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MARCKSL1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:250.3 nTPM
HPA Brain:681.3 nTPM
GTEx:250.3 nTPM
FANTOM5:607.1 Scaled Tags Per Million
Pig:443.8 nTPM
Mouse:120.8 nTPM
Allen mouse:5.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030528Antibody CAB020787
Glial cells LowMedium
Neuronal cells Not detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

681.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 253.8
2288 Male, age 75, left hemisphere 347.5
2481 Female, age 94, left hemisphere 287.3
2289 Male, age 61, right hemisphere 278.3
2290 Female, age 72, unknown 255.8
1781 Male, age 74, unknown 241.8
2846 Female, age 79, unknown 213.9
1857 Female, age 85, left hemisphere 206.1
1854 Male, age 80, left hemisphere 199.4
Globus pallidus, externus
nTPM: 681.3
2646 Male, age 61, right hemisphere 857.0
1996 Male, age 80, right hemisphere 787.3
2772 Female, age 79, unknown 701.0
2567 Female, age 72, unknown 534.2
2395 Male, age 75, both hemispheres 527.3
Globus pallidus, internus
nTPM: 679.3
2111 Female, age 85, right hemisphere 873.4
2778 Female, age 91, both hemispheres 798.3
2287 Male, age 75, right hemisphere 783.2
2037 Male, age 80, right hemisphere 667.5
1818 Male, age 74, unknown 644.2
2566 Female, age 72, unknown 634.6
2483 Female, age 94, right hemisphere 353.8
Nucleus accumbens
nTPM: 304.3
2698 Female, age 72, unknown 427.8
2391 Female, age 94, left hemisphere 409.0
2732 Male, age 80, right hemisphere 350.0
2286 Male, age 75, left hemisphere 349.1
2824 Male, age 61, right hemisphere 279.2
1806 Female, age 85, left hemisphere 259.3
1783 Male, age 74, unknown 211.6
1856 Female, age 91, right hemisphere 148.2
Nucleus basalis of Meynert
nTPM: 414.2
2569 Male, age 61, both hemispheres 837.8
2821 Male, age 75, both hemispheres 378.9
2484 Female, age 94, left hemisphere 227.6
2393 Male, age 80, right hemisphere 212.4
Nucleus of the diagonal band
nTPM: 193.9
1812 Female, age 91, both hemispheres 256.3
2029 Male, age 61, right hemisphere 195.3
1979 Male, age 74, unknown 184.1
2195 Female, age 85, both hemispheres 174.9
2775 Male, age 80, right hemisphere 158.9
Putamen
nTPM: 219.3
1829 Male, age 74, unknown 287.7
2647 Male, age 75, left hemisphere 272.6
2482 Female, age 94, left hemisphere 239.4
1937 Female, age 91, right hemisphere 226.3
2489 Female, age 72, unknown 220.3
2466 Female, age 79, unknown 156.6
1838 Male, age 80, right hemisphere 131.8
Septal nuclei
nTPM: 234.7
2394 Male, age 61, left hemisphere 353.1
2629 Female, age 94, right hemisphere 269.3
2199 Male, age 80, right hemisphere 261.2
2059 Female, age 85, both hemispheres 252.3
2031 Female, age 72, unknown 179.2
2009 Female, age 91, both hemispheres 175.5
1960 Male, age 74, unknown 152.4
Stria terminalis, bed nucleus
nTPM: 216.3
2201 Male, age 74, unknown 259.4
1974 Female, age 91, both hemispheres 215.8
2486 Female, age 94, both hemispheres 173.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

