PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:289.5 nTPM
FANTOM5:454.5 Scaled Tags Per Million
Pig:87.5 nTPM
Mouse:175.7 nTPM
Allen mouse:10.5 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 289.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 149.8
2301 Female, age 85, both hemispheres 200.4
2188 Female, age 91, both hemispheres 154.0
1984 Male, age 76, both hemispheres 132.9
2090 Male, age 80, both hemispheres 111.8
Area postrema
nTPM: 119.7
2054 Male, age 76, both hemispheres 140.9
2799 Male, age 61, both hemispheres 118.3
2306 Male, age 80, both hemispheres 99.8
Dorsal cochlear nucleus
nTPM: 147.9
2802 Male, age 74, right hemisphere 170.7
2058 Male, age 76, both hemispheres 156.3
2370 Male, age 61, both hemispheres 149.0
2187 Female, age 91, both hemispheres 136.5
2378 Male, age 80, both hemispheres 127.1
Dorsal medullary reticular nucleus
nTPM: 188.6
2040 Female, age 85, both hemispheres 232.8
2373 Male, age 61, both hemispheres 182.0
2088 Male, age 76, both hemispheres 150.9
Dorsal motor vagal complex
nTPM: 175.2
2133 Female, age 91, both hemispheres 231.3
2000 Male, age 74, unknown 196.8
2813 Female, age 72, unknown 179.1
2844 Male, age 55, unknown 175.8
2643 Male, age 74, both hemispheres 173.2
2797 Male, age 61, both hemispheres 165.7
2185 Male, age 76, both hemispheres 143.2
2807 Female, age 85, both hemispheres 136.4
Dorsal tegmental nucleus
nTPM: 142.1
2358 Male, age 61, both hemispheres 171.4
2083 Male, age 80, both hemispheres 148.4
1936 Male, age 76, left hemisphere 128.4
2326 Male, age 74, both hemispheres 120.3
Dorsolateral tegmental area
nTPM: 117.7
2141 Male, age 76, both hemispheres 142.3
2654 Male, age 80, both hemispheres 136.0
2751 Female, age 85, both hemispheres 110.9
2360 Male, age 74, both hemispheres 100.8
2337 Male, age 61, both hemispheres 98.5
Gigantocellular reticular nuclei, medullary
nTPM: 199.1
2462 Male, age 74, both hemispheres 311.1
2310 Male, age 80, both hemispheres 231.6
2387 Female, age 91, both hemispheres 189.0
2314 Male, age 61, both hemispheres 165.8
2022 Male, age 76, right hemisphere 155.0
1876 Female, age 85, both hemispheres 142.2
Gigantocellular reticular nuclei, pars
nTPM: 237.1
2168 Male, age 76, both hemispheres 300.7
2336 Male, age 61, both hemispheres 238.8
2330 Male, age 80, both hemispheres 224.9
2706 Male, age 80, both hemispheres 212.5
2084 Female, age 85, both hemispheres 208.4
Inferior olive
nTPM: 152.4
2628 Female, age 91, both hemispheres 234.6
2085 Female, age 85, both hemispheres 141.6
2178 Male, age 61, both hemispheres 137.8
2563 Male, age 74, both hemispheres 135.9
2379 Male, age 80, both hemispheres 112.1
Kolliker-Fuse nucleus
nTPM: 196.6
2793 Female, age 91, left hemisphere 241.3
2163 Male, age 80, both hemispheres 237.3
2315 Male, age 76, right hemisphere 111.1
Lateral lemniscal nuclei
nTPM: 266.9
2169 Male, age 76, both hemispheres 324.7
2036 Male, age 80, both hemispheres 315.1
2453 Male, age 74, right hemisphere 272.7
2320 Female, age 91, left hemisphere 227.8
2746 Female, age 85, left hemisphere 194.2
Lateral medullary reticular nucleus
nTPM: 159.8
2044 Male, age 76, both hemispheres 216.3
2374 Male, age 61, both hemispheres 189.0
2804 Female, age 91, both hemispheres 168.7
2190 Female, age 85, both hemispheres 143.0
2852 Male, age 80, both hemispheres 128.3
2305 Male, age 74, both hemispheres 113.5
Lateral parabrachial nucleus
nTPM: 171.5
2139 Female, age 85, right hemisphere 262.7
2790 Male, age 61, both hemispheres 176.1
2013 Male, age 80, both hemispheres 153.8
