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CTXN1
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  • CTXN1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:572.9 nTPM
FANTOM5:832.7 Scaled Tags Per Million
Pig:436.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA016669
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

572.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 572.9
Samples: 246

Max nTPM: 1479.7
Min nTPM: 8.2
Std nTPM: 227.2
Median nTPM: 575.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1479.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1374.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1218.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1132.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1121.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1119.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1104.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1087.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1059.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1042.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1028.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1007.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 981.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 974.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 949.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 942.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 923.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 922.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 920.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 906.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 896.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 882.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 879.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 851.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 846.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 837.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 836.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 835.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 834.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 834.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 823.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 811.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 808.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 805.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 799.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 797.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 793.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 779.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 777.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 768.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 764.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 754.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 751.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 747.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 746.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 744.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 732.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 732.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 731.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 730.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 726.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 721.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 719.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 711.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 708.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 697.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 695.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 691.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 690.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 689.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 688.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 686.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 681.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 680.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 674.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 670.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 670.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 668.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 668.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 666.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 666.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 665.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 664.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 662.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 657.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 655.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 654.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 653.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 651.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 651.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 650.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 648.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 642.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 642.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 639.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 636.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 636.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 635.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 634.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 633.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 628.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 628.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 627.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 625.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 623.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 623.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 623.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 621.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 614.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 609.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 609.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 609.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 606.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 606.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 605.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 605.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 603.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 601.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 600.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 599.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 597.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 597.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 595.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 591.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 590.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 586.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 584.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 583.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 581.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 580.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 580.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 579.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 576.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 574.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 571.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 560.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 556.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 553.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 553.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 551.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 549.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 546.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 545.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 536.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 535.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 534.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 532.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 531.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 528.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 525.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 523.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 521.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 520.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 519.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 516.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 512.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 506.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 505.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 498.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 497.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 496.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 496.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 494.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 494.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 493.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 490.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 489.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 487.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 486.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 485.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 483.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 478.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 477.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 472.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 470.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 459.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 458.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 455.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 453.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 452.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 451.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 447.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 446.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 444.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 437.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 437.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 432.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 430.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 429.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 425.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 424.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 420.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 418.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 418.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 417.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 416.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 416.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 408.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 407.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 407.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 407.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 406.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 405.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 404.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 399.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 395.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 391.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 387.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 374.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 370.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 366.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 364.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 363.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 362.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 362.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 360.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 354.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 354.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 341.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 338.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 337.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 328.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 325.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 324.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 322.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 317.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 315.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 315.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 310.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 300.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 298.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 296.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 292.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 285.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 284.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 283.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 279.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 264.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 262.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 248.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 244.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 240.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 238.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 225.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 223.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 215.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 206.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 205.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 190.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 188.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 185.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 183.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 173.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 138.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 120.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 8.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

832.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 832.7
FF:10164-103B2 76 years, female 832.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

436.0
Pig sample Sample description nTPM
Caudate
nTPM: 436.0
Samples: 4

Max nTPM: 521.1
Min nTPM: 342.2
Sample A Female 362.6
Sample B Female 518.0
Sample C Male 521.1
Sample D Male 342.2

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