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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:469.7 nTPM
HPA Brain:108.0 nTPM
GTEx:469.7 nTPM
FANTOM5:101.7 Scaled Tags Per Million
Pig:187.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044845
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 108.0
2481 Female, age 94, left hemisphere 166.1
2290 Female, age 72, unknown 120.2
2288 Male, age 75, left hemisphere 114.8
1857 Female, age 85, left hemisphere 107.1
2846 Female, age 79, unknown 101.2
1854 Male, age 80, left hemisphere 100.4
1781 Male, age 74, unknown 89.9
2289 Male, age 61, right hemisphere 64.7
Globus pallidus, externus
nTPM: 107.6
2772 Female, age 79, unknown 152.1
1996 Male, age 80, right hemisphere 131.1
2395 Male, age 75, both hemispheres 102.1
2646 Male, age 61, right hemisphere 83.3
2567 Female, age 72, unknown 69.2
Globus pallidus, internus
nTPM: 99.3
2483 Female, age 94, right hemisphere 137.2
2287 Male, age 75, right hemisphere 121.3
2778 Female, age 91, both hemispheres 103.2
1818 Male, age 74, unknown 97.7
2037 Male, age 80, right hemisphere 95.4
2111 Female, age 85, right hemisphere 77.5
2566 Female, age 72, unknown 62.9
Nucleus accumbens
nTPM: 95.9
2286 Male, age 75, left hemisphere 132.3
2391 Female, age 94, left hemisphere 125.4
2824 Male, age 61, right hemisphere 99.5
1806 Female, age 85, left hemisphere 95.6
1856 Female, age 91, right hemisphere 93.8
1783 Male, age 74, unknown 91.0
2698 Female, age 72, unknown 74.4
2732 Male, age 80, right hemisphere 55.5
Nucleus basalis of Meynert
nTPM: 90.6
2484 Female, age 94, left hemisphere 95.0
2393 Male, age 80, right hemisphere 93.0
2821 Male, age 75, both hemispheres 89.3
2569 Male, age 61, both hemispheres 85.1
Nucleus of the diagonal band
nTPM: 78.4
1812 Female, age 91, both hemispheres 94.5
2775 Male, age 80, right hemisphere 85.4
2029 Male, age 61, right hemisphere 76.3
2195 Female, age 85, both hemispheres 68.5
1979 Male, age 74, unknown 67.1
Putamen
nTPM: 96.5
2482 Female, age 94, left hemisphere 135.0
2466 Female, age 79, unknown 114.9
1937 Female, age 91, right hemisphere 106.6
2647 Male, age 75, left hemisphere 96.5
2489 Female, age 72, unknown 89.0
1838 Male, age 80, right hemisphere 68.1
1829 Male, age 74, unknown 65.8
Septal nuclei
nTPM: 71.0
2031 Female, age 72, unknown 95.3
1960 Male, age 74, unknown 76.3
2199 Male, age 80, right hemisphere 74.1
2009 Female, age 91, both hemispheres 70.2
2059 Female, age 85, both hemispheres 62.5
2394 Male, age 61, left hemisphere 61.6
2629 Female, age 94, right hemisphere 57.3
Stria terminalis, bed nucleus
nTPM: 60.2
1974 Female, age 91, both hemispheres 78.1
2486 Female, age 94, both hemispheres 55.1
2201 Male, age 74, unknown 47.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