250.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 203.1
Samples: 246

Max nTPM: 482.2
Min nTPM: 66.1
Std nTPM: 70.3
Median nTPM: 192.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 482.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 428.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 396.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 387.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 384.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 372.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 365.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 359.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 345.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 330.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 328.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 319.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 316.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 316.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 309.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 308.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 307.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 301.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 301.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 298.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 296.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 295.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 295.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 295.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 294.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 294.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 293.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 292.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 291.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 289.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 288.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 286.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 284.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 283.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 282.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 280.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 278.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 277.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 275.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 275.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 274.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 273.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 273.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 272.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 268.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 267.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 265.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 265.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 265.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 264.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 264.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 263.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 261.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 261.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 260.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 257.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 257.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 257.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 256.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 254.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 253.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 252.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 252.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 251.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 250.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 247.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 246.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 246.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 243.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 243.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 241.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 240.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 240.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 240.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 239.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 237.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 237.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 237.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 236.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 235.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 234.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 233.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 232.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 228.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 227.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 225.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 224.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 224.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 221.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 220.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 220.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 218.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 216.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 215.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 215.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 214.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 213.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 213.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 211.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 210.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 208.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 208.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 207.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 207.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 206.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 204.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 203.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 203.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 203.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 202.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 201.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 201.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 199.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 199.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 198.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 197.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 196.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 195.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 194.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 193.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 193.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 193.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 192.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 192.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 192.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 191.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 189.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 189.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 188.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 188.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 188.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 187.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 184.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 183.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 183.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 183.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 183.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 182.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 181.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 181.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 181.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 181.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 178.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 177.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 176.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 174.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 174.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 174.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 173.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 173.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 173.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 172.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 172.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 172.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 170.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 169.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 169.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 167.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 167.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 166.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 165.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 165.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 164.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 162.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 162.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 161.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 160.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 160.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 159.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 158.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 158.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 158.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 158.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 157.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 156.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 156.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 155.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 153.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 151.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 151.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 151.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 151.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 151.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 151.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 150.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 148.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 148.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 147.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 147.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 146.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 145.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 145.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 144.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 143.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 143.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 143.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 141.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 141.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 139.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 138.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 138.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 137.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 136.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 135.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 134.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 133.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 131.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 130.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 130.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 129.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 128.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 128.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 127.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 127.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 125.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 125.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 123.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 118.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 118.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 117.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 117.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 116.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 115.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 114.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 113.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 113.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 113.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 113.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 113.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 111.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 110.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 110.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 110.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 107.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 102.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 102.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 101.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 100.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 96.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 89.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 86.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 84.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 80.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 210.4
Samples: 246

Max nTPM: 803.2
Min nTPM: 64.8
Std nTPM: 97.2
Median nTPM: 184.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 803.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 560.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 537.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 527.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 457.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 453.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 452.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 442.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 439.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 418.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 405.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 398.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 389.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 385.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 378.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 376.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 374.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 373.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 368.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 361.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 359.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 351.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 330.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 326.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 324.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 323.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 317.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 315.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 314.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 312.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 308.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 306.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 302.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 301.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 293.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 292.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 291.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 290.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 290.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 288.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 286.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 286.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 285.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 285.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 284.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 282.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 280.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 275.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 275.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 273.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 271.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 269.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 269.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 268.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 267.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 267.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 266.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 266.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 262.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 261.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 260.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 258.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 253.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 251.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 250.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 247.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 247.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 245.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 244.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 244.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 243.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 242.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 241.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 241.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 240.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 240.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 239.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 235.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 235.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 232.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 232.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 230.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 229.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 228.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 228.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 227.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 227.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 226.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 226.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 224.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 224.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 223.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 218.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 217.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 217.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 213.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 213.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 212.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 209.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 209.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 206.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 206.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 202.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 200.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 200.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 200.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 199.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 199.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 199.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 199.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 199.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 198.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 195.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 193.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 191.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 190.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 189.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 189.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 188.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 188.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 187.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 186.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 185.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 184.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 184.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 184.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 182.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 181.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 181.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 181.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 181.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 179.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 179.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 178.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 178.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 176.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 176.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 173.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 173.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 172.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 171.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 171.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 170.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 168.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 168.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 167.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 166.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 165.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 165.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 165.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 163.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 162.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 162.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 162.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 162.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 162.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 161.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 159.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 157.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 157.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 156.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 156.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 155.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 155.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 155.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 154.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 154.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 153.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 152.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 152.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 152.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 151.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 151.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 149.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 149.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 148.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 147.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 146.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 146.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 146.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 145.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 145.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 144.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 144.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 142.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 142.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 142.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 142.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 141.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 141.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 141.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 138.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 138.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 138.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 138.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 137.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 136.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 135.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 134.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 133.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 132.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 129.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 129.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 128.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 127.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 125.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 125.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 124.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 124.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 124.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 123.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 123.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 122.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 121.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 121.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 120.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 120.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 119.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 118.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 116.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 115.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 114.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 113.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 113.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 113.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 111.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 111.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 110.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 109.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 108.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 107.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 107.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 107.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 107.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 107.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 106.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 104.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 104.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 102.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 89.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 88.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 82.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 77.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 75.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 67.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 64.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 250.3
Samples: 205

