PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:162.6 nTPM
FANTOM5:139.4 Scaled Tags Per Million
Pig:83.9 nTPM
Mouse:4.3 nTPM
Allen mouse:2.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 162.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 83.9
1984 Male, age 76, both hemispheres 106.6
2301 Female, age 85, both hemispheres 82.0
2188 Female, age 91, both hemispheres 74.9
2090 Male, age 80, both hemispheres 72.2
Area postrema
nTPM: 72.0
2306 Male, age 80, both hemispheres 77.0
2054 Male, age 76, both hemispheres 72.0
2799 Male, age 61, both hemispheres 67.1
Dorsal cochlear nucleus
nTPM: 102.7
2802 Male, age 74, right hemisphere 143.9
2058 Male, age 76, both hemispheres 97.9
2187 Female, age 91, both hemispheres 93.9
2370 Male, age 61, both hemispheres 93.3
2378 Male, age 80, both hemispheres 84.3
Dorsal medullary reticular nucleus
nTPM: 105.0
2040 Female, age 85, both hemispheres 111.0
2088 Male, age 76, both hemispheres 109.5
2373 Male, age 61, both hemispheres 94.6
Dorsal motor vagal complex
nTPM: 104.8
2133 Female, age 91, both hemispheres 144.9
2000 Male, age 74, unknown 127.3
2797 Male, age 61, both hemispheres 117.6
2844 Male, age 55, unknown 112.4
2643 Male, age 74, both hemispheres 108.6
2185 Male, age 76, both hemispheres 102.4
2807 Female, age 85, both hemispheres 64.7
2813 Female, age 72, unknown 60.8
Dorsal tegmental nucleus
nTPM: 98.5
2083 Male, age 80, both hemispheres 114.3
2326 Male, age 74, both hemispheres 102.7
1936 Male, age 76, left hemisphere 101.9
2358 Male, age 61, both hemispheres 75.2
Dorsolateral tegmental area
nTPM: 88.6
2654 Male, age 80, both hemispheres 116.0
2751 Female, age 85, both hemispheres 97.3
2141 Male, age 76, both hemispheres 88.2
2337 Male, age 61, both hemispheres 71.4
2360 Male, age 74, both hemispheres 70.3
Gigantocellular reticular nuclei, medullary
nTPM: 98.9
2462 Male, age 74, both hemispheres 118.6
2310 Male, age 80, both hemispheres 114.5
2022 Male, age 76, right hemisphere 100.8
2314 Male, age 61, both hemispheres 96.5
2387 Female, age 91, both hemispheres 82.8
1876 Female, age 85, both hemispheres 80.6
Gigantocellular reticular nuclei, pars
nTPM: 108.3
2168 Male, age 76, both hemispheres 130.6
2084 Female, age 85, both hemispheres 128.5
2336 Male, age 61, both hemispheres 106.3
2330 Male, age 80, both hemispheres 92.7
2706 Male, age 80, both hemispheres 83.4
Inferior olive
nTPM: 88.3
2085 Female, age 85, both hemispheres 106.0
2628 Female, age 91, both hemispheres 92.7
2563 Male, age 74, both hemispheres 90.8
2178 Male, age 61, both hemispheres 86.3
2379 Male, age 80, both hemispheres 65.6
Kolliker-Fuse nucleus
nTPM: 103.7
2163 Male, age 80, both hemispheres 142.6
2793 Female, age 91, left hemisphere 92.2
2315 Male, age 76, right hemisphere 76.3
Lateral lemniscal nuclei
nTPM: 103.4
2169 Male, age 76, both hemispheres 128.4
2453 Male, age 74, right hemisphere 122.1
2320 Female, age 91, left hemisphere 107.2
2746 Female, age 85, left hemisphere 95.6
2036 Male, age 80, both hemispheres 63.5
Lateral medullary reticular nucleus
nTPM: 83.9
2804 Female, age 91, both hemispheres 106.1
2044 Male, age 76, both hemispheres 105.0
2374 Male, age 61, both hemispheres 76.1
2190 Female, age 85, both hemispheres 75.6
2852 Male, age 80, both hemispheres 72.4
2305 Male, age 74, both hemispheres 68.3
Lateral parabrachial nucleus
nTPM: 78.8
2139 Female, age 85, right hemisphere 102.2
2790 Male, age 61, both hemispheres 80.8
2013 Male, age 80, both hemispheres 78.6
