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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
50.2
nTPM
HPA:
33.4
nTPM
GTEx:
50.2
nTPM
FANTOM5:
77.9
Scaled Tags Per Million
SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis
SMALL INTESTINE - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
33.4
Male, age 65
Small intestine sample 232 nTPM: 38.7
Cell types%
Glandular cells:
55
Smooth muscle cells:
5
Other cell types:
40
Male, age 39
Small intestine sample 233 nTPM: 37.4
Cell types%
Glandular cells:
40
Smooth muscle cells:
5
Other cell types:
55
Male, age 68
Small intestine sample 234 nTPM: 27.6
Cell types%
Glandular cells:
30
Smooth muscle cells:
15
Other cell types:
55
Male, age 85
Small intestine sample 235 nTPM: 29.9
SMALL INTESTINE - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
50.2
GTEx sample id
Sample description
nTPM
Small Intestine - Terminal Ileum Average nTPM: 50.2
Samples: 187
Max nTPM: 88.0
Min nTPM: 22.1
Std nTPM: 12.3
Median nTPM: 51.7
GTEX-1NSGN-2126-SM-DPRYN
50-59 years, male
88.0
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
77.2
GTEX-111YS-1426-SM-5GID8
60-69 years, male
75.4
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
73.7
GTEX-1MGNQ-2326-SM-EV7BG
40-49 years, male
73.5
GTEX-1QP2A-2426-SM-EXOJA
50-59 years, male
72.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
72.8
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
72.7
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
72.0
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
70.6
GTEX-YFCO-1326-SM-664NV
40-49 years, male
68.8
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
68.1
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
67.8
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
65.2
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
64.8
GTEX-1KXAM-2026-SM-DHXKI
60-69 years, male
64.3
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
64.1
GTEX-1LBAC-1526-SM-CXZKU
20-29 years, male
64.1
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
64.0
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
64.0
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
63.4
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
63.1
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
63.0
GTEX-1122O-1326-SM-5H11F
60-69 years, female
62.9
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
62.8
GTEX-1PIEJ-1526-SM-E6CP8
20-29 years, female
61.9
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
61.7
GTEX-14PKU-1626-SM-6871C
40-49 years, female
61.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
61.5
GTEX-183FY-1626-SM-793D8
20-29 years, male
61.3
GTEX-1L5NE-1826-SM-EV79T
50-59 years, male
61.3
GTEX-14PK6-1626-SM-6871I
70-79 years, female
61.1
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
61.1
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
60.7
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
60.6
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
60.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
60.4
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
60.2
GTEX-1PDJ9-1826-SM-E9U66
20-29 years, male
60.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
60.0
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
60.0
GTEX-ZLWG-1626-SM-DNZZ1
50-59 years, female
59.9
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
59.6
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
59.6
GTEX-1C475-1426-SM-793CH
40-49 years, female
59.3
GTEX-11TUW-1926-SM-5BC58
60-69 years, male
59.1
GTEX-ZDTT-1726-SM-5HL69
60-69 years, male
59.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
59.0
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
59.0
GTEX-1JK1U-1226-SM-CNNPN
60-69 years, male
59.0
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
57.9
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
57.9
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
57.9
GTEX-1JN76-1126-SM-C1YRL
20-29 years, female
57.9
GTEX-1J8Q3-2526-SM-CNNQ4
60-69 years, male
57.8
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
57.7
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
57.6
GTEX-ZTSS-0926-SM-59865
40-49 years, male
57.4
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
57.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
57.2
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
57.2
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
57.1
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
56.7
GTEX-1OJC3-1626-SM-E9U65
20-29 years, male
56.7
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
56.6
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
56.5
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
56.3
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
56.1
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
55.5
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
55.4
GTEX-1QP28-1726-SM-E6CRK
50-59 years, female
55.1
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
55.0
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
55.0
GTEX-14PN3-2026-SM-68729
60-69 years, female
54.1
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
54.1
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
53.8
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
53.8
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
53.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
53.5
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
53.4
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
53.3
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
53.2
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
53.0
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
52.9
