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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:137.7 nTPM
HPA Brain:342.5 nTPM
GTEx:137.7 nTPM
FANTOM5:905.1 Scaled Tags Per Million
Pig:171.5 nTPM
Mouse:186.4 nTPM
Allen mouse:19.7 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA067773
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Not detected
Synapses Low

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA067773
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

342.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 271.5
2288 Male, age 75, left hemisphere 409.8
2289 Male, age 61, right hemisphere 362.4
2290 Female, age 72, unknown 287.5
1781 Male, age 74, unknown 272.7
1857 Female, age 85, left hemisphere 245.4
1854 Male, age 80, left hemisphere 223.5
2481 Female, age 94, left hemisphere 191.4
2846 Female, age 79, unknown 179.6
Globus pallidus, externus
nTPM: 75.8
2646 Male, age 61, right hemisphere 131.8
2567 Female, age 72, unknown 77.9
2772 Female, age 79, unknown 77.2
2395 Male, age 75, both hemispheres 50.4
1996 Male, age 80, right hemisphere 41.8
Globus pallidus, internus
nTPM: 56.3
2483 Female, age 94, right hemisphere 107.6
1818 Male, age 74, unknown 101.6
2566 Female, age 72, unknown 79.0
2037 Male, age 80, right hemisphere 50.5
2111 Female, age 85, right hemisphere 31.1
2778 Female, age 91, both hemispheres 16.2
2287 Male, age 75, right hemisphere 8.2
Nucleus accumbens
nTPM: 243.3
1856 Female, age 91, right hemisphere 339.9
2286 Male, age 75, left hemisphere 320.6
2824 Male, age 61, right hemisphere 298.7
1783 Male, age 74, unknown 276.9
1806 Female, age 85, left hemisphere 230.0
2698 Female, age 72, unknown 210.3
2391 Female, age 94, left hemisphere 139.3
2732 Male, age 80, right hemisphere 130.5
Nucleus basalis of Meynert
nTPM: 237.5
2484 Female, age 94, left hemisphere 323.5
2821 Male, age 75, both hemispheres 281.8
2393 Male, age 80, right hemisphere 190.7
2569 Male, age 61, both hemispheres 154.2
Nucleus of the diagonal band
nTPM: 342.5
2029 Male, age 61, right hemisphere 452.7
1812 Female, age 91, both hemispheres 366.7
2195 Female, age 85, both hemispheres 345.5
2775 Male, age 80, right hemisphere 335.2
1979 Male, age 74, unknown 212.4
Putamen
nTPM: 261.9
2647 Male, age 75, left hemisphere 390.3
1937 Female, age 91, right hemisphere 283.7
1838 Male, age 80, right hemisphere 275.6
1829 Male, age 74, unknown 253.8
2489 Female, age 72, unknown 253.4
2482 Female, age 94, left hemisphere 200.3
2466 Female, age 79, unknown 175.9
Septal nuclei
nTPM: 280.5
1960 Male, age 74, unknown 381.7
2629 Female, age 94, right hemisphere 363.2
2009 Female, age 91, both hemispheres 323.3
2031 Female, age 72, unknown 280.9
2059 Female, age 85, both hemispheres 259.1
2394 Male, age 61, left hemisphere 218.2
2199 Male, age 80, right hemisphere 136.7
Stria terminalis, bed nucleus
nTPM: 342.2
2486 Female, age 94, both hemispheres 404.2
1974 Female, age 91, both hemispheres 402.6
2201 Male, age 74, unknown 219.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 118.4
Samples: 246

