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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
289.5
nTPM
FANTOM5:
454.5
Scaled Tags Per Million
Pig:
87.5
nTPM
Allen mouse:
10.5
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
289.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 149.8
2301
Female, age 85, both hemispheres
200.4
2188
Female, age 91, both hemispheres
154.0
1984
Male, age 76, both hemispheres
132.9
2090
Male, age 80, both hemispheres
111.8
Dorsal cochlear nucleus nTPM: 147.9
2802
Male, age 74, right hemisphere
170.7
2058
Male, age 76, both hemispheres
156.3
2370
Male, age 61, both hemispheres
149.0
2187
Female, age 91, both hemispheres
136.5
2378
Male, age 80, both hemispheres
127.1
Dorsal tegmental nucleus nTPM: 142.1
2358
Male, age 61, both hemispheres
171.4
2083
Male, age 80, both hemispheres
148.4
1936
Male, age 76, left hemisphere
128.4
2326
Male, age 74, both hemispheres
120.3
Dorsolateral tegmental area nTPM: 117.7
2141
Male, age 76, both hemispheres
142.3
2654
Male, age 80, both hemispheres
136.0
2751
Female, age 85, both hemispheres
110.9
2360
Male, age 74, both hemispheres
100.8
2337
Male, age 61, both hemispheres
98.5
Kolliker-Fuse nucleus nTPM: 196.6
2793
Female, age 91, left hemisphere
241.3
2163
Male, age 80, both hemispheres
237.3
2315
Male, age 76, right hemisphere
111.1
Lateral lemniscal nuclei nTPM: 266.9
2169
Male, age 76, both hemispheres
324.7
2036
Male, age 80, both hemispheres
315.1
2453
Male, age 74, right hemisphere
272.7
2320
Female, age 91, left hemisphere
227.8
2746
Female, age 85, left hemisphere
194.2
Lateral parabrachial nucleus nTPM: 171.5
2139
Female, age 85, right hemisphere
262.7
2790
Male, age 61, both hemispheres
176.1
2013
Male, age 80, both hemispheres
153.8
2792
Male, age 76, both hemispheres
93.3
Lateral vestibular nucleus nTPM: 221.1
2184
Male, age 76, both hemispheres
292.4
2311
Male, age 80, both hemispheres
149.8
Locus coeruleus nTPM: 234.9
2123
Female, age 91, both hemispheres
294.2
2720
Male, age 74, both hemispheres
286.7
1980
Male, age 76, both hemispheres
242.7
2162
Male, age 80, both hemispheres
231.9
2014
Male, age 55, unknown
229.9
2317
Female, age 72, unknown
192.5
2788
Male, age 74, unknown
166.8
Medial parabrachial nucleus nTPM: 159.0
2854
Male, age 80, both hemispheres
204.4
2156
Male, age 61, both hemispheres
189.6
2786
Male, age 76, both hemispheres
151.5
2170
Female, age 91, both hemispheres
137.8
2463
Female, age 85, right hemisphere
111.9
Medial periolivary nuclei nTPM: 237.9
2171
Female, age 85, both hemispheres
356.4
2063
Male, age 76, both hemispheres
269.8
2791
Male, age 74, right hemisphere
224.9
2458
Female, age 91, both hemispheres
201.2
2081
Male, age 80, both hemispheres
137.3
Motor facial nucleus nTPM: 261.0
2327
Male, age 80, both hemispheres
318.8
2697
Female, age 85, both hemispheres
298.5
2062
Male, age 76, both hemispheres
289.4
2365
Male, age 74, right hemisphere
245.5
2795
Female, age 91, both hemispheres
243.6
2126
Male, age 61, both hemispheres
170.4
Motor trigeminal nucleus nTPM: 197.5
2560
Male, age 74, both hemispheres
256.4
2079
Male, age 80, both hemispheres
236.7
2321
Female, age 91, both hemispheres
181.5
2335
Male, age 61, both hemispheres
163.8
2309
Male, age 76, both hemispheres
148.9
Nuclei of the trapezoid body nTPM: 264.9
2735
Female, age 85, both hemispheres
325.1
2159
Male, age 61, both hemispheres
281.4
1983
Male, age 76, both hemispheres
262.1
2368
Female, age 91, both hemispheres
236.2
2166
Male, age 80, both hemispheres
219.7
Nucleus raphe magnus nTPM: 289.5
2172
Female, age 85, both hemispheres
419.9
2160
Male, age 61, both hemispheres