2792 Male, age 76, both hemispheres 93.3
Lateral vestibular nucleus
nTPM: 221.1
2184 Male, age 76, both hemispheres 292.4
2311 Male, age 80, both hemispheres 149.8
Locus coeruleus
nTPM: 234.9
2123 Female, age 91, both hemispheres 294.2
2720 Male, age 74, both hemispheres 286.7
1980 Male, age 76, both hemispheres 242.7
2162 Male, age 80, both hemispheres 231.9
2014 Male, age 55, unknown 229.9
2317 Female, age 72, unknown 192.5
2788 Male, age 74, unknown 166.8
Medial olivary nucleus
nTPM: 109.7
2851 Male, age 80, both hemispheres 157.2
1943 Male, age 61, both hemispheres 97.1
1962 Male, age 76, both hemispheres 92.2
2138 Female, age 91, both hemispheres 92.1
Medial parabrachial nucleus
nTPM: 159.0
2854 Male, age 80, both hemispheres 204.4
2156 Male, age 61, both hemispheres 189.6
2786 Male, age 76, both hemispheres 151.5
2170 Female, age 91, both hemispheres 137.8
2463 Female, age 85, right hemisphere 111.9
Medial periolivary nuclei
nTPM: 237.9
2171 Female, age 85, both hemispheres 356.4
2063 Male, age 76, both hemispheres 269.8
2791 Male, age 74, right hemisphere 224.9
2458 Female, age 91, both hemispheres 201.2
2081 Male, age 80, both hemispheres 137.3
Medial vestibular nucleus
nTPM: 224.8
2624 Male, age 61, both hemispheres 304.2
2134 Male, age 76, both hemispheres 273.1
2801 Male, age 74, both hemispheres 213.3
2803 Female, age 91, both hemispheres 191.8
2743 Female, age 85, both hemispheres 188.0
2093 Male, age 80, both hemispheres 178.5
Motor facial nucleus
nTPM: 261.0
2327 Male, age 80, both hemispheres 318.8
2697 Female, age 85, both hemispheres 298.5
2062 Male, age 76, both hemispheres 289.4
2365 Male, age 74, right hemisphere 245.5
2795 Female, age 91, both hemispheres 243.6
2126 Male, age 61, both hemispheres 170.4
Motor hypoglossal nucleus
nTPM: 203.5
2461 Male, age 61, both hemispheres 309.1
2132 Female, age 85, both hemispheres 201.4
2125 Female, age 91, both hemispheres 185.7
2182 Male, age 80, both hemispheres 183.9
2277 Male, age 76, both hemispheres 137.6
Motor trigeminal nucleus
nTPM: 197.5
2560 Male, age 74, both hemispheres 256.4
2079 Male, age 80, both hemispheres 236.7
2321 Female, age 91, both hemispheres 181.5
2335 Male, age 61, both hemispheres 163.8
2309 Male, age 76, both hemispheres 148.9
Nuclei of the trapezoid body
nTPM: 264.9
2735 Female, age 85, both hemispheres 325.1
2159 Male, age 61, both hemispheres 281.4
1983 Male, age 76, both hemispheres 262.1
2368 Female, age 91, both hemispheres 236.2
2166 Male, age 80, both hemispheres 219.7
Nucleus ambiguus
nTPM: 199.8
2096 Female, age 85, both hemispheres 286.0
2071 Male, age 76, both hemispheres 113.6
Nucleus cuneatus
nTPM: 154.1
2564 Male, age 74, both hemispheres 197.2
2562 Male, age 61, both hemispheres 195.0
2131 Male, age 76, both hemispheres 189.1
2100 Male, age 76, both hemispheres 176.1
2376 Male, age 61, both hemispheres 161.0
2381 Male, age 80, both hemispheres 145.3
2805 Female, age 91, both hemispheres 126.4
2808 Female, age 85, both hemispheres 99.0
2380 Male, age 80, both hemispheres 97.9
Nucleus gracilis
nTPM: 118.8
2627 Male, age 74, both hemispheres 161.6
2382 Male, age 80, both hemispheres 104.4
2299 Female, age 85, both hemispheres 90.4
Nucleus raphe magnus
nTPM: 289.5
2172 Female, age 85, both hemispheres 419.9
2160 Male, age 61, both hemispheres 301.0
2328 Male, age 80, both hemispheres 277.5
2455 Male, age 74, both hemispheres 273.0
2051 Male, age 76, both hemispheres 235.2
2459 Female, age 91, both hemispheres 230.3
Nucleus raphe obscurus
nTPM: 144.1
2800 Male, age 61, midline 194.5