Max nTPM: 259.8
Min nTPM: 14.1
Std nTPM: 52.3
Median nTPM: 120.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 259.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 241.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 240.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 232.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 220.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 218.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 216.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 215.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 212.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 212.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 211.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 210.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 203.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 201.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 198.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 198.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 194.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 193.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 193.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 191.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 190.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 189.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 189.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 189.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 189.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 185.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 184.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 184.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 182.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 182.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 181.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 181.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 180.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 178.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 177.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 176.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 176.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 173.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 172.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 171.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 170.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 170.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 169.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 168.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 168.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 167.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 166.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 165.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 165.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 164.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 164.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 164.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 163.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 163.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 162.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 162.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 161.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 161.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 160.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 160.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 159.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 158.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 156.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 156.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 154.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 153.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 152.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 151.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 150.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 150.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 150.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 148.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 148.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 147.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 147.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 146.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 146.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 145.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 145.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 144.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 143.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 143.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 143.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 143.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 143.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 142.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 142.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 142.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 142.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 141.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 141.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 139.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 139.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 138.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 135.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 135.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 134.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 133.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 133.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 132.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 132.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 131.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 130.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 129.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 129.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 128.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 127.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 127.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 125.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 125.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 125.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 125.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 125.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 124.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 122.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 122.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 122.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 122.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 122.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 121.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 121.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 120.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 120.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 119.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 119.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 119.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 119.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 118.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 118.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 117.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 115.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 114.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 113.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 112.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 111.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 110.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 110.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 109.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 109.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 106.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 104.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 104.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 103.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 103.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 102.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 101.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 100.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 100.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 99.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 99.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 98.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 98.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 98.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 97.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 95.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 94.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 94.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 93.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 93.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 92.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 92.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 92.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 91.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 91.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 91.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 90.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 89.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 89.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 89.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 89.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 88.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 88.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 87.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 86.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 85.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 84.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 81.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 80.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 80.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 79.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 78.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 76.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 74.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 74.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 74.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 73.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 72.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 69.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 69.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 69.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 67.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 66.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 65.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 65.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 63.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 62.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 61.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 59.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 58.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 58.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 58.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 57.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 57.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 56.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 53.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 53.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 51.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 48.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 48.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 48.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 47.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 45.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 44.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 42.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 39.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 39.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 38.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 35.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 34.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 27.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 27.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 26.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 21.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 19.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 19.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 17.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 137.7
Samples: 246

Max nTPM: 261.4
Min nTPM: 1.7
Std nTPM: 56.7
Median nTPM: 141.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 261.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 261.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 254.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 253.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 248.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 242.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 240.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 238.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 232.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 228.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 227.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 227.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 224.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 224.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 223.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 222.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 222.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 219.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 218.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 218.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 214.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 213.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 212.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 212.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 211.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 211.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 208.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 207.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 206.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 205.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 204.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 201.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 198.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 197.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 197.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 196.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 195.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 195.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 195.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 194.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 193.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 192.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 192.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 191.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 190.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 190.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 189.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 189.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 189.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 188.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 187.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 187.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 186.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 185.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 184.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 184.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 184.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 181.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 180.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 179.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 179.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 178.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 177.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 177.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 175.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 175.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 175.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 174.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 174.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 174.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 174.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 174.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 173.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 173.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 171.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 171.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 169.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 168.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 167.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 166.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 165.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 165.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 164.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 164.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 164.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 164.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 164.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 163.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 162.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 162.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 160.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 160.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 159.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 159.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 158.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 157.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 156.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 156.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 154.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 153.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 152.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 152.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 150.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 149.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 149.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 149.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 149.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 149.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 148.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 148.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 147.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 147.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 147.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 147.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 146.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 145.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 145.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 145.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 143.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 143.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 143.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 142.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 141.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 141.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 140.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 139.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 138.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 138.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 137.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 136.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 136.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 135.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 135.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 135.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 134.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 134.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 133.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 133.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 132.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 132.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 132.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 131.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 131.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 131.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 131.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 128.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 128.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 127.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 127.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 126.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 125.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 125.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 125.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 124.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 123.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 120.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 119.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 119.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 116.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 115.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 115.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 115.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 115.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 114.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 114.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 112.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 110.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 110.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 110.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 110.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 109.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 109.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 109.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 109.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 109.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 107.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 106.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 103.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 103.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 103.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 101.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 99.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 99.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 97.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 97.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 96.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 96.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 96.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 95.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 95.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 94.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 92.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 91.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 90.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 90.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 88.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 87.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 87.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 86.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 83.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 83.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 82.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 79.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 78.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 78.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 78.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 78.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 77.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 74.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 72.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 72.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 70.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 67.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 67.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 66.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 65.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 64.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 63.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 62.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 61.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 60.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 53.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 51.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 50.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 49.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 46.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 46.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 44.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 43.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 42.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 41.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 40.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 38.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 34.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 30.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 23.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 22.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 22.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 12.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 9.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 9.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.7
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Brain - Putamen (basal ganglia)
Average nTPM: 114.7
Samples: 205