469.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 386.0
Samples: 246

Max nTPM: 1500.1
Min nTPM: 170.3
Std nTPM: 167.9
Median nTPM: 356.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1500.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1307.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1157.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1028.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1002.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 884.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 825.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 797.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 725.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 631.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 624.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 612.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 610.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 605.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 603.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 593.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 592.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 589.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 584.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 565.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 563.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 559.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 555.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 555.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 543.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 525.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 523.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 521.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 518.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 517.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 516.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 509.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 502.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 497.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 495.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 495.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 495.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 494.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 490.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 488.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 482.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 479.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 479.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 477.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 471.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 469.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 469.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 468.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 467.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 465.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 464.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 463.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 463.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 460.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 458.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 457.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 455.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 451.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 450.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 448.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 447.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 443.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 443.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 442.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 442.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 442.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 440.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 435.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 435.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 434.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 433.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 429.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 429.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 423.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 423.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 422.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 420.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 420.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 418.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 416.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 415.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 412.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 411.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 409.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 407.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 404.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 400.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 399.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 399.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 398.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 396.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 395.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 395.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 393.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 393.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 393.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 393.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 391.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 390.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 390.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 388.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 388.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 388.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 385.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 383.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 380.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 379.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 376.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 373.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 371.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 371.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 370.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 369.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 368.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 367.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 366.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 366.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 365.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 364.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 362.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 361.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 360.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 357.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 355.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 355.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 354.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 354.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 354.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 352.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 351.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 346.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 345.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 343.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 343.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 340.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 338.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 338.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 337.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 336.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 334.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 332.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 326.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 325.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 324.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 323.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 323.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 322.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 321.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 320.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 317.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 314.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 314.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 310.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 310.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 306.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 305.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 305.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 303.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 302.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 302.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 301.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 301.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 301.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 300.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 299.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 296.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 292.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 292.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 292.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 291.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 291.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 291.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 289.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 289.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 287.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 286.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 284.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 283.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 282.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 282.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 281.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 281.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 281.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 280.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 280.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 280.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 280.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 279.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 278.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 278.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 277.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 277.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 277.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 276.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 276.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 274.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 273.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 270.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 269.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 268.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 268.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 267.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 265.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 263.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 261.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 260.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 259.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 259.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 259.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 255.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 255.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 254.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 254.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 251.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 251.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 250.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 250.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 249.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 248.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 245.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 243.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 242.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 241.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 235.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 231.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 230.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 228.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 228.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 227.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 223.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 222.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 220.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 216.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 210.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 204.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 202.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 200.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 199.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 199.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 199.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 196.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 192.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 191.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 186.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 184.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 170.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 339.4
Samples: 246

Max nTPM: 1190.4
Min nTPM: 140.1
Std nTPM: 142.7
Median nTPM: 310.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1190.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1091.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1008.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 909.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 776.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 717.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 713.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 695.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 643.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 631.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 612.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 600.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 570.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 565.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 564.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 548.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 537.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 529.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 517.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 515.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 512.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 506.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 492.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 487.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 486.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 486.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 482.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 480.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 477.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 471.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 467.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 457.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 451.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 450.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 445.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 443.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 442.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 429.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 427.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 424.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 422.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 420.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 420.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 419.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 417.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 415.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 414.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 413.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 412.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 408.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 408.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 403.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 400.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 399.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 397.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 396.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 394.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 392.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 391.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 385.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 378.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 378.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 377.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 374.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 373.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 372.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 371.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 371.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 369.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 368.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 367.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 366.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 365.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 365.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 365.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 363.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 362.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 361.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 361.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 354.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 352.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 352.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 351.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 351.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 351.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 350.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 346.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 346.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 346.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 346.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 345.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 345.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 344.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 343.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 340.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 340.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 334.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 334.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 334.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 333.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 332.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 332.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 332.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 331.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 330.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 330.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 328.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 327.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 326.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 323.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 322.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 322.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 322.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 321.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 320.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 318.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 316.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 315.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 311.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 311.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 311.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 310.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 310.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 310.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 308.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 308.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 307.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 304.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 304.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 304.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 300.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 298.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 298.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 297.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 297.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 297.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 296.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 296.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 296.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 295.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 293.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 292.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 291.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 290.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 287.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 286.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 286.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 286.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 282.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 281.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 281.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 280.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 280.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 278.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 277.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 276.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 276.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 276.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 275.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 274.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 273.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 273.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 271.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 271.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 269.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 269.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 263.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 263.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 262.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 262.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 261.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 261.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 260.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 260.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 259.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 259.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 255.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 255.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 254.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 253.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 253.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 252.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 249.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 248.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 248.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 247.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 247.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 247.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 247.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 247.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 246.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 246.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 245.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 245.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 245.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 244.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 244.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 243.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 240.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 240.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 239.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 239.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 238.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 237.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 236.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 234.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 233.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 233.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 230.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 230.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 229.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 225.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 225.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 223.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 222.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 220.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 219.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 218.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 217.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 217.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 216.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 213.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 212.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 211.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 209.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 206.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 203.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 203.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 202.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 201.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 196.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 194.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 185.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 185.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 184.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 181.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 180.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 179.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 177.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 174.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 174.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 171.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 164.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 160.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 148.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 140.1
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Brain - Putamen (basal ganglia)
Average nTPM: 469.7
Samples: 205

