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CCDC85B
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  • CCDC85B
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:137.8 nTPM
HPA Brain:150.4 nTPM
GTEx:137.8 nTPM
FANTOM5:162.8 Scaled Tags Per Million
Pig:131.5 nTPM
Mouse:8.7 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA054415
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 137.3
2290 Female, age 72, unknown 163.0
1857 Female, age 85, left hemisphere 145.3
1781 Male, age 74, unknown 143.6
2846 Female, age 79, unknown 142.6
2288 Male, age 75, left hemisphere 138.5
2481 Female, age 94, left hemisphere 136.0
2289 Male, age 61, right hemisphere 127.2
1854 Male, age 80, left hemisphere 102.0
Globus pallidus, externus
nTPM: 118.3
2567 Female, age 72, unknown 155.0
2772 Female, age 79, unknown 146.3
1996 Male, age 80, right hemisphere 102.9
2646 Male, age 61, right hemisphere 97.3
2395 Male, age 75, both hemispheres 90.2
Globus pallidus, internus
nTPM: 104.5
2483 Female, age 94, right hemisphere 139.2
2287 Male, age 75, right hemisphere 111.6
2566 Female, age 72, unknown 110.6
1818 Male, age 74, unknown 98.6
2037 Male, age 80, right hemisphere 91.6
2111 Female, age 85, right hemisphere 90.4
2778 Female, age 91, both hemispheres 89.6
Nucleus accumbens
nTPM: 121.9
1783 Male, age 74, unknown 155.1
1806 Female, age 85, left hemisphere 151.2
2286 Male, age 75, left hemisphere 136.9
1856 Female, age 91, right hemisphere 131.1
2824 Male, age 61, right hemisphere 121.6
2698 Female, age 72, unknown 104.9
2391 Female, age 94, left hemisphere 91.4
2732 Male, age 80, right hemisphere 83.2
Nucleus basalis of Meynert
nTPM: 111.3
2484 Female, age 94, left hemisphere 134.9
2821 Male, age 75, both hemispheres 116.8
2569 Male, age 61, both hemispheres 100.2
2393 Male, age 80, right hemisphere 93.1
Nucleus of the diagonal band
nTPM: 150.4
2775 Male, age 80, right hemisphere 186.8
2195 Female, age 85, both hemispheres 170.8
2029 Male, age 61, right hemisphere 156.0
1812 Female, age 91, both hemispheres 139.3
1979 Male, age 74, unknown 99.2
Putamen
nTPM: 139.3
2647 Male, age 75, left hemisphere 188.9
2489 Female, age 72, unknown 158.7
2466 Female, age 79, unknown 151.1
1937 Female, age 91, right hemisphere 132.6
2482 Female, age 94, left hemisphere 124.4
1829 Male, age 74, unknown 110.7
1838 Male, age 80, right hemisphere 108.6
Septal nuclei
nTPM: 132.1
1960 Male, age 74, unknown 209.5
2059 Female, age 85, both hemispheres 153.2
2031 Female, age 72, unknown 135.7
2009 Female, age 91, both hemispheres 119.8
2629 Female, age 94, right hemisphere 105.9
2199 Male, age 80, right hemisphere 100.8
2394 Male, age 61, left hemisphere 99.9
Stria terminalis, bed nucleus
nTPM: 128.4
1974 Female, age 91, both hemispheres 162.6
2486 Female, age 94, both hemispheres 130.5
2201 Male, age 74, unknown 92.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 121.5
Samples: 246

