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 232.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 232.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 231.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 231.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 231.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 230.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 228.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 228.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 227.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 227.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 225.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 225.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 225.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 223.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 223.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 223.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 222.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 221.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 221.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 220.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 219.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 218.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 217.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 217.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 217.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 217.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 217.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 215.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 215.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 215.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 215.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 213.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 213.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 213.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 212.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 212.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 212.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 212.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 211.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 211.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 210.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 209.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 209.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 208.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 208.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 207.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 207.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 206.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 206.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 205.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 205.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 205.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 204.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 204.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 204.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 203.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 203.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 203.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 203.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 202.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 202.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 201.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 201.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 200.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 199.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 199.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 198.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 198.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 198.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 198.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 197.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 197.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 195.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 195.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 194.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 193.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 192.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 191.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 190.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 190.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 190.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 189.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 188.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 188.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 186.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 186.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 186.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 186.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 186.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 185.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 185.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 185.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 185.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 185.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 183.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 183.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 183.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 182.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 182.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 182.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 182.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 182.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 181.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 181.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 181.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 180.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 180.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 179.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 179.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 178.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 178.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 177.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 176.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 175.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 174.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 174.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 174.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 174.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 173.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 173.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 173.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 172.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 171.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 170.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 170.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 170.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 170.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 170.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 169.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 168.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 167.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 167.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 167.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 166.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 165.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 164.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 163.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 163.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 159.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 159.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 156.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 156.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 152.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 151.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 151.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 151.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 151.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 150.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 146.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 145.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 145.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 142.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 138.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 136.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 135.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 134.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 131.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 128.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 124.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 93.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 224.9
Samples: 246

Max nTPM: 456.0
Min nTPM: 73.5
Std nTPM: 65.7
Median nTPM: 220.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 456.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 400.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 386.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 386.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 372.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 361.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 352.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 351.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 348.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 345.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 344.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 343.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 339.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 334.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 330.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 329.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 323.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 321.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 320.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 320.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 313.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 312.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 309.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 309.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 308.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 308.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 308.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 307.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 304.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 304.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 301.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 296.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 296.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 296.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 295.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 295.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 295.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 294.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 293.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 293.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 293.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 291.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 287.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 285.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 284.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 283.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 282.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 281.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 281.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 280.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 279.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 279.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 279.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 278.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 276.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 275.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 275.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 274.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 273.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 273.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 270.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 270.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 269.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 268.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 266.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 266.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 266.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 264.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 264.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 263.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 263.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 263.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 263.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 260.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 257.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 257.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 255.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 254.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 254.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 254.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 253.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 250.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 250.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 249.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 248.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 248.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 248.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 246.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 245.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 243.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 243.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 243.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 243.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 242.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 240.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 240.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 240.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 239.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 238.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 237.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 236.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 235.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 235.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 235.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 234.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 234.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 231.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 230.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 229.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 229.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 228.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 228.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 227.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 227.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 226.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 226.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 225.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 225.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 224.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 223.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 223.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 222.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 220.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 220.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 220.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 219.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 217.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 216.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 216.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 215.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 215.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 215.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 214.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 213.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 212.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 212.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 212.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 211.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 211.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 210.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 209.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 209.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 208.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 205.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 204.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 204.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 204.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 204.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 203.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 202.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 200.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 200.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 199.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 199.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 198.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 198.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 198.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 198.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 198.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 197.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 196.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 195.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 195.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 194.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 194.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 193.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 192.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 192.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 191.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 190.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 188.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 188.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 188.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 187.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 187.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 186.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 185.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 184.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 182.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 180.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 180.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 180.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 180.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 180.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 179.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 178.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 177.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 176.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 176.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 172.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 172.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 171.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 169.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 169.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 168.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 168.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 167.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 166.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 165.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 165.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 164.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 163.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 163.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 162.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 160.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 158.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 156.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 154.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 154.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 153.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 153.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 152.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 152.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 152.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 151.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 149.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 149.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 148.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 147.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 147.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 147.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 147.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 146.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 143.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 143.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 141.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 136.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 136.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 135.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 135.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 126.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 124.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 124.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 123.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 121.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 120.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 120.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 113.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 105.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 104.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 103.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 94.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 88.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 87.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 76.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 73.5
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Brain - Putamen (basal ganglia)
Average nTPM: 206.2
Samples: 205

