PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:567.9 nTPM
FANTOM5:555.4 Scaled Tags Per Million
Pig:819.7 nTPM
Mouse:883.5 nTPM
Allen mouse:6.1 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 567.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 439.6
2301 Female, age 85, both hemispheres 461.2
2188 Female, age 91, both hemispheres 454.5
2090 Male, age 80, both hemispheres 437.2
1984 Male, age 76, both hemispheres 405.4
Area postrema
nTPM: 434.5
2799 Male, age 61, both hemispheres 513.5
2306 Male, age 80, both hemispheres 398.9
2054 Male, age 76, both hemispheres 391.0
Dorsal cochlear nucleus
nTPM: 490.8
2802 Male, age 74, right hemisphere 557.9
2187 Female, age 91, both hemispheres 507.9
2058 Male, age 76, both hemispheres 485.6
2370 Male, age 61, both hemispheres 479.9
2378 Male, age 80, both hemispheres 422.6
Dorsal medullary reticular nucleus
nTPM: 470.1
2040 Female, age 85, both hemispheres 510.1
2373 Male, age 61, both hemispheres 458.3
2088 Male, age 76, both hemispheres 441.9
Dorsal motor vagal complex
nTPM: 461.9
2133 Female, age 91, both hemispheres 554.5
2797 Male, age 61, both hemispheres 528.4
2844 Male, age 55, unknown 525.4
2000 Male, age 74, unknown 506.2
2643 Male, age 74, both hemispheres 481.2
2813 Female, age 72, unknown 403.8
2185 Male, age 76, both hemispheres 402.3
2807 Female, age 85, both hemispheres 293.6
Dorsal tegmental nucleus
nTPM: 475.5
2083 Male, age 80, both hemispheres 555.6
2326 Male, age 74, both hemispheres 511.0
2358 Male, age 61, both hemispheres 425.9
1936 Male, age 76, left hemisphere 409.5
Dorsolateral tegmental area
nTPM: 477.2
2751 Female, age 85, both hemispheres 609.7
2654 Male, age 80, both hemispheres 523.4
2360 Male, age 74, both hemispheres 434.5
2337 Male, age 61, both hemispheres 424.5
2141 Male, age 76, both hemispheres 394.0
Gigantocellular reticular nuclei, medullary
nTPM: 442.0
2314 Male, age 61, both hemispheres 517.7
1876 Female, age 85, both hemispheres 486.7
2387 Female, age 91, both hemispheres 468.3
2022 Male, age 76, right hemisphere 410.4
2310 Male, age 80, both hemispheres 394.6
2462 Male, age 74, both hemispheres 374.3
Gigantocellular reticular nuclei, pars
nTPM: 402.8
2084 Female, age 85, both hemispheres 518.8
2168 Male, age 76, both hemispheres 440.4
2336 Male, age 61, both hemispheres 422.8
2706 Male, age 80, both hemispheres 317.8
2330 Male, age 80, both hemispheres 314.4
Inferior olive
nTPM: 532.6
2085 Female, age 85, both hemispheres 628.3
2563 Male, age 74, both hemispheres 605.6
2178 Male, age 61, both hemispheres 530.7
2628 Female, age 91, both hemispheres 450.3
2379 Male, age 80, both hemispheres 448.2
Kolliker-Fuse nucleus
nTPM: 468.6
2315 Male, age 76, right hemisphere 505.1
2163 Male, age 80, both hemispheres 488.7
2793 Female, age 91, left hemisphere 412.2
Lateral lemniscal nuclei
nTPM: 397.8
2169 Male, age 76, both hemispheres 442.5
2746 Female, age 85, left hemisphere 408.3
2320 Female, age 91, left hemisphere 398.6
2453 Male, age 74, right hemisphere 374.1
2036 Male, age 80, both hemispheres 365.7
Lateral medullary reticular nucleus
nTPM: 486.8
2190 Female, age 85, both hemispheres 529.1
2305 Male, age 74, both hemispheres 507.5
2804 Female, age 91, both hemispheres 483.7
2852 Male, age 80, both hemispheres 472.2
2044 Male, age 76, both hemispheres 469.3
2374 Male, age 61, both hemispheres 458.9
Lateral parabrachial nucleus
nTPM: 447.6
2139 Female, age 85, right hemisphere 485.9
2792 Male, age 76, both hemispheres 471.2
2013 Male, age 80, both hemispheres 423.7