2845 Female, age 85, midline 154.2
2142 Male, age 76, midline 83.8
Nucleus raphe pallidus
nTPM: 134.4
2183 Male, age 80, midline 192.5
1924 Male, age 61, midline 128.0
2145 Male, age 76, midline 82.8
Nucleus tractus solitarii
nTPM: 147.8
2307 Male, age 80, both hemispheres 172.9
2191 Female, age 85, both hemispheres 159.6
2656 Male, age 76, both hemispheres 150.2
2144 Female, age 91, right hemisphere 108.5
Paramedian reticular nucleus
nTPM: 191.7
2050 Female, age 85, both hemispheres 261.6
2313 Male, age 61, both hemispheres 211.7
2057 Male, age 80, both hemispheres 178.3
2052 Male, age 76, both hemispheres 115.3
Parvicellular reticular nuclei
nTPM: 207.8
2558 Male, age 74, both hemispheres 299.3
2119 Male, age 80, both hemispheres 165.0
2095 Male, age 76, both hemispheres 159.0
Parvicellular reticular nuclei, medullary
nTPM: 199.6
2091 Female, age 85, both hemispheres 220.6
2189 Female, age 91, both hemispheres 211.7
2181 Male, age 80, left hemisphere 166.4
Pedunculopontine tegmental nucleus
nTPM: 154.0
2334 Male, age 80, both hemispheres 171.3
1921 Female, age 85, both hemispheres 152.6
2338 Male, age 61, both hemispheres 138.2
Peritrigeminal nucleus
nTPM: 175.9
2179 Male, age 61, both hemispheres 182.8
2067 Female, age 85, both hemispheres 181.9
2136 Male, age 76, both hemispheres 163.1
Pontine nuclei
nTPM: 230.4
2787 Female, age 85, both hemispheres 390.8
1863 Male, age 55, unknown 284.5
1968 Male, age 76, left hemisphere 277.0
2109 Female, age 72, unknown 213.4
2727 Male, age 61, right hemisphere 198.9
2115 Male, age 80, left hemisphere 171.8
2454 Male, age 74, left hemisphere 165.5
2319 Female, age 91, both hemispheres 141.6
Pontine raphe nucleus
nTPM: 210.0
2122 Female, age 85, midline 243.9
2853 Male, age 76, midline 176.0
Posteroventral cochlear nucleus
nTPM: 125.0
2752 Female, age 85, both hemispheres 182.3
2371 Male, age 61, both hemispheres 149.8
2070 Male, age 76, both hemispheres 147.2
2341 Male, age 80, both hemispheres 89.6
2135 Female, age 91, both hemispheres 56.0
Prepositus hypoglossal nucleus
nTPM: 166.7
2855 Female, age 85, right hemisphere 187.2
2086 Male, age 80, both hemispheres 146.1
Principal sensory trigeminal nucleus
nTPM: 244.2
2158 Male, age 61, both hemispheres 271.9
2324 Male, age 76, both hemispheres 263.0
2008 Male, age 80, left hemisphere 233.8
2367 Female, age 91, left hemisphere 208.1
Reticular pontine nucleus, caudal
nTPM: 214.1
2332 Male, age 80, right hemisphere 308.0
2092 Male, age 76, both hemispheres 214.8
2457 Female, age 91, both hemispheres 193.9
2559 Male, age 74, both hemispheres 139.5
Reticular pontine nucleus, oral
nTPM: 183.4
2361 Male, age 74, both hemispheres 216.9
2366 Female, age 91, both hemispheres 204.3
2012 Female, age 85, both hemispheres 200.8
2167 Male, age 76, both hemispheres 156.0
1939 Male, age 80, both hemispheres 139.1
Reticulotegmental nucleus
nTPM: 198.8
2325 Male, age 76, both hemispheres 228.2
2333 Male, age 80, both hemispheres 204.0
2452 Male, age 74, both hemispheres 190.7
2322 Female, age 91, both hemispheres 172.3
Spinal trigeminal nucleus, caudal
nTPM: 196.9
2390 Female, age 91, both hemispheres 316.4
2447 Male, age 76, both hemispheres 179.6
2642 Male, age 74, both hemispheres 166.8
2312 Male, age 61, both hemispheres 161.3
2308 Male, age 80, both hemispheres 160.5
Spinal trigeminal nucleus, interpolar
nTPM: 262.1
2625 Male, age 61, both hemispheres 474.9
2066 Male, age 76, right hemisphere 255.9
2389 Female, age 91, both hemispheres 241.7
2033 Male, age 80, both hemispheres 177.1
2386 Female, age 85, both hemispheres 160.9
