We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
GNB2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • GNB2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:196.7 nTPM
HPA Brain:167.5 nTPM
GTEx:196.7 nTPM
FANTOM5:104.4 Scaled Tags Per Million
Pig:114.9 nTPM
Mouse:563.7 nTPM
Allen mouse:13.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040736Antibody CAB010032
Glial cells Not detectedNot detected
Neuronal cells LowLow


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 167.5
1857 Female, age 85, left hemisphere 205.9
2290 Female, age 72, unknown 189.2
1854 Male, age 80, left hemisphere 176.6
2846 Female, age 79, unknown 171.3
2481 Female, age 94, left hemisphere 164.7
1781 Male, age 74, unknown 159.7
2289 Male, age 61, right hemisphere 155.5
2288 Male, age 75, left hemisphere 117.0
Globus pallidus, externus
nTPM: 130.4
1996 Male, age 80, right hemisphere 157.7
2646 Male, age 61, right hemisphere 149.0
2772 Female, age 79, unknown 127.1
2395 Male, age 75, both hemispheres 122.7
2567 Female, age 72, unknown 95.3
Globus pallidus, internus
nTPM: 122.8
2483 Female, age 94, right hemisphere 180.3
2037 Male, age 80, right hemisphere 136.9
2287 Male, age 75, right hemisphere 123.3
2778 Female, age 91, both hemispheres 118.5
1818 Male, age 74, unknown 106.6
2566 Female, age 72, unknown 105.8
2111 Female, age 85, right hemisphere 88.4
Nucleus accumbens
nTPM: 159.9
1806 Female, age 85, left hemisphere 216.2
1783 Male, age 74, unknown 189.6
1856 Female, age 91, right hemisphere 185.3
2824 Male, age 61, right hemisphere 159.7
2698 Female, age 72, unknown 144.0
2732 Male, age 80, right hemisphere 138.9
2286 Male, age 75, left hemisphere 135.2
2391 Female, age 94, left hemisphere 110.3
Nucleus basalis of Meynert
nTPM: 149.2
2569 Male, age 61, both hemispheres 170.4
2484 Female, age 94, left hemisphere 163.3
2393 Male, age 80, right hemisphere 153.1
2821 Male, age 75, both hemispheres 109.9
Nucleus of the diagonal band
nTPM: 142.6
1979 Male, age 74, unknown 154.8
1812 Female, age 91, both hemispheres 147.0
2775 Male, age 80, right hemisphere 142.4
2195 Female, age 85, both hemispheres 136.6
2029 Male, age 61, right hemisphere 132.5
Putamen
nTPM: 163.0
2466 Female, age 79, unknown 198.7
1838 Male, age 80, right hemisphere 180.1
1829 Male, age 74, unknown 173.0
1937 Female, age 91, right hemisphere 157.0
2489 Female, age 72, unknown 153.0
2482 Female, age 94, left hemisphere 143.5
2647 Male, age 75, left hemisphere 135.6
Septal nuclei
nTPM: 148.3
2031 Female, age 72, unknown 178.1
1960 Male, age 74, unknown 166.3
2059 Female, age 85, both hemispheres 153.7
2394 Male, age 61, left hemisphere 151.8
2199 Male, age 80, right hemisphere 145.9
2009 Female, age 91, both hemispheres 133.2
2629 Female, age 94, right hemisphere 108.9
Stria terminalis, bed nucleus
nTPM: 123.9
1974 Female, age 91, both hemispheres 130.9
2201 Male, age 74, unknown 122.0
2486 Female, age 94, both hemispheres 118.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