2790 Male, age 61, both hemispheres 409.7
Lateral vestibular nucleus
nTPM: 472.5
2184 Male, age 76, both hemispheres 482.4
2311 Male, age 80, both hemispheres 462.7
Locus coeruleus
nTPM: 527.2
2123 Female, age 91, both hemispheres 599.5
2317 Female, age 72, unknown 562.7
2014 Male, age 55, unknown 543.9
2720 Male, age 74, both hemispheres 536.1
2162 Male, age 80, both hemispheres 505.4
1980 Male, age 76, both hemispheres 502.6
2788 Male, age 74, unknown 440.5
Medial olivary nucleus
nTPM: 457.5
2138 Female, age 91, both hemispheres 547.0
1962 Male, age 76, both hemispheres 497.9
1943 Male, age 61, both hemispheres 418.9
2851 Male, age 80, both hemispheres 366.0
Medial parabrachial nucleus
nTPM: 505.6
2170 Female, age 91, both hemispheres 633.9
2463 Female, age 85, right hemisphere 612.3
2156 Male, age 61, both hemispheres 465.4
2786 Male, age 76, both hemispheres 426.7
2854 Male, age 80, both hemispheres 389.7
Medial periolivary nuclei
nTPM: 420.0
2063 Male, age 76, both hemispheres 523.0
2171 Female, age 85, both hemispheres 431.7
2791 Male, age 74, right hemisphere 398.4
2081 Male, age 80, both hemispheres 375.8
2458 Female, age 91, both hemispheres 371.1
Medial vestibular nucleus
nTPM: 483.4
2801 Male, age 74, both hemispheres 497.1
2093 Male, age 80, both hemispheres 492.8
2134 Male, age 76, both hemispheres 486.5
2743 Female, age 85, both hemispheres 485.0
2803 Female, age 91, both hemispheres 483.1
2624 Male, age 61, both hemispheres 455.6
Motor facial nucleus
nTPM: 420.7
2062 Male, age 76, both hemispheres 557.9
2126 Male, age 61, both hemispheres 474.8
2365 Male, age 74, right hemisphere 408.3
2795 Female, age 91, both hemispheres 387.7
2697 Female, age 85, both hemispheres 375.0
2327 Male, age 80, both hemispheres 320.7
Motor hypoglossal nucleus
nTPM: 470.4
2125 Female, age 91, both hemispheres 575.0
2132 Female, age 85, both hemispheres 529.4
2182 Male, age 80, both hemispheres 451.5
2277 Male, age 76, both hemispheres 422.9
2461 Male, age 61, both hemispheres 373.1
Motor trigeminal nucleus
nTPM: 416.4
2309 Male, age 76, both hemispheres 450.4
2335 Male, age 61, both hemispheres 434.2
2560 Male, age 74, both hemispheres 429.2
2079 Male, age 80, both hemispheres 393.0
2321 Female, age 91, both hemispheres 375.4
Nuclei of the trapezoid body
nTPM: 442.4
1983 Male, age 76, both hemispheres 564.8
2159 Male, age 61, both hemispheres 465.6
2735 Female, age 85, both hemispheres 408.8
2166 Male, age 80, both hemispheres 396.5
2368 Female, age 91, both hemispheres 376.2
Nucleus ambiguus
nTPM: 567.9
2071 Male, age 76, both hemispheres 577.5
2096 Female, age 85, both hemispheres 558.4
Nucleus cuneatus
nTPM: 419.3
2564 Male, age 74, both hemispheres 505.8
2562 Male, age 61, both hemispheres 435.0
2131 Male, age 76, both hemispheres 422.2
2380 Male, age 80, both hemispheres 416.1
2376 Male, age 61, both hemispheres 412.9
2100 Male, age 76, both hemispheres 406.4
2805 Female, age 91, both hemispheres 405.4
2381 Male, age 80, both hemispheres 387.3
2808 Female, age 85, both hemispheres 382.5
Nucleus gracilis
nTPM: 402.2
2627 Male, age 74, both hemispheres 457.0
2382 Male, age 80, both hemispheres 384.5
2299 Female, age 85, both hemispheres 365.1
Nucleus raphe magnus
nTPM: 402.2
2160 Male, age 61, both hemispheres 449.4
2455 Male, age 74, both hemispheres 433.2
2459 Female, age 91, both hemispheres 391.5
2051 Male, age 76, both hemispheres 389.3
2328 Male, age 80, both hemispheres 375.3
2172 Female, age 85, both hemispheres 374.4
Nucleus raphe obscurus
