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RPL4
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:377.4 nTPM
FANTOM5:20.7 Scaled Tags Per Million
Pig:231.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA034600
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

377.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 377.4
Samples: 246

Max nTPM: 737.9
Min nTPM: 185.7
Std nTPM: 113.2
Median nTPM: 356.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 737.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 729.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 714.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 695.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 671.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 666.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 666.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 662.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 650.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 640.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 628.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 626.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 610.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 588.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 587.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 585.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 562.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 561.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 547.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 535.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 535.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 534.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 533.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 530.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 525.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 525.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 521.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 517.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 515.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 515.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 509.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 507.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 505.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 500.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 500.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 495.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 494.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 492.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 488.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 487.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 484.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 476.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 474.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 474.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 474.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 468.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 465.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 465.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 465.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 462.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 461.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 457.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 455.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 455.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 450.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 449.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 448.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 446.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 443.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 443.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 442.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 441.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 441.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 439.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 437.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 432.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 432.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 431.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 430.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 429.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 428.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 427.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 426.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 426.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 425.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 419.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 419.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 419.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 419.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 418.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 416.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 415.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 414.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 413.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 411.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 410.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 407.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 406.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 405.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 405.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 404.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 402.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 402.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 400.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 400.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 396.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 396.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 396.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 395.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 395.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 393.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 392.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 391.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 391.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 389.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 388.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 385.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 381.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 380.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 379.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 374.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 371.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 369.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 369.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 366.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 366.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 365.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 364.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 363.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 363.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 363.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 360.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 358.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 355.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 351.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 351.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 351.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 349.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 348.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 347.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 347.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 347.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 347.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 346.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 344.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 343.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 343.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 342.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 342.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 341.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 340.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 336.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 335.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 335.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 333.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 330.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 330.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 329.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 327.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 325.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 325.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 325.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 324.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 324.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 322.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 321.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 321.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 320.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 319.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 319.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 318.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 316.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 309.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 305.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 305.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 305.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 304.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 303.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 302.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 302.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 302.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 301.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 300.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 298.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 295.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 294.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 294.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 294.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 293.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 292.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 292.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 292.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 292.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 291.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 291.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 289.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 287.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 286.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 285.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 284.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 284.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 283.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 282.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 280.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 278.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 278.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 277.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 277.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 274.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 274.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 273.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 273.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 271.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 270.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 270.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 269.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 268.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 267.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 267.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 265.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 264.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 262.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 261.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 261.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 259.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 259.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 257.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 256.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 252.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 251.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 250.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 247.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 247.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 244.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 242.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 242.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 241.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 241.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 241.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 239.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 239.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 235.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 233.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 230.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 222.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 222.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 222.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 222.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 220.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 220.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 213.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 211.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 209.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 207.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 206.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 185.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

20.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 20.7
FF:10164-103B2 76 years, female 20.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.3
Pig sample Sample description nTPM
Caudate
nTPM: 231.3
Samples: 4

Max nTPM: 243.2
Min nTPM: 208.7
Sample A Female 243.2
Sample B Female 232.4
Sample C Male 240.8
Sample D Male 208.7

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