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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:419.5 nTPM
GTEx:419.5 nTPM
FANTOM5:95.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA032047Antibody CAB002139
Squamous epithelial cells HighHigh




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

419.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 419.5
Samples: 156

Max nTPM: 1793.6
Min nTPM: 16.8
Std nTPM: 359.7
Median nTPM: 369.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1793.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1210.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1186.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1130.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1113.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1066.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1056.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1036.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1026.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 1007.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1001.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 970.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 968.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 949.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 868.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 855.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 849.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 829.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 817.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 811.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 807.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 791.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 790.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 786.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 785.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 783.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 771.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 768.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 768.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 768.3
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 752.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 751.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 751.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 746.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 743.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 742.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 741.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 738.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 736.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 727.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 727.4
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 716.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 692.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 684.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 669.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 660.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 656.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 655.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 651.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 642.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 623.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 613.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 610.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 607.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 596.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 592.2
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 588.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 585.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 584.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 577.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 572.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 542.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 542.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 526.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 525.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 516.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 504.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 496.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 485.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 481.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 478.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 462.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 418.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 407.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 393.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 379.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 379.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 377.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 360.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 350.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 349.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 337.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 328.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 314.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 310.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 302.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 276.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 274.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 271.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 266.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 256.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 256.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 234.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 229.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 188.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 163.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 163.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 160.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 150.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 144.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 130.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 129.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 128.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 103.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 102.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 96.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 94.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 78.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 73.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 70.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 68.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 68.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 66.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 66.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 65.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 64.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 62.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 60.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 56.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 55.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 49.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 49.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 47.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 46.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 42.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 42.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 40.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 39.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 39.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 38.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 35.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 35.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 33.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 32.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 31.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 30.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 27.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 25.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 25.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 25.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 24.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 24.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 24.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 23.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 22.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 22.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 21.9
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 21.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 20.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 19.8
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 19.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 19.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 19.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 19.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 16.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 16.8
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

95.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 95.0
FF:10204-103F6 68 years, female 95.0

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