301.0
2328
Male, age 80, both hemispheres
277.5
2455
Male, age 74, both hemispheres
273.0
2051
Male, age 76, both hemispheres
235.2
2459
Female, age 91, both hemispheres
230.3
Paramedian reticular nucleus nTPM: 191.7
2050
Female, age 85, both hemispheres
261.6
2313
Male, age 61, both hemispheres
211.7
2057
Male, age 80, both hemispheres
178.3
2052
Male, age 76, both hemispheres
115.3
Pedunculopontine tegmental nucleus nTPM: 154.0
2334
Male, age 80, both hemispheres
171.3
1921
Female, age 85, both hemispheres
152.6
2338
Male, age 61, both hemispheres
138.2
Pontine nuclei nTPM: 230.4
2787
Female, age 85, both hemispheres
390.8
1863
Male, age 55, unknown
284.5
1968
Male, age 76, left hemisphere
277.0
2109
Female, age 72, unknown
213.4
2727
Male, age 61, right hemisphere
198.9
2115
Male, age 80, left hemisphere
171.8
2454
Male, age 74, left hemisphere
165.5
2319
Female, age 91, both hemispheres
141.6
Pontine raphe nucleus nTPM: 210.0
2122
Female, age 85, midline
243.9
2853
Male, age 76, midline
176.0
Posteroventral cochlear nucleus nTPM: 125.0
2752
Female, age 85, both hemispheres
182.3
2371
Male, age 61, both hemispheres
149.8
2070
Male, age 76, both hemispheres
147.2
2341
Male, age 80, both hemispheres
89.6
2135
Female, age 91, both hemispheres
56.0
Principal sensory trigeminal nucleus nTPM: 244.2
2158
Male, age 61, both hemispheres
271.9
2324
Male, age 76, both hemispheres
263.0
2008
Male, age 80, left hemisphere
233.8
2367
Female, age 91, left hemisphere
208.1
Reticular pontine nucleus, caudal nTPM: 214.1
2332
Male, age 80, right hemisphere
308.0
2092
Male, age 76, both hemispheres
214.8
2457
Female, age 91, both hemispheres
193.9
2559
Male, age 74, both hemispheres
139.5
Reticular pontine nucleus, oral nTPM: 183.4
2361
Male, age 74, both hemispheres
216.9
2366
Female, age 91, both hemispheres
204.3
2012
Female, age 85, both hemispheres
200.8
2167
Male, age 76, both hemispheres
156.0
1939
Male, age 80, both hemispheres
139.1
Reticulotegmental nucleus nTPM: 198.8
2325
Male, age 76, both hemispheres
228.2
2333
Male, age 80, both hemispheres
204.0
2452
Male, age 74, both hemispheres
190.7
2322
Female, age 91, both hemispheres
172.3
Spinal trigeminal nucleus, oral nTPM: 195.1
2164
Male, age 80, both hemispheres
222.8
2737
Female, age 85, both hemispheres
197.8
1978
Male, age 76, both hemispheres
164.7
Subcoeruleus area nTPM: 173.2
2089
Male, age 76, left hemisphere
229.8
2323
Female, age 91, left hemisphere
215.1
1958
Male, age 80, both hemispheres
182.6
2451
Male, age 74, both hemispheres
145.1
2369
Female, age 85, left hemisphere
93.2
Superior olive nTPM: 231.8
1875
Female, age 85, both hemispheres
267.8
2329
Male, age 80, right hemisphere
257.5
2561
Female, age 91, both hemispheres
256.9
2364
Male, age 74, right hemisphere
192.0
2020
Male, age 76, both hemispheres
184.8
Ventral periolivary nuclei nTPM: 273.4
2130
Female, age 85, both hemispheres
375.5
2165
Male, age 80, both hemispheres
277.6
2794
Female, age 91, left hemisphere
265.7
2023
Male, age 76, both hemispheres
174.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 213.3
2449
Male, age 74, both hemispheres
255.8
2840
Female, age 85, both hemispheres
243.4
1959
Male, age 76, both hemispheres
230.8
2161
Male, age 80, both hemispheres
207.3
2456
Female, age 91, both hemispheres
186.9
2359
Male, age 61, both hemispheres
155.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
87.5
Pig sample
Sample description
nTPM
Pons nTPM: 87.5
Samples: 4
Max nTPM: 159.0
Min nTPM: 53.9
Sample A
Female
159.0
Sample B
Female
58.3
Sample C
Male
53.9
Sample D
Male
78.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