nTPM: 505.5
2845 Female, age 85, midline 571.4
2142 Male, age 76, midline 486.6
2800 Male, age 61, midline 458.6
Nucleus raphe pallidus
nTPM: 458.6
2183 Male, age 80, midline 487.7
1924 Male, age 61, midline 451.9
2145 Male, age 76, midline 436.2
Nucleus tractus solitarii
nTPM: 372.3
2656 Male, age 76, both hemispheres 433.5
2144 Female, age 91, right hemisphere 382.1
2191 Female, age 85, both hemispheres 346.0
2307 Male, age 80, both hemispheres 327.7
Paramedian reticular nucleus
nTPM: 453.0
2057 Male, age 80, both hemispheres 551.3
2313 Male, age 61, both hemispheres 455.6
2050 Female, age 85, both hemispheres 454.9
2052 Male, age 76, both hemispheres 350.0
Parvicellular reticular nuclei
nTPM: 435.7
2119 Male, age 80, both hemispheres 483.8
2095 Male, age 76, both hemispheres 480.8
2558 Male, age 74, both hemispheres 342.4
Parvicellular reticular nuclei, medullary
nTPM: 483.7
2091 Female, age 85, both hemispheres 511.7
2189 Female, age 91, both hemispheres 497.3
2181 Male, age 80, left hemisphere 442.3
Pedunculopontine tegmental nucleus
nTPM: 481.9
2334 Male, age 80, both hemispheres 531.4
1921 Female, age 85, both hemispheres 517.9
2338 Male, age 61, both hemispheres 396.5
Peritrigeminal nucleus
nTPM: 525.8
2067 Female, age 85, both hemispheres 584.7
2136 Male, age 76, both hemispheres 546.4
2179 Male, age 61, both hemispheres 446.2
Pontine nuclei
nTPM: 472.3
1863 Male, age 55, unknown 549.0
2109 Female, age 72, unknown 527.1
2454 Male, age 74, left hemisphere 501.2
1968 Male, age 76, left hemisphere 493.8
2319 Female, age 91, both hemispheres 455.6
2787 Female, age 85, both hemispheres 436.6
2727 Male, age 61, right hemisphere 433.7
2115 Male, age 80, left hemisphere 381.4
Pontine raphe nucleus
nTPM: 475.0
2122 Female, age 85, midline 493.0
2853 Male, age 76, midline 457.0
Posteroventral cochlear nucleus
nTPM: 470.5
2371 Male, age 61, both hemispheres 501.9
2752 Female, age 85, both hemispheres 501.1
2135 Female, age 91, both hemispheres 468.1
2070 Male, age 76, both hemispheres 463.5
2341 Male, age 80, both hemispheres 418.1
Prepositus hypoglossal nucleus
nTPM: 473.5
2855 Female, age 85, right hemisphere 523.5
2086 Male, age 80, both hemispheres 423.6
Principal sensory trigeminal nucleus
nTPM: 419.4
2158 Male, age 61, both hemispheres 482.7
2324 Male, age 76, both hemispheres 448.9
2367 Female, age 91, left hemisphere 391.4
2008 Male, age 80, left hemisphere 354.8
Reticular pontine nucleus, caudal
nTPM: 439.9
2092 Male, age 76, both hemispheres 512.0
2559 Male, age 74, both hemispheres 494.4
2457 Female, age 91, both hemispheres 400.6
2332 Male, age 80, right hemisphere 352.8
Reticular pontine nucleus, oral
nTPM: 475.7
1939 Male, age 80, both hemispheres 543.9
2167 Male, age 76, both hemispheres 515.9
2012 Female, age 85, both hemispheres 466.7
2366 Female, age 91, both hemispheres 429.8
2361 Male, age 74, both hemispheres 422.0
Reticulotegmental nucleus
nTPM: 469.0
2452 Male, age 74, both hemispheres 521.9
2322 Female, age 91, both hemispheres 471.5
2325 Male, age 76, both hemispheres 464.8
2333 Male, age 80, both hemispheres 418.0
Spinal trigeminal nucleus, caudal
nTPM: 443.5
2390 Female, age 91, both hemispheres 482.2
2447 Male, age 76, both hemispheres 474.3
2308 Male, age 80, both hemispheres 442.8
2642 Male, age 74, both hemispheres 413.3
2312 Male, age 61, both hemispheres 404.8
Spinal trigeminal nucleus, interpolar
nTPM: 476.2
2066 Male, age 76, right hemisphere 590.2
2625 Male, age 61, both hemispheres 516.0
2033 Male, age 80, both hemispheres 445.1