Max nTPM: 248.8
Min nTPM: 5.1
Std nTPM: 52.3
Median nTPM: 120.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 248.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 211.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 211.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 201.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 201.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 200.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 198.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 197.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 195.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 194.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 191.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 188.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 185.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 183.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 181.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 181.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 180.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 179.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 179.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 179.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 178.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 178.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 177.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 176.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 175.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 174.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 173.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 173.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 173.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 172.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 171.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 171.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 171.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 170.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 170.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 169.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 168.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 167.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 167.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 165.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 165.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 165.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 164.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 164.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 164.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 163.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 162.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 162.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 161.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 161.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 160.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 159.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 158.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 157.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 156.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 155.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 155.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 155.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 154.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 152.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 152.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 151.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 149.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 148.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 148.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 148.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 147.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 147.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 147.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 143.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 143.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 143.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 142.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 142.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 139.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 137.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 137.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 136.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 136.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 134.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 132.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 131.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 130.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 129.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 129.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 129.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 128.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 128.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 127.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 127.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 126.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 125.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 125.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 124.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 124.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 123.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 122.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 122.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 121.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 121.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 121.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 120.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 120.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 119.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 119.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 119.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 118.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 118.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 117.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 117.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 116.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 116.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 115.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 115.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 114.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 114.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 111.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 108.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 107.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 107.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 105.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 105.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 104.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 104.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 103.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 102.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 101.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 100.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 99.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 98.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 95.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 94.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 94.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 86.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 86.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 85.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 85.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 85.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 84.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 84.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 83.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 83.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 82.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 81.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 81.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 80.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 77.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 77.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 75.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 74.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 74.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 74.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 73.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 72.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 71.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 71.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 70.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 69.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 66.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 63.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 63.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 63.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 62.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 61.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 61.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 60.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 58.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 57.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 56.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 55.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 53.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 52.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 52.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 51.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 50.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 47.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 45.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 45.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 44.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 42.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 42.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 41.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 41.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 40.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 39.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 38.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 35.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 35.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 33.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 32.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 30.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 24.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 22.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 18.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 18.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 11.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

905.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 581.7
FF:10164-103B2 76 years, female 581.7
Nucleus accumbens
Scaled Tags Per Million: 905.1
FF:10037-101F1 23-56 years, mixed 905.1
Putamen
Scaled Tags Per Million: 873.5
FF:10176-103C5 60 years, female 873.5
Globus pallidus
Scaled Tags Per Million: 242.4
FF:10175-103C4 60 years, female 400.2
FF:10161-103A8 76 years, female 84.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.5
Pig sample Sample description nTPM
Caudate
nTPM: 171.5
Samples: 4

Max nTPM: 208.6
Min nTPM: 125.9
Sample A Female 125.9
Sample B Female 188.4
Sample C Male 208.6
Sample D Male 163.0
Putamen
nTPM: 169.7
Samples: 4

Max nTPM: 230.1
Min nTPM: 76.8
Sample A Female 76.8
Sample B Female 169.7
Sample C Male 230.1
Sample D Male 202.1
Septum
nTPM: 114.2
Samples: 4

Max nTPM: 137.3
Min nTPM: 71.4
Sample A Female 133.3
Sample B Female 137.3
Sample C Male 114.8
Sample D Male 71.4
Ventral pallidum
nTPM: 136.2
Samples: 4

Max nTPM: 146.1
Min nTPM: 120.0
Sample A Female 146.1
Sample B Female 136.6
Sample C Male 141.9
Sample D Male 120.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 186.5
Samples: 4

Max nTPM: 216.5
Min nTPM: 155.5
Sample A Male 192.9
Sample B Male 216.5
Sample C Female 155.5
Sample D Female 180.9
Septum
nTPM: 137.8
Samples: 4

Max nTPM: 151.4
Min nTPM: 130.2
Sample A Male 151.4
Sample B Male 137.4
Sample C Female 132.1
Sample D Female 130.2
Ventral forebrain
nTPM: 150.1
Samples: 4

Max nTPM: 153.1
Min nTPM: 147.1
Sample A Male 149.2
Sample B Male 147.1
Sample C Female 150.9
Sample D Female 153.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.7
79632316 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 24.2
79556694 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 23.2
1585 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 15.2
1586 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 11.2
Pallidum
Expression energy: 14.5
79632316 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 18.1
79556694 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 17.1
1585 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 10.8
1586 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 8.3

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