Max nTPM: 380.8
Min nTPM: 31.8
Std nTPM: 54.4
Median nTPM: 115.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 380.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 349.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 320.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 301.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 284.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 274.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 242.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 232.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 231.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 227.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 227.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 223.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 222.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 222.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 205.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 204.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 203.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 202.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 199.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 199.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 191.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 190.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 188.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 186.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 185.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 185.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 183.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 179.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 175.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 173.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 172.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 170.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 169.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 167.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 167.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 166.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 165.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 165.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 165.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 164.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 164.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 163.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 162.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 161.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 160.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 158.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 158.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 157.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 157.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 155.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 155.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 154.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 154.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 152.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 151.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 150.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 150.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 150.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 149.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 148.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 148.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 146.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 144.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 144.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 143.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 142.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 140.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 140.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 139.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 138.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 138.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 138.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 137.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 136.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 136.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 136.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 135.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 135.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 135.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 134.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 134.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 133.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 133.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 132.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 132.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 132.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 131.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 131.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 131.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 130.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 129.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 129.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 128.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 128.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 128.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 126.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 126.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 126.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 124.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 124.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 124.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 124.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 124.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 123.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 121.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 121.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 120.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 120.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 119.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 119.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 118.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 118.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 118.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 117.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 117.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 117.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 116.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 116.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 115.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 115.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 115.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 114.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 113.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 112.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 112.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 112.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 112.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 111.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 111.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 111.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 111.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 110.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 110.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 109.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 109.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 109.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 108.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 107.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 107.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 106.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 106.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 106.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 105.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 105.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 105.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 105.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 105.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 104.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 104.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 104.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 104.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 103.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 102.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 102.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 102.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 102.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 100.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 98.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 98.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 97.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 97.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 97.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 97.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 96.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 96.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 96.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 95.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 95.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 94.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 92.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 92.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 91.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 91.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 91.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 91.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 89.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 89.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 87.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 87.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 86.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 86.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 85.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 85.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 84.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 82.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 82.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 81.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 80.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 80.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 80.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 79.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 78.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 78.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 75.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 74.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 72.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 71.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 71.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 70.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 70.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 70.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 68.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 66.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 65.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 64.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 62.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 61.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 61.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 60.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 56.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 54.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 52.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 51.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 51.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 49.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 49.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 48.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 48.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 48.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 45.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 45.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 41.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 38.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 35.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 35.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 34.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 32.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 31.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 122.8
Samples: 246

Max nTPM: 415.4
Min nTPM: 19.9
Std nTPM: 55.3
Median nTPM: 115.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 415.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 315.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 299.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 282.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 275.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 270.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 251.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 248.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 245.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 225.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 219.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 219.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 213.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 212.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 212.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 210.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 209.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 206.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 205.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 204.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 204.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 202.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 200.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 199.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 199.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 190.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 187.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 184.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 184.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 183.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 182.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 182.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 181.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 178.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 175.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 174.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 172.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 172.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 172.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 169.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 169.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 167.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 166.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 166.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 166.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 165.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 163.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 163.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 163.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 160.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 160.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 158.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 158.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 157.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 157.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 156.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 156.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 155.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 155.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 153.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 152.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 151.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 151.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 149.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 149.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 148.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 147.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 146.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 145.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 145.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 144.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 144.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 142.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 141.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 140.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 140.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 140.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 140.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 138.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 138.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 138.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 137.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 137.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 136.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 136.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 135.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 135.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 133.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 133.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 133.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 132.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 132.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 132.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 131.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 131.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 130.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 127.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 125.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 125.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 125.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 124.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 123.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 123.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 123.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 122.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 121.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 121.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 120.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 119.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 118.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 118.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 118.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 118.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 118.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 118.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 118.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 118.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 118.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 116.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 116.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 116.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 115.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 115.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 114.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 114.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 113.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 113.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 112.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 112.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 112.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 110.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 110.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 110.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 110.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 110.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 110.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 108.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 107.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 107.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 106.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 106.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 105.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 105.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 105.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 104.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 104.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 103.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 103.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 103.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 101.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 101.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 101.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 101.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 101.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 101.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 100.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 100.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 98.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 98.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 97.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 96.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 96.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 95.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 95.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 94.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 94.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 94.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 92.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 91.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 91.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 91.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 90.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 90.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 89.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 89.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 89.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 88.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 88.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 88.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 88.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 87.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 86.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 86.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 86.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 84.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 84.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 83.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 83.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 83.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 83.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 82.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 82.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 82.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 81.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 81.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 80.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 79.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 79.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 78.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 77.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 77.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 76.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 75.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 74.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 73.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 73.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 73.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 71.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 71.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 70.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 69.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 69.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 69.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 68.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 67.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 67.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 67.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 65.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 65.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 64.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 59.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 57.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 57.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 56.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 55.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 55.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 55.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 54.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 51.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 51.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 51.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 51.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 50.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 50.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 48.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 44.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 43.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 41.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 40.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 40.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 33.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 26.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 24.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 19.9
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Brain - Putamen (basal ganglia)
Average nTPM: 137.8
Samples: 205

