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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Neuronal projections: Not detected
Synapses: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:447.1 nTPM
HPA Brain:735.3 nTPM
GTEx:447.1 nTPM
FANTOM5:433.9 Scaled Tags Per Million
Pig:493.7 nTPM
Mouse:1271.4 nTPM
Allen mouse:16.5 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA057790
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections High
Synapses Not detected

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057790
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

735.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 643.7
2290 Female, age 72, unknown 849.4
2846 Female, age 79, unknown 792.3
1857 Female, age 85, left hemisphere 791.8
2289 Male, age 61, right hemisphere 739.1
1854 Male, age 80, left hemisphere 614.1
2288 Male, age 75, left hemisphere 525.6
1781 Male, age 74, unknown 439.0
2481 Female, age 94, left hemisphere 398.3
Globus pallidus, externus
nTPM: 214.3
2646 Male, age 61, right hemisphere 339.2
2567 Female, age 72, unknown 231.4
2395 Male, age 75, both hemispheres 178.6
1996 Male, age 80, right hemisphere 167.2
2772 Female, age 79, unknown 155.2
Globus pallidus, internus
nTPM: 175.6
2483 Female, age 94, right hemisphere 296.5
2111 Female, age 85, right hemisphere 188.8
2566 Female, age 72, unknown 169.8
1818 Male, age 74, unknown 152.1
2287 Male, age 75, right hemisphere 151.8
2037 Male, age 80, right hemisphere 140.0
2778 Female, age 91, both hemispheres 130.3
Nucleus accumbens
nTPM: 480.9
2824 Male, age 61, right hemisphere 716.5
1783 Male, age 74, unknown 668.3
1806 Female, age 85, left hemisphere 626.8
1856 Female, age 91, right hemisphere 489.6
2286 Male, age 75, left hemisphere 454.9
2698 Female, age 72, unknown 392.6
2391 Female, age 94, left hemisphere 282.2
2732 Male, age 80, right hemisphere 216.4
Nucleus basalis of Meynert
nTPM: 541.0
2484 Female, age 94, left hemisphere 634.8
2393 Male, age 80, right hemisphere 619.3
2569 Male, age 61, both hemispheres 505.5
2821 Male, age 75, both hemispheres 404.4
Nucleus of the diagonal band
nTPM: 90.6
1812 Female, age 91, both hemispheres 103.8
2029 Male, age 61, right hemisphere 101.7
1979 Male, age 74, unknown 95.9
2195 Female, age 85, both hemispheres 79.3
2775 Male, age 80, right hemisphere 72.1
Putamen
nTPM: 735.3
2489 Female, age 72, unknown 983.4
1829 Male, age 74, unknown 880.4
2647 Male, age 75, left hemisphere 853.5
2466 Female, age 79, unknown 816.2
1838 Male, age 80, right hemisphere 678.7
1937 Female, age 91, right hemisphere 493.6
2482 Female, age 94, left hemisphere 441.3
Septal nuclei
nTPM: 89.4
2394 Male, age 61, left hemisphere 153.8
2059 Female, age 85, both hemispheres 113.7
1960 Male, age 74, unknown 85.7
2629 Female, age 94, right hemisphere 74.3
2031 Female, age 72, unknown 70.8
2009 Female, age 91, both hemispheres 64.1
2199 Male, age 80, right hemisphere 63.1
Stria terminalis, bed nucleus
nTPM: 99.2
2486 Female, age 94, both hemispheres 145.8
2201 Male, age 74, unknown 81.9
1974 Female, age 91, both hemispheres 69.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