2792 Male, age 76, both hemispheres 53.7
Lateral vestibular nucleus
nTPM: 138.8
2184 Male, age 76, both hemispheres 164.8
2311 Male, age 80, both hemispheres 112.8
Locus coeruleus
nTPM: 97.5
2123 Female, age 91, both hemispheres 116.1
2720 Male, age 74, both hemispheres 103.7
2162 Male, age 80, both hemispheres 102.1
2317 Female, age 72, unknown 101.7
1980 Male, age 76, both hemispheres 98.6
2014 Male, age 55, unknown 98.4
2788 Male, age 74, unknown 61.8
Medial olivary nucleus
nTPM: 70.5
2138 Female, age 91, both hemispheres 84.2
1943 Male, age 61, both hemispheres 77.2
2851 Male, age 80, both hemispheres 62.9
1962 Male, age 76, both hemispheres 57.8
Medial parabrachial nucleus
nTPM: 111.8
2170 Female, age 91, both hemispheres 134.3
2156 Male, age 61, both hemispheres 128.0
2463 Female, age 85, right hemisphere 115.6
2786 Male, age 76, both hemispheres 97.5
2854 Male, age 80, both hemispheres 83.6
Medial periolivary nuclei
nTPM: 107.2
2063 Male, age 76, both hemispheres 149.5
2171 Female, age 85, both hemispheres 136.2
2458 Female, age 91, both hemispheres 99.1
2081 Male, age 80, both hemispheres 84.4
2791 Male, age 74, right hemisphere 66.7
Medial vestibular nucleus
nTPM: 113.9
2134 Male, age 76, both hemispheres 136.8
2093 Male, age 80, both hemispheres 126.7
2624 Male, age 61, both hemispheres 119.4
2803 Female, age 91, both hemispheres 110.8
2743 Female, age 85, both hemispheres 101.3
2801 Male, age 74, both hemispheres 88.6
Motor facial nucleus
nTPM: 114.6
2062 Male, age 76, both hemispheres 170.9
2795 Female, age 91, both hemispheres 129.6
2327 Male, age 80, both hemispheres 111.7
2126 Male, age 61, both hemispheres 108.5
2697 Female, age 85, both hemispheres 85.4
2365 Male, age 74, right hemisphere 81.6
Motor hypoglossal nucleus
nTPM: 111.4
2125 Female, age 91, both hemispheres 135.3
2132 Female, age 85, both hemispheres 123.4
2182 Male, age 80, both hemispheres 105.5
2461 Male, age 61, both hemispheres 105.5
2277 Male, age 76, both hemispheres 87.3
Motor trigeminal nucleus
nTPM: 106.2
2335 Male, age 61, both hemispheres 116.3
2560 Male, age 74, both hemispheres 112.1
2309 Male, age 76, both hemispheres 109.9
2079 Male, age 80, both hemispheres 104.8
2321 Female, age 91, both hemispheres 87.7
Nuclei of the trapezoid body
nTPM: 134.6
1983 Male, age 76, both hemispheres 157.3
2159 Male, age 61, both hemispheres 155.8
2735 Female, age 85, both hemispheres 136.6
2368 Female, age 91, both hemispheres 113.1
2166 Male, age 80, both hemispheres 110.2
Nucleus ambiguus
nTPM: 162.6
2096 Female, age 85, both hemispheres 247.8
2071 Male, age 76, both hemispheres 77.4
Nucleus cuneatus
nTPM: 95.8
2131 Male, age 76, both hemispheres 136.9
2100 Male, age 76, both hemispheres 130.0
2564 Male, age 74, both hemispheres 126.7
2805 Female, age 91, both hemispheres 113.4
2562 Male, age 61, both hemispheres 98.2
2376 Male, age 61, both hemispheres 82.0
2381 Male, age 80, both hemispheres 65.5
2808 Female, age 85, both hemispheres 56.4
2380 Male, age 80, both hemispheres 52.9
Nucleus gracilis
nTPM: 67.5
2299 Female, age 85, both hemispheres 85.5
2627 Male, age 74, both hemispheres 63.3
2382 Male, age 80, both hemispheres 53.8
Nucleus raphe magnus
nTPM: 119.6
2172 Female, age 85, both hemispheres 134.1
2160 Male, age 61, both hemispheres 125.5
2051 Male, age 76, both hemispheres 119.7
2328 Male, age 80, both hemispheres 118.0
2455 Male, age 74, both hemispheres 115.9
2459 Female, age 91, both hemispheres 104.2
Nucleus raphe obscurus
