HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:839.5 nTPM
HPA Brain:730.9 nTPM
GTEx:839.5 nTPM
FANTOM5:698.3 Scaled Tags Per Million
Pig:1038.5 nTPM
Mouse:2204.5 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 730.9
Sample id Sample description nTPM
Hippocampus
nTPM: 621.0
1898 Male, age 80, left hemisphere 773.5
2529 Female, age 94, left hemisphere 637.2
2621 Female, age 67, right hemisphere 615.5
2148 Female, age 91, left hemisphere 580.6
1855 Male, age 76, left hemisphere 566.1
1911 Female, age 85, right hemisphere 553.3
Dentate gyrus
nTPM: 610.2
2530 Female, age 94, left hemisphere 842.4
1927 Female, age 91, both hemispheres 677.4
2010 Male, age 76, both hemispheres 608.9
2528 Male, age 74, both hemispheres 566.3
2246 Female, age 85, both hemispheres 513.2
2531 Female, age 67, both hemispheres 452.9
Entorhinal gyrus
nTPM: 519.7
2764 Male, age 80, right hemisphere 600.5
1787 Male, age 76, left hemisphere 546.4
1938 Female, age 85, left hemisphere 544.8
2117 Female, age 91, right hemisphere 514.5
2613 Female, age 94, left hemisphere 470.5
2686 Male, age 75, right hemisphere 441.7
Hippocampus, CA1
nTPM: 730.9
2749 Male, age 80, left hemisphere 1426.7
1873 Female, age 85, both hemispheres 651.9
2527 Male, age 74, both hemispheres 646.6
2045 Male, age 76, both hemispheres 482.9
2082 Female, age 91, right hemisphere 446.2
Hippocampus, CA2
nTPM: 654.0
1963 Male, age 80, left hemisphere 1073.6
2249 Male, age 74, both hemispheres 723.3
1892 Male, age 76, both hemispheres 631.1
2437 Female, age 94, left hemisphere 582.0
2113 Female, age 91, right hemisphere 483.3
1940 Female, age 85, left hemisphere 430.7
Hippocampus, CA3
nTPM: 624.0
2137 Male, age 80, left hemisphere 968.7
2436 Male, age 74, both hemispheres 720.6
1867 Male, age 76, both hemispheres 583.8
2861 Female, age 67, both hemispheres 522.7
1891 Female, age 85, both hemispheres 497.9
2620 Female, age 94, left hemisphere 450.5
Parahippocampal cortex
nTPM: 478.2
2245 Female, age 91, both hemispheres 598.4
1850 Male, age 80, both hemispheres 530.7
2250 Female, age 67, right hemisphere 527.5
1990 Female, age 91, right hemisphere 520.3
2532 Female, age 72, left hemisphere 512.7
1933 Female, age 85, both hemispheres 507.3
2018 Male, age 76, both hemispheres 488.1
2692 Male, age 74, both hemispheres 390.0
2622 Female, age 67, right hemisphere 369.0
2693 Female, age 94, both hemispheres 338.0
Perirhinal gyrus
nTPM: 514.5
1847 Female, age 91, left hemisphere 604.6
1794 Male, age 80, right hemisphere 558.3
2521 Female, age 94, right hemisphere 532.6
1841 Female, age 85, right hemisphere 473.9
2848 Male, age 76, right hemisphere 403.0
Subiculum
nTPM: 540.7
1901 Male, age 80, both hemispheres 665.0
1977 Female, age 85, both hemispheres 569.7
2438 Female, age 94, left hemisphere 520.2
2042 Male, age 76, both hemispheres 516.6
2619 Male, age 74, both hemispheres 508.4
2729 Female, age 91, right hemisphere 464.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 839.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 839.5
Samples: 197

Max nTPM: 2066.9
Min nTPM: 216.8
Std nTPM: 291.5
Median nTPM: 785.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2066.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2006.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1865.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1610.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1608.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1605.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 1500.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 1474.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 1461.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1409.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 1379.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 698.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 698.3
FF:10169-103B7 60 years, female 930.5
FF:10153-102I9 76 years, female 466.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1038.5
Pig sample Sample description nTPM
Subiculum
nTPM: 691.9
Samples: 4

Max nTPM: 1018.5
Min nTPM: 509.4
Sample A Female 1018.5
Sample B Female 626.5
Sample C Male 509.4
Sample D Male 613.3
Dorsal hippocampus
nTPM: 1038.5
Samples: 4

Max nTPM: 1553.2
Min nTPM: 841.3
Sample A Female 1553.2
Sample B Female 908.0
Sample C Male 851.6
Sample D Male 841.3
Entorhinal cortex
nTPM: 845.9
Samples: 4

Max nTPM: 920.2
Min nTPM: 673.1
Sample A Female 879.2
Sample B Female 911.1
Sample C Male 920.2
Sample D Male 673.1
Ventral hippocampus
nTPM: 785.0
Samples: 4

Max nTPM: 960.5
Min nTPM: 534.0
Sample A Female 868.4
Sample B Female 534.0
Sample C Male 777.0
Sample D Male 960.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2204.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1649.0
Samples: 4

Max nTPM: 1803.5
Min nTPM: 1487.5
Sample A Male 1547.7
Sample B Male 1487.5
Sample C Female 1803.5
Sample D Female 1757.1
Hippocampal formation
nTPM: 2204.5
Samples: 4

Max nTPM: 2483.6
Min nTPM: 2031.4
Sample A Male 2251.6
Sample B Male 2031.4
Sample C Female 2483.6
Sample D Female 2051.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
69873540 Antisense, RP_050512_01_E03, Mouse strain C57BL/6J (56 days, male) 14.4

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