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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:186.4 nTPM
HPA Brain:334.0 nTPM
GTEx:186.4 nTPM
FANTOM5:313.2 Scaled Tags Per Million
Pig:358.8 nTPM
Mouse:520.6 nTPM
Allen mouse:18.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013392Antibody HPA015600Antibody CAB004417
Glial cells HighHighMedium
Neuronal cells HighMediumMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

334.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 96.9
1781 Male, age 74, unknown 188.5
1857 Female, age 85, left hemisphere 116.2
2290 Female, age 72, unknown 108.6
2846 Female, age 79, unknown 103.4
1854 Male, age 80, left hemisphere 89.9
2288 Male, age 75, left hemisphere 63.5
2289 Male, age 61, right hemisphere 56.1
2481 Female, age 94, left hemisphere 49.3
Globus pallidus, externus
nTPM: 29.7
2395 Male, age 75, both hemispheres 58.6
2772 Female, age 79, unknown 26.1
2646 Male, age 61, right hemisphere 26.0
1996 Male, age 80, right hemisphere 19.3
2567 Female, age 72, unknown 18.4
Globus pallidus, internus
nTPM: 25.0
2483 Female, age 94, right hemisphere 42.9
2566 Female, age 72, unknown 41.7
2037 Male, age 80, right hemisphere 20.4
2287 Male, age 75, right hemisphere 19.5
1818 Male, age 74, unknown 18.8
2778 Female, age 91, both hemispheres 16.3
2111 Female, age 85, right hemisphere 15.3
Nucleus accumbens
nTPM: 137.6
1856 Female, age 91, right hemisphere 268.1
1783 Male, age 74, unknown 178.7
2698 Female, age 72, unknown 158.4
2824 Male, age 61, right hemisphere 132.6
1806 Female, age 85, left hemisphere 130.0
2732 Male, age 80, right hemisphere 95.2
2286 Male, age 75, left hemisphere 80.8
2391 Female, age 94, left hemisphere 57.1
Nucleus basalis of Meynert
nTPM: 69.9
2821 Male, age 75, both hemispheres 132.3
2393 Male, age 80, right hemisphere 67.2
2484 Female, age 94, left hemisphere 56.6
2569 Male, age 61, both hemispheres 23.3
Nucleus of the diagonal band
nTPM: 334.0
1812 Female, age 91, both hemispheres 418.7
2775 Male, age 80, right hemisphere 392.5
2195 Female, age 85, both hemispheres 385.1
2029 Male, age 61, right hemisphere 273.3
1979 Male, age 74, unknown 200.4
Putamen
nTPM: 74.7
1937 Female, age 91, right hemisphere 150.7
1838 Male, age 80, right hemisphere 116.2
1829 Male, age 74, unknown 68.6
2466 Female, age 79, unknown 68.2
2482 Female, age 94, left hemisphere 58.1
2647 Male, age 75, left hemisphere 31.1
2489 Female, age 72, unknown 29.7
Septal nuclei
nTPM: 268.0
1960 Male, age 74, unknown 380.4
2629 Female, age 94, right hemisphere 378.0
2009 Female, age 91, both hemispheres 315.1
2031 Female, age 72, unknown 294.7
2059 Female, age 85, both hemispheres 235.3
2199 Male, age 80, right hemisphere 140.2
2394 Male, age 61, left hemisphere 131.9
Stria terminalis, bed nucleus
nTPM: 325.0
1974 Female, age 91, both hemispheres 412.5
2486 Female, age 94, both hemispheres 316.3
2201 Male, age 74, unknown 246.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 94.8
Samples: 246

