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  • BASP1
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: High
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: High
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: High
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:130.5 nTPM
HPA Brain:100.4 nTPM
GTEx:130.5 nTPM
FANTOM5:208.9 Scaled Tags Per Million
Pig:144.7 nTPM
Mouse:8.6 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045218Antibody HPA050333
Bergmann glia - cytoplasm/membrane Not detected-
Bergmann glia - nucleus Not detected-
GLUC cells - cytoplasm/membrane Not detected-
GLUC cells - nucleus Not detected-
Purkinje cells -Not detected
Purkinje cells - cytoplasm/membrane Not detected-
Purkinje cells - dendrites Not detected-
Purkinje cells - nucleus Not detected-
Cells in granular layer -Not detected
Cells in molecular layer -High
Granular cells - cytoplasm/membrane Not detected-
Granular cells - nucleus Not detected-
Molecular layer - neuropil High-
Molecular layer cells - cytoplasm/membrane Not detected-
Molecular layer cells - nucleus Not detected-
Processes in granular layer Not detected-
Processes in molecular layer Not detected-
Processes in white matter Not detected-
Synaptic glomeruli - capsule High-
Synaptic glomeruli - core Not detected-
White matter cells - cytoplasm/membrane High-
White matter cells - nucleus Not detected-





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.4
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 100.4
2101 Male, age 74, right hemisphere 162.9
1768 Female, age 72, unknown 143.6
1774 Male, age 80, left hemisphere 110.4
1769 Male, age 76, right hemisphere 106.7
2006 Male, age 61, right hemisphere 97.1
2055 Female, age 91, right hemisphere 95.0
1788 Male, age 55, unknown 53.3
2003 Female, age 85, right hemisphere 34.3
Cerebellar nuclei
nTPM: 56.1
2882 Male, age 76, left hemisphere 75.6
1966 Female, age 91, left hemisphere 66.4
2175 Male, age 61, right hemisphere 58.0
1879 Male, age 55, unknown 56.6
2783 Female, age 72, unknown 56.4
2318 Male, age 74, left hemisphere 55.7
2177 Female, age 85, both hemispheres 51.4
2005 Male, age 80, left hemisphere 50.4
1871 Male, age 74, unknown 34.1
Flocculonodular lobe
nTPM: 77.3
1771 Male, age 80, left hemisphere 107.7
1767 Male, age 76, left hemisphere 90.4
1792 Male, age 74, unknown 80.0
1765 Male, age 55, unknown 77.3
2176 Female, age 91, right hemisphere 77.3
2004 Male, age 61, right hemisphere 54.3
1835 Female, age 85, right hemisphere 54.0
Vermis
nTPM: 80.4
1751 Male, age 74, right hemisphere 184.1
1770 Male, age 76, left hemisphere 99.1
1778 Female, age 91, left hemisphere 89.2
1825 Male, age 74, unknown 76.8
1928 Female, age 72, unknown 75.0
2460 Male, age 61, both hemispheres 65.0
1988 Female, age 85, left hemisphere 61.1
1766 Male, age 55, unknown 40.8
2834 Male, age 80, left hemisphere 32.5

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 130.5
Samples: 215

Max nTPM: 227.5
Min nTPM: 57.6
Std nTPM: 28.1
Median nTPM: 131.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 227.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 208.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 198.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 190.6
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 190.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 182.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 181.2
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 180.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 180.2
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 179.6
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 178.3
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 178.1
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 173.1
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 172.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 172.0
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 171.2
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 169.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 169.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 168.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 168.3
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 165.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 165.3
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 164.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 163.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 162.8
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 162.2
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 161.2
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 160.9
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 158.3
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 157.5
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 156.6
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 156.5
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 156.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 155.6
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 155.0
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 153.6
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 153.6
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 153.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 153.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 152.9
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 152.8
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 152.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 152.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 152.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 152.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 152.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 151.5
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 150.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 150.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 149.8
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 149.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 149.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 149.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 149.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 149.4
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 149.3
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 148.7
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 148.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 148.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 148.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 148.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 148.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 147.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 147.7
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 147.4
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 147.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 147.3
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 147.3
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 147.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 146.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 145.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 145.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 145.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 144.1
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 144.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 143.6
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 143.2
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 142.8
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 142.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 142.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 142.2
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 141.9
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 140.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 140.8
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 140.8
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 140.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 140.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 139.9
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 138.9
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 138.4
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 138.3
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 137.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 137.7
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 137.4
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 137.0
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 136.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 136.6
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 136.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 136.2
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 136.2
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 135.7
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 134.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 133.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 133.1
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 132.8
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 132.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 131.6
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 131.1
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 130.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 130.1
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 129.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 129.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 129.1
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 128.5
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 128.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 128.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 127.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 127.7
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 127.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 127.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 126.5
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 126.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 126.1
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 125.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 125.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 123.7
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 123.2
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 123.0
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 122.9
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 122.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 122.3
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 122.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 121.5
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 121.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 120.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 120.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 118.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 117.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 117.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 117.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 116.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 115.8
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 115.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 115.5
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 115.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 114.8
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 114.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 114.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 113.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 113.4
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 113.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 113.3
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 112.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 112.2
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 111.9
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 111.3
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 111.0
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 110.4
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 110.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 110.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 109.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 109.1
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 109.0
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 108.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 107.8
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 107.4
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 107.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 106.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 106.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 106.6
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 105.8
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 105.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 105.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 105.3
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 104.7
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 104.7
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 104.5
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 104.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 104.0
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 102.1
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 101.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 100.9
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 100.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 100.5
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 100.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 100.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 99.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 97.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 97.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 97.5
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 96.8
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 96.7
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 94.9
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 94.6
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 94.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 93.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 92.3
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 91.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 90.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 89.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 88.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 86.6
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 85.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 83.9
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 83.7
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 83.4
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 81.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 80.3
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 79.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 76.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 76.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 75.1
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 75.0
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 72.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 57.6
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Brain - Cerebellum
Average nTPM: 99.8
Samples: 241