2386 Female, age 85, both hemispheres 427.2
2389 Female, age 91, both hemispheres 402.7
Spinal trigeminal nucleus, oral
nTPM: 443.3
2164 Male, age 80, both hemispheres 448.0
2737 Female, age 85, both hemispheres 444.0
1978 Male, age 76, both hemispheres 438.0
Spinal vestibular nucleus
nTPM: 498.8
2384 Male, age 74, both hemispheres 537.7
2748 Male, age 76, both hemispheres 525.4
2806 Female, age 85, both hemispheres 514.9
2186 Female, age 91, both hemispheres 507.3
2780 Male, age 80, both hemispheres 506.3
2796 Male, age 61, both hemispheres 401.2
Subcoeruleus area
nTPM: 485.7
2451 Male, age 74, both hemispheres 573.6
2369 Female, age 85, left hemisphere 563.7
2323 Female, age 91, left hemisphere 459.6
1958 Male, age 80, both hemispheres 420.1
2089 Male, age 76, left hemisphere 411.7
Superior olive
nTPM: 401.3
2020 Male, age 76, both hemispheres 443.0
2364 Male, age 74, right hemisphere 432.0
1875 Female, age 85, both hemispheres 406.6
2329 Male, age 80, right hemisphere 374.5
2561 Female, age 91, both hemispheres 350.5
Superior vestibular nucleus
nTPM: 487.0
2061 Male, age 76, both hemispheres 495.5
2015 Male, age 80, both hemispheres 486.5
2383 Male, age 74, both hemispheres 479.0
Ventral medullary reticular nucleus
nTPM: 506.3
2372 Male, age 61, both hemispheres 536.1
2060 Male, age 76, both hemispheres 476.5
Ventral periolivary nuclei
nTPM: 395.3
2023 Male, age 76, both hemispheres 459.6
2165 Male, age 80, both hemispheres 417.0
2130 Female, age 85, both hemispheres 398.7
2794 Female, age 91, left hemisphere 305.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 504.5
1986 Male, age 76, both hemispheres 533.8
2302 Female, age 91, both hemispheres 525.7
2741 Female, age 85, both hemispheres 514.0
2180 Male, age 61, both hemispheres 483.5
2118 Male, age 80, both hemispheres 465.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 418.9
2359 Male, age 61, both hemispheres 469.6
2456 Female, age 91, both hemispheres 429.2
1959 Male, age 76, both hemispheres 420.3
2449 Male, age 74, both hemispheres 408.5
2840 Female, age 85, both hemispheres 398.2
2161 Male, age 80, both hemispheres 387.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 555.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 528.9
FF:10165-103B3 76 years, female 580.6
FF:10182-103D2 60 years, female 477.2
Medulla oblongata
Scaled Tags Per Million: 555.4
FF:10174-103C3 60 years, female 906.6
FF:10155-103A2 76 years, female 427.2
FF:10038-101F2 18-64 years, mixed 332.3
Pons
Scaled Tags Per Million: 346.8
FF:10033-101E6 18-54 years, mixed 346.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 819.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 612.8
Samples: 4

Max nTPM: 704.8
Min nTPM: 532.4
Sample A Female 532.4
Sample B Female 544.3
Sample C Male 669.7
Sample D Male 704.8
Pons
nTPM: 819.7
Samples: 4

Max nTPM: 1093.0
Min nTPM: 499.3
Sample A Female 1093.0
Sample B Female 499.3
Sample C Male 761.6
Sample D Male 924.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 883.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 883.5
Samples: 4

Max nTPM: 964.2
Min nTPM: 779.9
Sample A Male 902.1
Sample B Male 779.9
Sample C Female 964.2
Sample D Female 887.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.8
69873540 Antisense, RP_050512_01_E03, Mouse strain C57BL/6J (56 days, male) 5.8
Pons
Expression energy: 6.1
69873540 Antisense, RP_050512_01_E03, Mouse strain C57BL/6J (56 days, male) 6.1

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