447.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 423.5
Samples: 246

Max nTPM: 957.9
Min nTPM: 33.5
Std nTPM: 182.6
Median nTPM: 423.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 957.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 896.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 862.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 861.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 842.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 817.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 797.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 793.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 782.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 778.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 763.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 746.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 746.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 723.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 721.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 715.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 699.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 691.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 680.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 676.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 670.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 663.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 663.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 661.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 660.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 657.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 656.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 651.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 647.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 643.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 632.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 632.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 632.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 631.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 625.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 625.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 622.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 614.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 613.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 612.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 606.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 600.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 582.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 578.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 578.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 577.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 576.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 574.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 571.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 571.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 568.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 565.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 562.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 559.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 558.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 558.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 555.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 552.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 547.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 547.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 546.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 545.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 544.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 542.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 541.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 540.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 538.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 534.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 532.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 531.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 531.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 527.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 525.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 524.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 521.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 512.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 511.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 509.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 505.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 505.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 504.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 504.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 504.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 503.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 502.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 501.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 495.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 495.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 494.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 487.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 487.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 486.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 483.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 478.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 476.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 476.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 475.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 473.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 471.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 471.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 469.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 466.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 461.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 460.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 458.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 454.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 449.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 448.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 448.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 446.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 445.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 443.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 443.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 439.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 438.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 437.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 437.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 436.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 436.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 435.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 429.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 423.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 423.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 423.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 422.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 420.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 418.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 417.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 416.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 415.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 415.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 414.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 413.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 410.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 408.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 405.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 404.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 401.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 400.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 400.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 399.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 392.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 385.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 384.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 382.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 374.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 373.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 372.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 370.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 364.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 361.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 360.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 360.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 358.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 358.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 354.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 352.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 350.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 339.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 338.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 337.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 336.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 335.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 335.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 335.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 331.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 327.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 325.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 323.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 319.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 317.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 313.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 313.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 303.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 302.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 300.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 300.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 299.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 298.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 297.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 286.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 286.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 285.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 283.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 282.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 281.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 278.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 276.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 273.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 273.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 272.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 269.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 261.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 254.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 254.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 249.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 246.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 244.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 244.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 243.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 235.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 235.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 230.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 229.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 228.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 226.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 220.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 218.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 217.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 215.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 208.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 204.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 203.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 203.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 203.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 202.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 201.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 197.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 193.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 190.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 186.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 183.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 179.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 174.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 173.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 172.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 171.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 170.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 168.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 168.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 166.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 165.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 156.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 135.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 133.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 125.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 125.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 125.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 95.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 93.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 88.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 84.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 76.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 62.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 33.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 373.4
Samples: 246

Max nTPM: 810.1
Min nTPM: 27.2
Std nTPM: 156.5
Median nTPM: 378.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 810.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 791.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 768.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 730.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 722.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 721.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 705.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 689.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 687.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 652.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 644.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 642.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 613.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 598.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 594.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 594.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 593.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 592.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 589.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 574.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 573.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 572.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 572.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 565.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 562.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 560.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 558.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 555.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 549.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 549.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 547.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 547.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 546.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 545.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 544.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 540.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 539.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 534.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 531.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 530.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 526.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 522.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 520.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 519.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 513.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 510.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 502.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 499.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 493.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 489.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 488.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 481.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 475.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 475.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 475.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 473.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 472.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 472.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 471.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 471.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 470.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 469.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 467.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 466.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 462.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 462.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 460.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 459.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 458.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 451.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 451.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 449.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 449.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 448.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 446.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 442.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 439.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 439.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 438.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 437.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 437.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 436.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 435.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 434.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 431.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 430.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 430.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 428.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 427.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 427.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 425.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 423.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 422.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 421.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 421.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 421.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 421.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 420.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 418.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 418.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 416.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 411.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 406.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 404.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 402.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 402.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 397.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 394.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 394.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 389.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 388.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 388.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 387.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 387.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 386.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 386.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 385.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 385.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 384.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 382.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 382.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 381.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 380.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 377.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 376.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 375.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 374.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 371.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 369.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 367.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 366.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 365.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 364.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 363.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 363.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 361.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 360.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 359.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 358.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 356.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 355.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 353.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 352.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 351.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 350.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 350.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 349.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 349.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 349.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 347.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 347.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 347.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 345.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 343.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 339.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 339.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 339.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 338.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 335.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 334.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 333.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 332.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 330.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 330.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 329.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 327.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 321.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 319.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 319.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 316.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 314.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 311.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 311.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 304.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 303.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 302.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 301.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 297.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 295.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 288.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 287.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 287.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 286.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 283.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 280.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 278.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 278.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 271.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 269.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 267.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 265.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 264.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 263.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 259.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 258.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 256.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 246.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 239.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 234.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 231.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 226.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 225.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 222.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 217.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 216.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 216.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 212.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 210.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 208.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 203.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 196.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 186.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 185.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 183.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 178.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 175.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 166.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 163.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 157.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 154.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 154.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 148.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 140.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 130.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 129.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 128.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 128.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 122.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 114.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 108.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 105.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 102.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 101.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 78.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 76.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 73.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 72.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 72.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 67.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 60.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 54.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 53.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 49.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 31.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 27.2
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Brain - Putamen (basal ganglia)
Average nTPM: 447.1
Samples: 205