Spinal trigeminal nucleus, oral
nTPM: 195.1
2164 Male, age 80, both hemispheres 222.8
2737 Female, age 85, both hemispheres 197.8
1978 Male, age 76, both hemispheres 164.7
Spinal vestibular nucleus
nTPM: 170.9
2796 Male, age 61, both hemispheres 204.4
2186 Female, age 91, both hemispheres 198.6
2806 Female, age 85, both hemispheres 171.2
2748 Male, age 76, both hemispheres 154.5
2780 Male, age 80, both hemispheres 151.9
2384 Male, age 74, both hemispheres 144.8
Subcoeruleus area
nTPM: 173.2
2089 Male, age 76, left hemisphere 229.8
2323 Female, age 91, left hemisphere 215.1
1958 Male, age 80, both hemispheres 182.6
2451 Male, age 74, both hemispheres 145.1
2369 Female, age 85, left hemisphere 93.2
Superior olive
nTPM: 231.8
1875 Female, age 85, both hemispheres 267.8
2329 Male, age 80, right hemisphere 257.5
2561 Female, age 91, both hemispheres 256.9
2364 Male, age 74, right hemisphere 192.0
2020 Male, age 76, both hemispheres 184.8
Superior vestibular nucleus
nTPM: 125.0
2015 Male, age 80, both hemispheres 147.9
2061 Male, age 76, both hemispheres 128.6
2383 Male, age 74, both hemispheres 98.6
Ventral medullary reticular nucleus
nTPM: 165.7
2372 Male, age 61, both hemispheres 180.4
2060 Male, age 76, both hemispheres 151.0
Ventral periolivary nuclei
nTPM: 273.4
2130 Female, age 85, both hemispheres 375.5
2165 Male, age 80, both hemispheres 277.6
2794 Female, age 91, left hemisphere 265.7
2023 Male, age 76, both hemispheres 174.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 164.7
2741 Female, age 85, both hemispheres 186.8
1986 Male, age 76, both hemispheres 177.9
2302 Female, age 91, both hemispheres 172.8
2180 Male, age 61, both hemispheres 166.8
2118 Male, age 80, both hemispheres 119.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 213.3
2449 Male, age 74, both hemispheres 255.8
2840 Female, age 85, both hemispheres 243.4
1959 Male, age 76, both hemispheres 230.8
2161 Male, age 80, both hemispheres 207.3
2456 Female, age 91, both hemispheres 186.9
2359 Male, age 61, both hemispheres 155.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 454.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 256.1
FF:10182-103D2 60 years, female 348.8
FF:10165-103B3 76 years, female 163.4
Medulla oblongata
Scaled Tags Per Million: 182.4
FF:10038-101F2 18-64 years, mixed 267.0
FF:10155-103A2 76 years, female 147.3
FF:10174-103C3 60 years, female 132.9
Pons
Scaled Tags Per Million: 454.5
FF:10033-101E6 18-54 years, mixed 454.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 87.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 45.5
Samples: 4

Max nTPM: 59.6
Min nTPM: 31.9
Sample A Female 40.9
Sample B Female 59.6
Sample C Male 49.5
Sample D Male 31.9
Pons
nTPM: 87.5
Samples: 4

Max nTPM: 159.0
Min nTPM: 53.9
Sample A Female 159.0
Sample B Female 58.3
Sample C Male 53.9
Sample D Male 78.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 175.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 175.8
Samples: 4

Max nTPM: 179.1
Min nTPM: 168.3
Sample A Male 168.3
Sample B Male 179.1
Sample C Female 177.6
Sample D Female 178.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.9
656 Antisense, RP_Baylor_103140, Mouse strain C57BL/6J (56 days, male) 9.9
655 Antisense, RP_Baylor_103140, Mouse strain C57BL/6J (56 days, male) 9.6
Pons
Expression energy: 10.5
655 Antisense, RP_Baylor_103140, Mouse strain C57BL/6J (56 days, male) 10.5
656 Antisense, RP_Baylor_103140, Mouse strain C57BL/6J (56 days, male) 9.0

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