Max nTPM: 589.0
Min nTPM: 12.5
Std nTPM: 73.1
Median nTPM: 79.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 589.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 449.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 402.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 375.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 278.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 259.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 247.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 246.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 244.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 239.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 216.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 213.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 208.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 208.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 205.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 203.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 197.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 196.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 195.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 188.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 187.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 187.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 185.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 182.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 178.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 172.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 170.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 169.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 168.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 166.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 165.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 163.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 156.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 154.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 153.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 152.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 151.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 151.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 148.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 146.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 145.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 144.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 142.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 141.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 140.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 140.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 138.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 138.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 138.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 137.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 137.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 134.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 133.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 131.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 131.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 129.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 126.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 125.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 124.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 123.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 122.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 118.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 117.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 117.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 116.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 116.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 115.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 115.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 115.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 114.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 114.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 114.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 113.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 113.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 111.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 111.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 110.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 109.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 108.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 106.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 105.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 105.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 104.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 103.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 103.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 103.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 102.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 102.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 101.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 101.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 99.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 99.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 99.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 98.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 98.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 98.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 98.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 98.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 98.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 98.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 98.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 97.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 96.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 96.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 95.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 93.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 92.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 92.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 90.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 89.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 89.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 89.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 89.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 88.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 85.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 85.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 82.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 81.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 80.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 80.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 79.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 79.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 78.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 78.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 78.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 76.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 76.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 75.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 75.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 74.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 74.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 73.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 72.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 71.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 70.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 70.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 69.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 68.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 68.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 67.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 66.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 63.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 63.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 63.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 63.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 63.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 62.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 62.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 60.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 59.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 58.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 57.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 57.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 57.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 56.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 56.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 55.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 55.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 54.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 53.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 52.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 52.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 50.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 49.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 49.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 48.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 46.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 45.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 45.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 44.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 44.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 44.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 43.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 42.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 41.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 39.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 39.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 39.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 39.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 37.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 37.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 37.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 36.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 35.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 35.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 35.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 34.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 34.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 33.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 33.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 32.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 32.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 31.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 31.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 30.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 29.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 29.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 29.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 27.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 26.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 26.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 26.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 25.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 24.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 24.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 24.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 23.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 22.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 21.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 21.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 20.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 20.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 20.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 19.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 19.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 17.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 17.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 17.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 16.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 15.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 14.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 14.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 13.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 12.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 186.4
Samples: 246

Max nTPM: 444.1
Min nTPM: 10.2
Std nTPM: 94.0
Median nTPM: 189.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 444.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 392.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 373.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 370.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 360.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 360.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 346.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 341.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 340.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 337.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 337.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 333.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 329.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 329.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 327.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 325.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 324.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 322.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 321.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 318.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 317.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 316.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 310.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 309.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 308.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 306.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 304.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 304.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 302.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 301.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 299.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 298.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 298.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 294.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 292.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 291.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 290.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 290.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 288.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 287.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 285.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 285.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 285.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 282.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 280.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 280.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 278.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 276.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 273.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 272.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 272.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 271.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 271.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 271.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 268.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 267.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 267.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 265.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 265.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 264.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 262.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 262.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 262.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 258.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 257.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 256.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 255.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 254.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 254.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 253.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 245.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 245.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 245.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 244.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 244.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 244.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 244.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 241.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 240.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 237.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 236.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 230.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 230.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 229.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 228.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 226.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 223.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 223.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 222.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 222.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 219.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 219.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 218.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 215.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 215.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 214.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 213.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 211.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 210.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 209.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 207.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 207.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 204.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 203.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 202.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 201.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 200.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 200.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 199.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 199.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 198.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 197.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 196.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 196.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 195.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 195.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 194.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 194.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 194.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 194.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 193.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 192.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 190.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 188.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 188.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 188.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 186.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 186.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 186.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 186.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 185.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 184.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 183.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 182.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 181.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 178.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 178.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 177.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 177.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 177.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 175.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 175.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 174.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 173.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 173.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 170.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 168.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 168.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 168.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 167.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 166.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 166.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 166.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 165.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 162.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 160.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 159.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 157.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 157.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 156.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 155.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 154.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 151.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 149.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 147.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 146.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 144.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 142.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 142.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 140.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 139.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 137.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 137.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 136.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 133.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 132.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 130.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 124.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 123.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 123.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 122.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 117.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 116.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 115.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 115.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 115.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 115.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 112.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 109.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 109.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 106.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 101.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 96.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 94.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 89.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 89.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 88.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 86.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 85.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 84.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 83.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 80.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 72.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 71.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 69.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 63.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 63.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 62.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 60.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 60.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 57.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 54.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 53.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 53.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 53.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 52.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 52.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 51.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 49.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 48.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 47.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 46.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 45.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 44.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 43.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 43.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 41.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 41.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 41.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 41.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 40.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 35.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 34.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 33.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 31.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 26.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 25.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 25.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 24.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 22.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 21.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 19.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 18.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.2
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Brain - Putamen (basal ganglia)
Average nTPM: 73.5
Samples: 205