Max nTPM: 1014.2
Min nTPM: 79.1
Std nTPM: 192.2
Median nTPM: 452.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1014.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 915.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 908.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 837.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 811.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 798.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 793.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 790.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 788.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 786.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 781.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 778.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 775.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 768.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 762.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 754.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 752.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 742.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 732.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 717.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 699.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 690.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 690.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 686.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 679.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 658.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 658.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 658.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 655.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 651.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 643.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 635.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 630.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 629.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 629.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 628.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 626.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 616.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 614.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 609.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 608.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 604.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 603.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 602.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 600.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 600.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 599.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 596.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 595.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 594.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 585.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 582.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 576.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 573.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 563.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 562.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 561.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 560.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 554.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 550.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 549.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 543.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 537.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 535.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 532.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 531.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 527.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 525.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 522.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 518.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 517.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 516.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 515.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 512.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 512.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 509.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 508.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 508.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 502.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 499.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 493.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 490.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 489.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 488.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 486.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 484.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 483.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 483.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 477.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 476.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 470.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 468.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 463.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 459.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 458.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 457.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 457.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 457.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 457.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 456.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 456.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 454.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 452.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 451.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 451.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 450.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 449.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 445.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 443.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 442.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 438.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 435.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 430.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 427.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 425.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 418.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 417.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 412.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 412.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 408.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 406.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 402.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 401.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 399.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 395.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 394.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 389.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 388.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 387.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 384.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 381.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 376.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 376.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 371.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 371.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 366.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 364.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 358.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 354.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 351.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 347.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 344.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 342.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 342.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 336.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 331.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 330.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 323.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 322.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 322.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 320.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 315.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 313.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 312.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 311.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 306.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 295.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 289.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 287.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 286.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 286.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 272.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 265.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 255.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 254.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 252.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 249.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 249.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 241.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 220.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 219.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 216.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 213.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 212.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 212.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 210.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 209.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 209.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 205.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 202.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 198.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 192.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 188.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 186.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 181.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 180.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 178.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 177.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 176.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 174.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 169.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 163.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 158.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 154.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 141.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 138.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 132.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 129.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 123.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 105.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 99.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 97.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 90.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 80.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 79.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

433.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 408.4
FF:10164-103B2 76 years, female 408.4
Nucleus accumbens
Scaled Tags Per Million: 348.1
FF:10037-101F1 23-56 years, mixed 348.1
Putamen
Scaled Tags Per Million: 433.9
FF:10176-103C5 60 years, female 433.9
Globus pallidus
Scaled Tags Per Million: 248.2
FF:10175-103C4 60 years, female 339.0
FF:10161-103A8 76 years, female 157.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

493.7
Pig sample Sample description nTPM
Caudate
nTPM: 493.7
Samples: 4

Max nTPM: 625.1
Min nTPM: 341.8
Sample A Female 341.8
Sample B Female 521.4
Sample C Male 625.1
Sample D Male 486.5
Putamen
nTPM: 480.5
Samples: 4

Max nTPM: 661.4
Min nTPM: 156.3
Sample A Female 156.3
Sample B Female 544.4
Sample C Male 661.4
Sample D Male 559.9
Septum
nTPM: 163.5
Samples: 4

Max nTPM: 285.4
Min nTPM: 48.5
Sample A Female 269.6
Sample B Female 285.4
Sample C Male 48.5
Sample D Male 50.3
Ventral pallidum
nTPM: 310.4
Samples: 4

Max nTPM: 381.6
Min nTPM: 132.8
Sample A Female 372.9
Sample B Female 381.6
Sample C Male 132.8
Sample D Male 354.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1271.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1271.4
Samples: 4

Max nTPM: 1337.2
Min nTPM: 1171.5
Sample A Male 1266.8
Sample B Male 1337.2
Sample C Female 1171.5
Sample D Female 1309.9
Septum
nTPM: 125.9
Samples: 4

Max nTPM: 162.7
Min nTPM: 92.2
Sample A Male 162.7
Sample B Male 92.2
Sample C Female 100.8
Sample D Female 147.9
Ventral forebrain
nTPM: 593.6
Samples: 4

Max nTPM: 689.1
Min nTPM: 556.6
Sample A Male 557.3
Sample B Male 556.6
Sample C Female 689.1
Sample D Female 571.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.5
77371857 Antisense, RP_070129_01_B10, Mouse strain C57BL/6J (56 days, male) 19.4
1735 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 13.7
1734 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 7.1
Pallidum
Expression energy: 6.4
1735 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 6.9
77371857 Antisense, RP_070129_01_B10, Mouse strain C57BL/6J (56 days, male) 5.9
1734 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 1.9

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