nTPM: 66.3
2800 Male, age 61, midline 75.5
2845 Female, age 85, midline 71.3
2142 Male, age 76, midline 52.0
Nucleus raphe pallidus
nTPM: 81.2
2183 Male, age 80, midline 90.9
1924 Male, age 61, midline 78.1
2145 Male, age 76, midline 74.8
Nucleus tractus solitarii
nTPM: 85.8
2307 Male, age 80, both hemispheres 97.5
2191 Female, age 85, both hemispheres 93.8
2656 Male, age 76, both hemispheres 91.6
2144 Female, age 91, right hemisphere 60.4
Paramedian reticular nucleus
nTPM: 95.9
2057 Male, age 80, both hemispheres 119.6
2313 Male, age 61, both hemispheres 111.5
2050 Female, age 85, both hemispheres 95.1
2052 Male, age 76, both hemispheres 57.6
Parvicellular reticular nuclei
nTPM: 112.6
2558 Male, age 74, both hemispheres 119.8
2119 Male, age 80, both hemispheres 112.5
2095 Male, age 76, both hemispheres 105.5
Parvicellular reticular nuclei, medullary
nTPM: 124.9
2091 Female, age 85, both hemispheres 139.6
2189 Female, age 91, both hemispheres 124.0
2181 Male, age 80, left hemisphere 111.1
Pedunculopontine tegmental nucleus
nTPM: 85.9
2334 Male, age 80, both hemispheres 97.7
1921 Female, age 85, both hemispheres 94.0
2338 Male, age 61, both hemispheres 66.1
Peritrigeminal nucleus
nTPM: 97.5
2067 Female, age 85, both hemispheres 102.6
2136 Male, age 76, both hemispheres 95.7
2179 Male, age 61, both hemispheres 94.2
Pontine nuclei
nTPM: 125.5
1863 Male, age 55, unknown 155.4
1968 Male, age 76, left hemisphere 152.2
2787 Female, age 85, both hemispheres 150.9
2454 Male, age 74, left hemisphere 121.3
2109 Female, age 72, unknown 116.7
2727 Male, age 61, right hemisphere 110.1
2115 Male, age 80, left hemisphere 101.0
2319 Female, age 91, both hemispheres 96.8
Pontine raphe nucleus
nTPM: 104.9
2122 Female, age 85, midline 110.2
2853 Male, age 76, midline 99.6
Posteroventral cochlear nucleus
nTPM: 89.3
2752 Female, age 85, both hemispheres 134.9
2070 Male, age 76, both hemispheres 101.1
2371 Male, age 61, both hemispheres 93.6
2341 Male, age 80, both hemispheres 59.5
2135 Female, age 91, both hemispheres 57.4
Prepositus hypoglossal nucleus
nTPM: 101.4
2086 Male, age 80, both hemispheres 109.5
2855 Female, age 85, right hemisphere 93.2
Principal sensory trigeminal nucleus
nTPM: 117.8
2324 Male, age 76, both hemispheres 146.1
2158 Male, age 61, both hemispheres 137.5
2008 Male, age 80, left hemisphere 96.5
2367 Female, age 91, left hemisphere 91.3
Reticular pontine nucleus, caudal
nTPM: 124.6
2457 Female, age 91, both hemispheres 138.9
2332 Male, age 80, right hemisphere 130.7
2092 Male, age 76, both hemispheres 117.4
2559 Male, age 74, both hemispheres 111.3
Reticular pontine nucleus, oral
nTPM: 96.6
2167 Male, age 76, both hemispheres 112.9
1939 Male, age 80, both hemispheres 95.8
2361 Male, age 74, both hemispheres 94.0
2012 Female, age 85, both hemispheres 90.5
2366 Female, age 91, both hemispheres 90.0
Reticulotegmental nucleus
nTPM: 124.9
2452 Male, age 74, both hemispheres 135.3
2322 Female, age 91, both hemispheres 132.3
2325 Male, age 76, both hemispheres 126.2
2333 Male, age 80, both hemispheres 105.7
Spinal trigeminal nucleus, caudal
nTPM: 115.7
2447 Male, age 76, both hemispheres 158.0
2390 Female, age 91, both hemispheres 157.5
2308 Male, age 80, both hemispheres 98.0
2642 Male, age 74, both hemispheres 87.2
2312 Male, age 61, both hemispheres 77.6
Spinal trigeminal nucleus, interpolar
nTPM: 120.1
2625 Male, age 61, both hemispheres 176.7
2033 Male, age 80, both hemispheres 115.6
2066 Male, age 76, right hemisphere 112.9