196.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 183.8
Samples: 246

Max nTPM: 298.1
Min nTPM: 81.3
Std nTPM: 36.2
Median nTPM: 181.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 298.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 289.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 274.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 262.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 258.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 257.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 254.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 251.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 250.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 250.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 249.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 249.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 248.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 244.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 243.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 243.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 242.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 242.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 240.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 240.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 240.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 239.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 236.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 235.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 235.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 233.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 233.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 233.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 232.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 232.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 231.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 231.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 230.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 229.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 229.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 228.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 224.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 223.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 222.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 221.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 220.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 220.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 218.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 217.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 216.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 216.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 216.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 215.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 215.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 212.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 212.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 210.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 210.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 209.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 208.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 208.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 208.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 207.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 205.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 205.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 205.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 204.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 204.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 203.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 203.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 202.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 202.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 202.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 201.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 201.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 201.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 200.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 200.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 200.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 199.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 199.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 198.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 198.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 197.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 197.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 197.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 197.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 195.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 194.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 194.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 194.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 194.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 193.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 193.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 193.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 192.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 191.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 191.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 191.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 191.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 190.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 190.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 190.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 189.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 189.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 188.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 188.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 188.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 188.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 188.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 187.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 187.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 186.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 185.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 184.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 184.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 184.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 184.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 184.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 183.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 183.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 182.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 182.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 182.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 182.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 182.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 182.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 181.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 181.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 181.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 181.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 180.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 180.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 179.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 179.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 178.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 178.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 177.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 177.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 176.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 176.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 176.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 176.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 175.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 175.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 175.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 174.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 174.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 174.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 174.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 174.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 173.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 173.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 173.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 173.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 172.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 172.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 172.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 171.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 170.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 170.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 169.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 169.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 168.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 167.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 167.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 167.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 166.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 165.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 165.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 164.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 164.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 164.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 163.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 163.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 163.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 163.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 163.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 162.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 162.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 162.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 161.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 161.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 161.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 161.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 161.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 160.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 160.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 160.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 158.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 158.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 158.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 158.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 157.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 157.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 157.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 156.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 156.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 156.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 155.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 155.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 154.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 153.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 153.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 153.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 152.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 152.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 151.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 151.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 151.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 150.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 150.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 149.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 149.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 148.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 148.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 148.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 147.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 147.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 147.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 146.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 145.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 145.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 144.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 141.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 139.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 138.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 137.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 135.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 135.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 134.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 133.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 133.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 132.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 131.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 131.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 130.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 129.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 129.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 128.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 127.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 126.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 120.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 119.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 116.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 111.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 97.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 95.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 81.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 196.7
Samples: 246

Max nTPM: 369.5
Min nTPM: 82.1
Std nTPM: 44.7
Median nTPM: 188.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 369.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 361.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 348.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 329.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 311.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 308.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 302.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 299.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 298.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 285.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 285.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 282.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 279.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 269.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 267.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 266.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 259.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 257.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 257.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 256.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 255.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 251.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 250.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 248.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 248.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 248.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 247.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 246.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 245.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 245.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 245.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 245.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 244.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 241.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 240.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 239.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 239.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 239.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 237.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 236.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 236.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 236.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 236.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 235.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 234.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 233.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 232.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 232.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 231.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 230.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 229.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 227.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 227.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 226.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 226.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 226.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 225.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 225.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 223.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 223.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 222.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 222.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 221.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 221.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 221.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 218.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 217.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 217.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 216.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 216.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 216.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 215.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 215.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 214.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 214.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 213.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 213.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 213.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 213.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 212.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 212.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 210.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 209.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 208.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 208.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 207.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 207.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 206.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 206.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 206.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 206.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 205.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 204.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 203.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 203.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 202.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 202.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 202.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 202.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 201.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 200.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 200.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 199.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 198.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 198.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 198.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 197.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 196.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 196.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 195.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 195.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 195.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 195.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 195.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 194.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 193.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 192.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 191.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 190.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 190.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 190.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 189.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 189.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 188.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 188.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 188.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 187.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 187.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 186.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 186.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 185.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 185.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 185.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 184.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 184.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 184.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 184.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 184.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 183.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 183.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 183.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 183.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 183.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 183.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 182.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 182.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 182.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 182.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 181.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 181.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 181.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 181.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 180.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 180.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 180.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 179.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 179.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 179.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 179.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 178.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 178.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 178.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 177.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 177.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 176.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 175.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 175.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 175.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 174.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 174.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 174.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 173.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 172.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 172.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 170.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 170.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 170.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 170.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 169.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 169.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 169.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 169.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 168.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 168.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 166.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 166.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 166.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 166.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 165.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 164.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 164.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 164.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 164.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 163.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 162.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 162.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 162.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 162.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 162.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 161.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 160.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 160.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 159.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 159.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 159.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 158.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 157.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 157.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 157.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 157.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 156.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 156.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 155.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 154.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 153.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 152.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 152.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 152.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 151.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 151.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 150.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 150.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 147.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 145.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 145.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 145.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 144.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 144.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 142.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 142.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 141.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 140.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 140.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 136.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 132.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 130.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 129.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 121.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 121.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 117.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 111.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 109.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 106.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 102.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 84.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 82.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 194.1
Samples: 205

