HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:100.7 nTPM
HPA Brain:358.6 nTPM
GTEx:100.7 nTPM
FANTOM5:377.9 Scaled Tags Per Million
Pig:97.2 nTPM
Mouse:252.5 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 358.6
Sample id Sample description nTPM
Hippocampus
nTPM: 345.0
2621 Female, age 67, right hemisphere 550.6
1855 Male, age 76, left hemisphere 413.9
1898 Male, age 80, left hemisphere 394.5
2148 Female, age 91, left hemisphere 286.9
1911 Female, age 85, right hemisphere 221.1
2529 Female, age 94, left hemisphere 202.9
Dentate gyrus
nTPM: 358.6
2530 Female, age 94, left hemisphere 599.1
2010 Male, age 76, both hemispheres 432.8
1927 Female, age 91, both hemispheres 349.7
2246 Female, age 85, both hemispheres 295.3
2528 Male, age 74, both hemispheres 252.9
2531 Female, age 67, both hemispheres 222.0
Entorhinal gyrus
nTPM: 231.3
2613 Female, age 94, left hemisphere 333.5
2764 Male, age 80, right hemisphere 252.2
1938 Female, age 85, left hemisphere 233.6
1787 Male, age 76, left hemisphere 216.2
2686 Male, age 75, right hemisphere 212.4
2117 Female, age 91, right hemisphere 139.7
Hippocampus, CA1
nTPM: 348.8
2749 Male, age 80, left hemisphere 592.1
1873 Female, age 85, both hemispheres 459.5
2527 Male, age 74, both hemispheres 303.0
2045 Male, age 76, both hemispheres 231.1
2082 Female, age 91, right hemisphere 158.2
Hippocampus, CA2
nTPM: 322.0
1963 Male, age 80, left hemisphere 534.2
1892 Male, age 76, both hemispheres 448.7
2437 Female, age 94, left hemisphere 381.3
2249 Male, age 74, both hemispheres 234.0
2113 Female, age 91, right hemisphere 168.7
1940 Female, age 85, left hemisphere 165.2
Hippocampus, CA3
nTPM: 278.0
2861 Female, age 67, both hemispheres 455.6
2137 Male, age 80, left hemisphere 291.4
1867 Male, age 76, both hemispheres 247.3
2436 Male, age 74, both hemispheres 243.4
2620 Female, age 94, left hemisphere 235.4
1891 Female, age 85, both hemispheres 194.7
Parahippocampal cortex
nTPM: 242.5
2622 Female, age 67, right hemisphere 372.8
2245 Female, age 91, both hemispheres 319.7
2532 Female, age 72, left hemisphere 248.1
1850 Male, age 80, both hemispheres 234.7
2250 Female, age 67, right hemisphere 233.9
2692 Male, age 74, both hemispheres 230.6
1933 Female, age 85, both hemispheres 220.5
1990 Female, age 91, right hemisphere 203.2
2693 Female, age 94, both hemispheres 202.8
2018 Male, age 76, both hemispheres 159.0
Perirhinal gyrus
nTPM: 229.1
1847 Female, age 91, left hemisphere 263.2
1794 Male, age 80, right hemisphere 243.3
1841 Female, age 85, right hemisphere 230.3
2521 Female, age 94, right hemisphere 224.2
2848 Male, age 76, right hemisphere 184.5
Subiculum
nTPM: 212.9
2438 Female, age 94, left hemisphere 327.6
2619 Male, age 74, both hemispheres 213.6
1901 Male, age 80, both hemispheres 206.9
1977 Female, age 85, both hemispheres 185.2
2042 Male, age 76, both hemispheres 178.3
2729 Female, age 91, right hemisphere 165.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 100.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.7
Samples: 197

Max nTPM: 344.6
Min nTPM: 5.1
Std nTPM: 63.5
Median nTPM: 82.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 344.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 329.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 301.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 288.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 288.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 273.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 253.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 253.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 244.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 241.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 238.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 377.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 377.9
FF:10169-103B7 60 years, female 554.6
FF:10153-102I9 76 years, female 201.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 97.2
Pig sample Sample description nTPM
Subiculum
nTPM: 69.4
Samples: 4

Max nTPM: 93.8
Min nTPM: 56.5
Sample A Female 93.8
Sample B Female 62.7
Sample C Male 56.5
Sample D Male 64.7
Dorsal hippocampus
nTPM: 82.5
Samples: 4

Max nTPM: 116.9
Min nTPM: 52.8
Sample A Female 116.9
Sample B Female 96.8
Sample C Male 63.3
Sample D Male 52.8
Entorhinal cortex
nTPM: 97.3
Samples: 4

Max nTPM: 104.1
Min nTPM: 88.9
Sample A Female 104.1
Sample B Female 102.0
Sample C Male 94.0
Sample D Male 88.9
Ventral hippocampus
nTPM: 79.9
Samples: 4

Max nTPM: 91.8
Min nTPM: 48.4
Sample A Female 91.8
Sample B Female 48.4
Sample C Male 90.0
Sample D Male 89.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 252.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 182.4
Samples: 4

Max nTPM: 201.8
Min nTPM: 158.9
Sample A Male 201.8
Sample B Male 178.6
Sample C Female 190.1
Sample D Female 158.9
Hippocampal formation
nTPM: 252.6
Samples: 4

Max nTPM: 320.0
Min nTPM: 203.5
Sample A Male 203.5
Sample B Male 245.7
Sample C Female 320.0
Sample D Female 241.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
656 Antisense, RP_Baylor_103140, Mouse strain C57BL/6J (56 days, male) 10.4
655 Antisense, RP_Baylor_103140, Mouse strain C57BL/6J (56 days, male) 8.1

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