2389 Female, age 91, both hemispheres 104.5
2386 Female, age 85, both hemispheres 91.0
Spinal trigeminal nucleus, oral
nTPM: 136.2
2164 Male, age 80, both hemispheres 168.9
2737 Female, age 85, both hemispheres 120.4
1978 Male, age 76, both hemispheres 119.2
Spinal vestibular nucleus
nTPM: 119.0
2780 Male, age 80, both hemispheres 130.7
2384 Male, age 74, both hemispheres 129.8
2186 Female, age 91, both hemispheres 124.4
2748 Male, age 76, both hemispheres 117.5
2796 Male, age 61, both hemispheres 109.0
2806 Female, age 85, both hemispheres 102.3
Subcoeruleus area
nTPM: 99.2
2451 Male, age 74, both hemispheres 116.6
2323 Female, age 91, left hemisphere 111.1
2089 Male, age 76, left hemisphere 103.1
1958 Male, age 80, both hemispheres 87.2
2369 Female, age 85, left hemisphere 78.0
Superior olive
nTPM: 93.6
2561 Female, age 91, both hemispheres 110.2
2329 Male, age 80, right hemisphere 104.5
2020 Male, age 76, both hemispheres 97.9
1875 Female, age 85, both hemispheres 89.5
2364 Male, age 74, right hemisphere 65.7
Superior vestibular nucleus
nTPM: 90.8
2015 Male, age 80, both hemispheres 104.7
2061 Male, age 76, both hemispheres 104.5
2383 Male, age 74, both hemispheres 63.3
Ventral medullary reticular nucleus
nTPM: 90.9
2060 Male, age 76, both hemispheres 105.1
2372 Male, age 61, both hemispheres 76.8
Ventral periolivary nuclei
nTPM: 100.4
2165 Male, age 80, both hemispheres 127.4
2130 Female, age 85, both hemispheres 102.9
2794 Female, age 91, left hemisphere 88.1
2023 Male, age 76, both hemispheres 83.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 101.3
2302 Female, age 91, both hemispheres 119.4
2741 Female, age 85, both hemispheres 115.6
1986 Male, age 76, both hemispheres 97.0
2180 Male, age 61, both hemispheres 94.2
2118 Male, age 80, both hemispheres 80.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 99.1
2456 Female, age 91, both hemispheres 114.4
2449 Male, age 74, both hemispheres 111.0
2161 Male, age 80, both hemispheres 103.6
1959 Male, age 76, both hemispheres 100.5
2840 Female, age 85, both hemispheres 93.2
2359 Male, age 61, both hemispheres 71.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 139.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 139.4
FF:10182-103D2 60 years, female 165.3
FF:10165-103B3 76 years, female 113.5
Medulla oblongata
Scaled Tags Per Million: 69.6
FF:10038-101F2 18-64 years, mixed 76.2
FF:10174-103C3 60 years, female 74.0
FF:10155-103A2 76 years, female 58.5
Pons
Scaled Tags Per Million: 112.3
FF:10033-101E6 18-54 years, mixed 112.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 83.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 67.6
Samples: 4

Max nTPM: 90.7
Min nTPM: 50.6
Sample A Female 58.7
Sample B Female 70.4
Sample C Male 90.7
Sample D Male 50.6
Pons
nTPM: 83.9
Samples: 4

Max nTPM: 106.6
Min nTPM: 54.4
Sample A Female 92.4
Sample B Female 54.4
Sample C Male 82.2
Sample D Male 106.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 4.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 4.3
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.6
Sample A Male 5.5
Sample B Male 4.1
Sample C Female 3.6
Sample D Female 4.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.8
71574362 Antisense, RP_050915_03_F02, Mouse strain C57BL/6J (56 days, male) 2.8
Pons
Expression energy: 1.7
71574362 Antisense, RP_050915_03_F02, Mouse strain C57BL/6J (56 days, male) 1.7

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