Max nTPM: 157.9
Min nTPM: 48.4
Std nTPM: 22.2
Median nTPM: 98.1
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 157.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 157.2
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 154.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 149.8
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 147.5
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 146.8
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 145.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 143.4
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 143.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 141.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 141.4
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 141.3
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 140.4
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 138.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 138.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 137.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 133.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 133.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 132.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 132.1
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 130.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 130.0
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 129.3
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 129.1
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 128.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 127.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 126.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 126.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 125.6
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 125.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 124.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 124.1
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 124.0
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 123.9
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 123.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 123.7
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 123.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 122.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 122.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 121.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 121.7
GTEX-14ABY-3026-SM-664NE 50-59 years, male 120.8
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 120.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 120.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 120.4
GTEX-11EI6-2926-SM-5985U 60-69 years, male 119.4
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 119.1
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 118.9
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 118.6
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 118.5
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 118.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 117.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 117.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 117.2
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 117.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 116.9
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 115.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 115.5
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 115.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 115.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 114.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 114.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 114.8
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 114.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 114.2
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 114.1
GTEX-12126-0926-SM-5FQTW 20-29 years, male 114.0
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 113.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 113.8
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 113.5
GTEX-WL46-2826-SM-3LK81 50-59 years, male 113.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 113.1
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 112.6
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 112.5
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 112.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 112.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 111.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 111.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 110.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 110.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 109.5
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 109.1
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 108.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 108.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 108.7
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 107.6
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 107.5
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 107.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 107.2
GTEX-11NUK-3026-SM-5986K 50-59 years, male 106.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 106.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 106.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 106.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 105.8
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 105.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 105.6
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 105.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 105.4
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 105.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 104.9
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 104.4
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 103.9
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 103.8
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 103.3
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 103.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 103.1
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 103.0
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 102.8
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 102.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 101.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 101.6
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 100.9
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 100.7
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 100.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 100.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 99.6
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 99.0
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 98.8
GTEX-17EVP-2926-SM-793BU 40-49 years, male 98.4
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 98.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 98.1
GTEX-1B933-3026-SM-731DB 50-59 years, female 98.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 98.0
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 97.0
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 96.9
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 96.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 96.8
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 96.8
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 96.6
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 96.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 96.3
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 95.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 95.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 95.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 94.8
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 94.5
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 94.4
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 94.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 93.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 93.9
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 93.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 93.4
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 93.3
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 92.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 92.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 92.5
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 92.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 92.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 91.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 91.4
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 91.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 91.1
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 90.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 90.3
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 89.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 89.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 89.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 89.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 89.7
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 89.4
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 89.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 89.0
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 88.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 88.6
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 88.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 88.1
GTEX-RU72-2926-SM-2TF66 50-59 years, female 87.9
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 87.5
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 87.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 87.1
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 86.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 86.7
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 85.8
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 85.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 85.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 85.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 85.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 85.2
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 85.1
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 84.8
GTEX-14PN4-3026-SM-664O4 50-59 years, male 84.2
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 84.0
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 83.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 83.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 82.4
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 81.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 81.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 80.9
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 80.7
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 80.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 80.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 80.5
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 80.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 80.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 79.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 79.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 79.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 78.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 77.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 77.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 76.9
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 76.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 76.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 75.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 75.8
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 75.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 75.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 75.5
GTEX-15G19-2826-SM-6M48K 60-69 years, male 75.3
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 75.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 73.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 73.6
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 73.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 72.3
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 72.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 71.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 70.9
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 70.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 68.9
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 68.8
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 68.2
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 68.1
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 68.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 67.7
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 67.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 67.3
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 67.0
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 66.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 65.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 65.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 64.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 63.2
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 61.7
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 61.5
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 59.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 59.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 58.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 58.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 55.2
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 51.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 48.4
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

208.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 208.9
FF:10166-103B4 76 years, female 229.1
FF:10083-102B2 22-68 years, mixed 188.8

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.7
Pig sample Sample description nTPM
Cerebellum
nTPM: 144.8
Samples: 4

Max nTPM: 154.6
Min nTPM: 131.6
Sample A Female 138.6
Sample B Female 154.6
Sample C Male 131.6
Sample D Male 154.2

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.6
Mouse sample Sample description nTPM
Cerebellum
nTPM: 8.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.0
Sample A Male 6.0
Sample B Male 8.6
Sample C Female 10.7
Sample D Female 9.0

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The Human Protein Atlas project is funded
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