Max nTPM: 882.3
Min nTPM: 88.5
Std nTPM: 90.9
Median nTPM: 237.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 882.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 657.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 558.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 486.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 449.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 438.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 434.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 417.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 393.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 391.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 383.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 373.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 370.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 369.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 359.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 352.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 350.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 349.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 348.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 338.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 337.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 336.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 332.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 332.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 328.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 326.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 325.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 324.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 323.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 320.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 320.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 314.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 312.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 311.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 310.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 310.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 309.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 309.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 307.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 306.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 304.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 304.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 304.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 303.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 300.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 300.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 298.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 298.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 297.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 294.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 293.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 293.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 292.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 290.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 290.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 290.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 289.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 287.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 285.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 284.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 282.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 282.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 281.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 279.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 276.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 276.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 275.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 274.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 273.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 273.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 272.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 272.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 271.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 270.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 270.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 269.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 269.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 269.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 268.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 268.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 266.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 262.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 260.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 259.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 256.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 256.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 255.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 254.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 253.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 253.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 250.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 250.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 249.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 245.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 241.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 241.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 240.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 239.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 239.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 239.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 239.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 237.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 237.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 236.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 235.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 235.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 235.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 234.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 234.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 234.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 233.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 230.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 229.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 229.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 228.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 228.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 228.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 227.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 226.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 226.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 226.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 225.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 224.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 224.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 224.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 222.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 222.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 222.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 221.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 220.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 215.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 214.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 213.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 213.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 212.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 211.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 211.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 210.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 210.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 208.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 206.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 202.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 201.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 199.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 197.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 197.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 197.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 197.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 195.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 193.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 193.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 190.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 187.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 186.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 184.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 183.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 183.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 183.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 183.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 182.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 182.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 181.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 180.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 180.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 180.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 179.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 178.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 176.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 176.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 174.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 174.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 174.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 171.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 170.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 170.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 169.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 165.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 164.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 163.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 162.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 162.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 161.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 161.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 161.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 161.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 159.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 154.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 153.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 150.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 149.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 143.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 142.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 138.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 137.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 132.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 131.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 130.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 129.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 128.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 126.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 125.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 123.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 120.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 113.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 88.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

607.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 207.1
FF:10164-103B2 76 years, female 207.1
Nucleus accumbens
Scaled Tags Per Million: 335.3
FF:10037-101F1 23-56 years, mixed 335.3
Putamen
Scaled Tags Per Million: 270.6
FF:10176-103C5 60 years, female 270.6
Globus pallidus
Scaled Tags Per Million: 607.1
FF:10175-103C4 60 years, female 715.7
FF:10161-103A8 76 years, female 498.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

443.8
Pig sample Sample description nTPM
Caudate
nTPM: 143.1
Samples: 4

Max nTPM: 157.4
Min nTPM: 129.5
Sample A Female 157.4
Sample B Female 132.6
Sample C Male 152.9
Sample D Male 129.5
Putamen
nTPM: 443.8
Samples: 4

Max nTPM: 709.3
Min nTPM: 183.1
Sample A Female 709.3
Sample B Female 183.1
Sample C Male 316.8
Sample D Male 565.9
Septum
nTPM: 260.4
Samples: 4

Max nTPM: 328.0
Min nTPM: 183.3
Sample A Female 245.2
Sample B Female 183.3
Sample C Male 284.9
Sample D Male 328.0
Ventral pallidum
nTPM: 351.5
Samples: 4

Max nTPM: 501.5
Min nTPM: 128.7
Sample A Female 128.7
Sample B Female 279.9
Sample C Male 501.5
Sample D Male 495.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 79.2
Samples: 4

Max nTPM: 100.7
Min nTPM: 61.7
Sample A Male 61.7
Sample B Male 70.8
Sample C Female 83.5
Sample D Female 100.7
Septum
nTPM: 120.8
Samples: 4

Max nTPM: 132.3
Min nTPM: 95.0
Sample A Male 128.7
Sample B Male 95.0
Sample C Female 127.3
Sample D Female 132.3
Ventral forebrain
nTPM: 98.1
Samples: 4

Max nTPM: 111.8
Min nTPM: 91.0
Sample A Male 91.0
Sample B Male 96.4
Sample C Female 111.8
Sample D Female 93.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.8
670 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 3.8
671 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 3.6
Pallidum
Expression energy: 5.7
670 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 5.7
671 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 4.6

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