Max nTPM: 1814.6
Min nTPM: 181.4
Std nTPM: 208.7
Median nTPM: 428.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1814.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1350.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1265.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1236.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1060.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1019.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1010.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 975.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 948.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 925.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 897.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 832.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 822.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 800.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 752.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 741.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 726.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 714.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 696.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 683.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 680.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 672.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 666.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 666.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 648.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 644.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 640.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 632.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 629.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 623.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 615.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 614.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 590.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 569.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 566.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 561.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 558.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 555.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 555.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 554.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 552.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 547.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 546.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 538.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 535.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 535.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 534.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 528.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 525.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 524.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 522.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 521.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 517.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 510.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 510.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 507.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 506.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 502.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 500.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 497.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 496.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 490.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 488.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 488.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 488.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 480.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 480.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 479.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 478.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 476.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 475.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 473.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 472.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 470.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 468.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 464.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 464.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 462.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 460.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 458.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 452.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 450.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 450.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 450.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 448.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 447.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 447.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 443.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 441.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 440.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 440.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 439.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 439.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 438.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 437.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 436.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 435.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 435.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 434.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 431.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 431.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 431.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 428.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 427.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 426.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 424.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 423.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 422.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 421.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 419.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 418.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 417.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 414.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 410.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 410.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 406.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 404.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 400.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 400.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 397.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 395.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 393.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 391.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 388.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 387.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 387.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 386.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 383.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 383.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 383.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 379.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 379.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 378.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 376.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 375.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 372.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 371.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 370.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 369.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 369.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 366.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 366.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 364.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 363.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 363.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 362.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 359.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 357.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 356.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 354.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 353.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 352.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 351.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 344.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 344.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 344.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 341.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 339.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 338.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 337.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 336.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 334.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 332.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 328.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 328.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 325.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 323.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 321.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 319.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 318.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 316.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 312.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 309.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 309.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 307.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 306.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 305.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 304.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 304.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 304.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 303.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 298.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 294.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 291.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 287.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 285.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 281.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 277.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 277.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 274.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 271.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 268.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 267.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 266.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 265.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 264.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 253.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 248.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 244.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 242.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 237.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 234.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 228.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 223.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 181.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

101.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 70.5
FF:10164-103B2 76 years, female 70.5
Nucleus accumbens
Scaled Tags Per Million: 73.1
FF:10037-101F1 23-56 years, mixed 73.1
Putamen
Scaled Tags Per Million: 72.1
FF:10176-103C5 60 years, female 72.1
Globus pallidus
Scaled Tags Per Million: 101.7
FF:10175-103C4 60 years, female 146.7
FF:10161-103A8 76 years, female 56.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

187.1
Pig sample Sample description nTPM
Caudate
nTPM: 115.8
Samples: 4

Max nTPM: 130.3
Min nTPM: 99.9
Sample A Female 106.7
Sample B Female 130.3
Sample C Male 126.2
Sample D Male 99.9
Putamen
nTPM: 187.1
Samples: 4

Max nTPM: 230.8
Min nTPM: 139.5
Sample A Female 209.0
Sample B Female 139.5
Sample C Male 230.8
Sample D Male 168.9
Septum
nTPM: 131.5
Samples: 4

Max nTPM: 151.3
Min nTPM: 109.4
Sample A Female 151.3
Sample B Female 132.1
Sample C Male 133.0
Sample D Male 109.4
Ventral pallidum
nTPM: 132.6
Samples: 4

Max nTPM: 158.2
Min nTPM: 111.3
Sample A Female 111.3
Sample B Female 158.2
Sample C Male 136.7
Sample D Male 124.0

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