Max nTPM: 368.8
Min nTPM: 92.8
Std nTPM: 48.7
Median nTPM: 206.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 368.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 358.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 315.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 315.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 308.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 294.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 289.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 289.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 287.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 284.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 283.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 281.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 281.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 281.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 275.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 275.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 272.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 271.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 270.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 269.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 267.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 266.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 265.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 264.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 264.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 264.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 263.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 262.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 261.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 259.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 259.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 257.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 255.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 255.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 254.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 252.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 251.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 251.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 250.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 250.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 250.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 248.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 248.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 247.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 247.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 247.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 245.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 243.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 242.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 241.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 240.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 240.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 238.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 237.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 237.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 236.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 233.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 233.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 232.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 231.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 231.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 229.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 229.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 228.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 226.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 226.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 224.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 224.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 224.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 222.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 221.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 221.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 220.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 219.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 218.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 217.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 217.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 216.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 216.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 216.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 216.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 215.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 215.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 215.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 215.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 215.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 215.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 213.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 212.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 211.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 211.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 210.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 210.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 209.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 209.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 207.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 207.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 207.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 207.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 207.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 206.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 206.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 206.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 206.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 206.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 205.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 205.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 204.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 204.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 204.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 203.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 203.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 202.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 201.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 200.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 199.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 199.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 198.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 197.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 197.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 196.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 196.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 196.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 195.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 195.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 193.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 192.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 191.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 190.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 190.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 190.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 188.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 188.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 187.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 185.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 184.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 183.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 182.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 181.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 180.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 179.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 179.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 178.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 177.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 176.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 176.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 175.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 174.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 172.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 172.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 172.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 171.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 171.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 170.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 169.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 169.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 168.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 167.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 167.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 166.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 165.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 165.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 165.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 165.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 165.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 164.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 163.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 163.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 160.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 160.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 160.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 159.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 159.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 158.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 158.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 155.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 155.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 155.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 152.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 152.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 147.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 146.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 145.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 145.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 144.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 143.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 143.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 140.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 140.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 137.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 135.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 134.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 132.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 132.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 131.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 129.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 125.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 121.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 115.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 114.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 108.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 106.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 97.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 93.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 92.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1016.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 611.4
FF:10164-103B2 76 years, female 611.4
Nucleus accumbens
Scaled Tags Per Million: 1016.1
FF:10037-101F1 23-56 years, mixed 1016.1
Putamen
Scaled Tags Per Million: 887.2
FF:10176-103C5 60 years, female 887.2
Globus pallidus
Scaled Tags Per Million: 520.9
FF:10175-103C4 60 years, female 568.9
FF:10161-103A8 76 years, female 473.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.6
Pig sample Sample description nTPM
Caudate
nTPM: 247.9
Samples: 4

Max nTPM: 294.6
Min nTPM: 215.3
Sample A Female 215.3
Sample B Female 233.3
Sample C Male 294.6
Sample D Male 248.4
Putamen
nTPM: 285.6
Samples: 4

Max nTPM: 390.1
Min nTPM: 207.4
Sample A Female 207.4
Sample B Female 230.9
Sample C Male 390.1
Sample D Male 314.0
Septum
nTPM: 229.3
Samples: 4

Max nTPM: 248.2
Min nTPM: 211.0
Sample A Female 248.2
Sample B Female 211.0
Sample C Male 218.0
Sample D Male 240.1
Ventral pallidum
nTPM: 232.0
Samples: 4

Max nTPM: 255.8
Min nTPM: 204.7
Sample A Female 235.4
Sample B Female 204.7
Sample C Male 232.0
Sample D Male 255.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

927.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 586.2
Samples: 4

Max nTPM: 598.3
Min nTPM: 571.4
Sample A Male 571.4
Sample B Male 591.8
Sample C Female 583.1
Sample D Female 598.3
Septum
nTPM: 927.5
Samples: 4

Max nTPM: 1021.7
Min nTPM: 845.1
Sample A Male 883.7
Sample B Male 1021.7
Sample C Female 959.6
Sample D Female 845.1
Ventral forebrain
nTPM: 672.8
Samples: 4

Max nTPM: 705.2
Min nTPM: 660.3
Sample A Male 660.3
Sample B Male 661.2
Sample C Female 705.2
Sample D Female 664.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.9
1405 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 13.9
1406 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 7.8
Pallidum
Expression energy: 15.7
1405 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 15.7
1406 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 7.7

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