Max nTPM: 359.9
Min nTPM: 112.3
Std nTPM: 41.9
Median nTPM: 188.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 359.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 350.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 310.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 298.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 286.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 282.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 282.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 278.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 273.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 264.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 262.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 258.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 257.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 255.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 254.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 253.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 252.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 252.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 252.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 251.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 251.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 249.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 249.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 244.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 242.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 242.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 241.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 241.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 240.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 240.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 238.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 238.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 238.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 238.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 235.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 235.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 234.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 233.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 232.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 232.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 231.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 230.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 227.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 226.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 226.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 223.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 222.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 217.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 217.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 216.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 215.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 214.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 214.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 214.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 213.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 213.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 212.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 212.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 212.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 211.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 210.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 209.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 209.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 208.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 207.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 207.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 206.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 206.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 206.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 206.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 206.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 205.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 205.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 204.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 203.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 203.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 202.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 202.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 202.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 201.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 201.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 201.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 200.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 200.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 200.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 199.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 199.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 199.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 198.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 198.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 198.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 197.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 196.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 195.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 195.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 195.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 193.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 191.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 191.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 190.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 190.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 190.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 188.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 187.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 187.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 187.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 187.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 187.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 186.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 186.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 186.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 186.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 185.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 185.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 184.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 182.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 181.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 181.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 180.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 180.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 180.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 178.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 178.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 178.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 177.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 177.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 177.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 176.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 176.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 176.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 176.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 175.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 175.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 174.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 174.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 173.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 173.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 172.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 172.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 172.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 172.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 171.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 170.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 169.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 169.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 166.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 166.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 166.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 166.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 166.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 166.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 164.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 164.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 164.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 164.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 163.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 161.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 159.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 159.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 158.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 158.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 158.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 158.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 157.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 157.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 157.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 156.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 156.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 156.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 156.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 156.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 155.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 155.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 154.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 154.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 153.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 153.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 152.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 151.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 151.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 150.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 149.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 147.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 146.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 145.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 144.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 144.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 144.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 143.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 139.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 139.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 137.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 136.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 135.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 134.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 133.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 131.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 131.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 127.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 122.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 121.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 121.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 117.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 114.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 112.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

104.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 99.5
FF:10164-103B2 76 years, female 99.5
Nucleus accumbens
Scaled Tags Per Million: 44.1
FF:10037-101F1 23-56 years, mixed 44.1
Putamen
Scaled Tags Per Million: 104.4
FF:10176-103C5 60 years, female 104.4
Globus pallidus
Scaled Tags Per Million: 56.2
FF:10161-103A8 76 years, female 63.8
FF:10175-103C4 60 years, female 48.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.9
Pig sample Sample description nTPM
Caudate
nTPM: 113.4
Samples: 4

Max nTPM: 131.6
Min nTPM: 90.1
Sample A Female 90.1
Sample B Female 125.6
Sample C Male 131.6
Sample D Male 106.2
Putamen
nTPM: 114.9
Samples: 4

Max nTPM: 153.8
Min nTPM: 94.3
Sample A Female 94.3
Sample B Female 99.1
Sample C Male 153.8
Sample D Male 112.5
Septum
nTPM: 104.3
Samples: 4

Max nTPM: 118.3
Min nTPM: 93.6
Sample A Female 108.5
Sample B Female 96.8
Sample C Male 118.3
Sample D Male 93.6
Ventral pallidum
nTPM: 96.1
Samples: 4

Max nTPM: 105.6
Min nTPM: 85.3
Sample A Female 88.0
Sample B Female 105.6
Sample C Male 105.3
Sample D Male 85.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

563.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 563.7
Samples: 4

Max nTPM: 631.2
Min nTPM: 469.1
Sample A Male 616.4
Sample B Male 631.2
Sample C Female 469.1
Sample D Female 538.0
Septum
nTPM: 403.2
Samples: 4

Max nTPM: 428.9
Min nTPM: 376.9
Sample A Male 401.6
Sample B Male 428.9
Sample C Female 405.2
Sample D Female 376.9
Ventral forebrain
nTPM: 474.4
Samples: 4

Max nTPM: 528.5
Min nTPM: 443.5
Sample A Male 443.5
Sample B Male 468.5
Sample C Female 528.5
Sample D Female 457.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.6
513 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 13.6
512 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 12.9
Pallidum
Expression energy: 11.2
513 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 11.2
512 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 9.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org