Max nTPM: 297.5
Min nTPM: 9.2
Std nTPM: 52.5
Median nTPM: 61.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 297.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 274.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 240.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 226.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 216.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 206.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 189.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 186.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 177.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 176.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 175.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 174.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 171.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 167.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 163.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 158.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 154.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 152.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 152.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 146.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 146.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 146.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 144.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 141.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 134.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 134.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 132.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 132.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 128.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 128.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 126.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 125.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 124.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 123.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 119.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 118.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 117.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 117.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 116.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 115.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 114.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 114.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 109.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 109.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 107.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 101.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 101.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 100.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 99.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 98.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 98.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 97.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 96.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 96.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 95.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 95.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 94.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 92.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 91.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 88.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 88.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 87.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 86.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 86.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 85.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 83.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 82.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 81.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 80.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 79.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 79.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 78.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 78.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 78.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 77.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 76.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 76.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 75.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 75.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 74.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 73.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 72.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 71.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 71.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 71.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 71.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 71.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 71.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 70.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 70.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 68.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 68.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 68.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 67.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 66.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 65.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 65.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 65.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 65.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 64.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 61.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 61.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 60.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 60.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 59.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 58.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 57.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 56.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 56.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 55.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 54.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 54.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 51.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 50.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 50.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 49.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 49.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 48.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 46.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 46.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 45.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 45.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 44.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 43.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 43.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 43.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 43.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 42.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 42.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 41.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 41.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 40.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 40.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 40.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 38.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 38.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 38.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 38.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 37.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 36.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 36.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 36.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 36.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 35.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 33.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 33.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 31.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 31.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 31.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 30.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 30.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 30.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 27.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 26.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 26.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 26.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 26.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 25.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 25.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 25.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 24.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 24.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 23.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 23.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 23.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 22.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 22.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 21.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 20.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 19.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 19.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 19.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 18.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 18.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 17.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 16.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 15.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 14.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 14.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 13.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 13.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 12.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 12.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 10.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

313.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 258.5
FF:10164-103B2 76 years, female 258.5
Nucleus accumbens
Scaled Tags Per Million: 290.3
FF:10037-101F1 23-56 years, mixed 290.3
Putamen
Scaled Tags Per Million: 313.2
FF:10176-103C5 60 years, female 313.2
Globus pallidus
Scaled Tags Per Million: 50.8
FF:10175-103C4 60 years, female 58.8
FF:10161-103A8 76 years, female 42.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

358.8
Pig sample Sample description nTPM
Caudate
nTPM: 358.8
Samples: 4

Max nTPM: 411.4
Min nTPM: 309.2
Sample A Female 319.9
Sample B Female 394.7
Sample C Male 411.4
Sample D Male 309.2
Putamen
nTPM: 353.6
Samples: 4

Max nTPM: 430.7
Min nTPM: 248.1
Sample A Female 248.1
Sample B Female 320.5
Sample C Male 430.7
Sample D Male 414.9
Septum
nTPM: 355.1
Samples: 4

Max nTPM: 444.6
Min nTPM: 279.8
Sample A Female 400.4
Sample B Female 295.5
Sample C Male 444.6
Sample D Male 279.8
Ventral pallidum
nTPM: 325.4
Samples: 4

Max nTPM: 416.9
Min nTPM: 201.4
Sample A Female 386.1
Sample B Female 201.4
Sample C Male 416.9
Sample D Male 297.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

520.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 344.4
Samples: 4

Max nTPM: 364.9
Min nTPM: 316.0
Sample A Male 316.0
Sample B Male 351.9
Sample C Female 344.7
Sample D Female 364.9
Septum
nTPM: 520.6
Samples: 4

Max nTPM: 575.8
Min nTPM: 492.6
Sample A Male 575.8
Sample B Male 506.9
Sample C Female 492.6
Sample D Female 507.1
Ventral forebrain
nTPM: 417.0
Samples: 4

Max nTPM: 432.7
Min nTPM: 394.1
Sample A Male 394.1
Sample B Male 432.7
Sample C Female 424.3
Sample D Female 416.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.3
79669511 Antisense, RP_071204_01_C11, Mouse strain C57BL/6J (56 days, male) 20.1
70928270 Antisense, RP_050725_02_C05, Mouse strain C57BL/6J (56 days, male) 14.5
Pallidum
Expression energy: 18.6
79669511 Antisense, RP_071204_01_C11, Mouse strain C57BL/6J (56 days, male) 20.7
70928270 Antisense, RP_050725_02_C05, Mouse strain C57BL/6J (56 days, male) 16.6

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