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
52.7
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
52.7
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
52.6
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
52.4
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
52.4
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
52.2
GTEX-1IKOE-1926-SM-ARU7V
30-39 years, female
52.0
GTEX-1QPFJ-2626-SM-DPRZU
30-39 years, female
52.0
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
51.9
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
51.7
GTEX-13113-1226-SM-5EGHT
60-69 years, female
51.6
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
51.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
51.4
GTEX-1K9T9-2726-SM-D4P3E
50-59 years, female
50.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
50.6
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
50.6
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
50.2
GTEX-ZG7Y-1926-SM-DNZZ5
50-59 years, male
50.2
GTEX-1CB4F-1826-SM-7MGXI
60-69 years, male
50.1
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
49.8
GTEX-1R9K5-2026-SM-E6CPS
50-59 years, male
49.7
GTEX-1RAZQ-2226-SM-DPRZR
30-39 years, male
49.7
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
49.6
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
49.6
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
49.3
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
49.3
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
48.6
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
48.3
GTEX-1J8QM-1026-SM-C1YQA
60-69 years, female
48.2
GTEX-1R7EV-1226-SM-DTX82
40-49 years, male
48.0
GTEX-1H11D-2526-SM-9JGGU
40-49 years, male
47.8
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
46.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
46.9
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
46.9
GTEX-1R7EU-1326-SM-E6CQ6
60-69 years, male
46.9
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
46.7
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
46.6
GTEX-1HSMQ-2226-SM-C1YRD
50-59 years, male
46.4
GTEX-1MUQO-2426-SM-EAZ5A
60-69 years, male
46.1
GTEX-1R9PM-1626-SM-DPRY9
20-29 years, male
45.9
GTEX-15EU6-1826-SM-7PC1W
50-59 years, male
45.7
GTEX-1F75I-2526-SM-9WPOZ
40-49 years, male
45.6
GTEX-1RAZA-1826-SM-DTXA2
20-29 years, male
45.6
GTEX-13O61-1326-SM-5KM31
60-69 years, male
45.2
GTEX-144GM-1026-SM-79OKU
20-29 years, male
45.0
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
44.7
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
43.9
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
43.7
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
43.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
43.2
GTEX-1H1DE-1426-SM-9JGHV
20-29 years, male
42.9
GTEX-1CAMS-2426-SM-7DHMV
40-49 years, female
42.4
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
42.3
GTEX-1LGOU-1426-SM-D3L8N
20-29 years, female
42.2
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
42.0
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
41.3
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
40.0
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
39.6
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
39.6
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
39.6
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
39.6
GTEX-1QW4Y-1226-SM-EWRMY
30-39 years, male
39.5
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
39.3
GTEX-1JMQK-2426-SM-CXZJU
60-69 years, male
39.3
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
39.0
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
38.7
GTEX-13111-1426-SM-5DUW3
50-59 years, male
38.3
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
38.2
GTEX-1192X-2526-SM-59868
50-59 years, male
37.6
GTEX-1OKEX-1126-SM-DTXEB
60-69 years, male
37.2
GTEX-117YX-0326-SM-5GICL
50-59 years, male
37.1
GTEX-1RAZR-1826-SM-E6CRE
40-49 years, male
37.0
GTEX-1S82Z-1826-SM-E9TIK
30-39 years, female
36.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
36.8
GTEX-1S5ZA-1326-SM-EV7BB
20-29 years, male
35.9
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
35.4
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
35.3
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
35.3
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
35.3
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
34.4
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
34.0
GTEX-1QCLZ-2126-SM-EWRNC
60-69 years, female
33.8
GTEX-1R9JW-1926-SM-EVR4J
30-39 years, female
33.4
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
33.2
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
33.2
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
30.7
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
30.7
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
30.7
GTEX-1JJE9-2226-SM-CXZJM
70-79 years, male
30.6
GTEX-1I1GT-1826-SM-ARZLW
60-69 years, female
30.4
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
30.1
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
30.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
29.6
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
28.5
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
28.2
GTEX-1LH75-1926-SM-DIPGD
50-59 years, female
27.2
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
26.6
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
26.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
26.5
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
26.4
GTEX-1R9K4-2326-SM-E6CRB
60-69 years, male
23.7
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
23.6
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
22.1
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