Max nTPM: 335.1
Min nTPM: 36.4
Std nTPM: 48.0
Median nTPM: 136.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 335.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 275.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 266.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 257.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 255.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 235.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 228.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 221.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 219.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 218.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 217.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 217.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 213.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 212.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 209.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 209.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 208.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 206.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 206.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 199.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 198.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 198.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 195.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 195.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 195.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 193.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 191.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 190.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 185.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 184.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 182.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 182.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 181.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 180.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 179.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 178.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 178.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 177.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 177.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 177.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 177.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 176.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 175.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 174.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 174.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 172.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 171.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 170.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 169.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 168.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 168.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 167.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 166.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 165.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 162.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 161.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 160.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 160.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 159.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 159.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 159.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 159.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 158.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 157.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 156.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 155.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 154.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 154.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 154.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 153.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 153.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 152.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 151.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 150.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 150.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 149.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 148.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 148.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 148.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 148.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 147.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 147.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 147.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 147.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 147.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 146.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 146.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 145.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 145.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 144.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 143.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 142.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 141.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 141.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 141.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 139.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 139.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 139.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 139.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 138.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 137.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 136.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 136.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 135.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 135.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 134.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 134.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 134.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 134.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 132.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 132.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 132.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 131.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 131.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 131.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 130.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 128.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 128.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 127.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 127.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 127.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 126.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 124.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 121.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 120.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 120.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 119.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 119.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 118.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 118.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 118.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 116.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 116.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 115.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 115.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 114.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 114.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 113.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 112.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 112.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 111.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 110.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 110.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 109.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 109.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 109.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 107.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 107.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 107.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 106.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 106.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 105.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 102.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 101.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 101.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 100.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 99.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 99.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 96.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 96.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 95.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 94.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 94.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 92.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 92.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 91.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 90.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 90.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 90.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 89.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 89.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 87.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 86.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 86.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 85.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 85.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 84.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 82.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 81.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 81.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 80.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 80.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 80.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 80.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 79.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 75.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 73.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 71.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 71.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 70.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 69.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 65.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 65.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 65.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 64.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 64.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 63.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 61.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 53.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 51.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 51.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

162.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 135.5
FF:10164-103B2 76 years, female 135.5
Nucleus accumbens
Scaled Tags Per Million: 162.8
FF:10037-101F1 23-56 years, mixed 162.8
Putamen
Scaled Tags Per Million: 151.7
FF:10176-103C5 60 years, female 151.7
Globus pallidus
Scaled Tags Per Million: 129.8
FF:10175-103C4 60 years, female 167.9
FF:10161-103A8 76 years, female 91.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.5
Pig sample Sample description nTPM
Caudate
nTPM: 125.2
Samples: 4

Max nTPM: 146.3
Min nTPM: 99.4
Sample A Female 99.4
Sample B Female 140.2
Sample C Male 146.3
Sample D Male 114.7
Putamen
nTPM: 131.5
Samples: 4

Max nTPM: 172.8
Min nTPM: 77.0
Sample A Female 77.0
Sample B Female 127.8
Sample C Male 172.8
Sample D Male 148.5
Septum
nTPM: 80.7
Samples: 4

Max nTPM: 95.1
Min nTPM: 51.1
Sample A Female 95.1
Sample B Female 95.1
Sample C Male 51.1
Sample D Male 81.4
Ventral pallidum
nTPM: 99.2
Samples: 4

Max nTPM: 125.9
Min nTPM: 78.7
Sample A Female 98.1
Sample B Female 125.9
Sample C Male 78.7
Sample D Male 94.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 8.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 6.9
Sample A Male 8.9
Sample B Male 11.4
Sample C Female 7.7
Sample D Female 6.9
Septum
nTPM: 6.5
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.4
Sample A Male 7.0
Sample B Male 6.6
Sample C Female 6.9
Sample D Female 5.4
Ventral forebrain
nTPM: 6.9
Samples: 4

Max nTPM: 7.8
Min nTPM: 6.0
Sample A Male 7.8
Sample B Male 6.2
Sample C Female 7.6
Sample D Female 6.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
71574362 Antisense, RP_050915_03_F02, Mouse strain C57BL/6J (56 days, male) 1.2
Pallidum
Expression energy: 1.0
71574362 Antisense, RP_050915_03_F02, Mouse strain C57BL/6J (56 days, male) 1.0

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