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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

144.091
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.2 nTPM
HPA Brain:96.2 nTPM
GTEx:54.2 nTPM
Pig:18.8 nTPM
Mouse:34.6 nTPM
Allen mouse:2.1 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA013768
Hypothalamus mean intensity 144.091
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 7.604
Periventricular hypothalamic nucleus 144.091
Supraoptic nucleus 18.116
Tuberal nucleus -
Ventral tuberomammillary nucleus -
Lateral preoptic area 12.625
Medial preoptic area 21.499
Suprachiasmatic nucleus 30.569
Paraventricular hypothalamic nucleus 72.477
Anterior hypothalamic area, central 13.095
Ventral medial hypothalamic nucleus -
Ventral medial hypothalamic nucleus* -
Arcuate nucleus -
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 7.766
Dorsal medial hypothalamic nucleus -
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 6.7
1961 Female, age 42, unknown 11.0
2226 Male, age 75, left hemisphere 2.3
Dorsomedial nucleus
nTPM: 12.3
2017 Female, age 42, unknown 20.8
2041 Female, age 72, unknown 16.2
1989 Male, age 62, unknown 0.0
Lateral hypothalamic area
nTPM: 96.2
1791 Male, age 80, right hemisphere 199.7
2412 Male, age 62, unknown 98.3
2271 Male, age 75, both hemispheres 43.7
2228 Male, age 66, unknown 43.1
Mammillary body
nTPM: 2.2
1834 Female, age 42, unknown 6.6
1945 Male, age 80, right hemisphere 2.5
2413 Male, age 66, unknown 1.7
1948 Female, age 72, unknown 0.5
1923 Female, age 72, unknown 0.0
Paraventricular nucleus
nTPM: 31.4
2700 Male, age 62, unknown 31.4
Preoptic area
nTPM: 23.4
1907 Male, age 80, right hemisphere 67.4
1861 Female, age 42, unknown 1.6
2414 Female, age 72, unknown 1.2
Supraoptic nucleus
nTPM: 63.4
2043 Male, age 62, unknown 110.6
1894 Female, age 72, unknown 55.6
2835 Female, age 72, unknown 23.9
Ventromedial nucleus
nTPM: 6.2
1822 Female, age 42, unknown 11.3
1982 Female, age 72, unknown 1.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 54.2
Samples: 202

Max nTPM: 598.0
Min nTPM: 0.0
Std nTPM: 102.7
Median nTPM: 14.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 598.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 552.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 541.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 492.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 461.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 424.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 310.9
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 308.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 295.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 279.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 274.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 257.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 227.2
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 225.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 219.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 201.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 194.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 183.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 168.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 156.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 149.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 141.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 139.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 134.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 126.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 120.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 117.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 113.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 106.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 101.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 98.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 97.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 96.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 91.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 90.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 89.1
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 85.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 75.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 72.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 71.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 70.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 69.0
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 66.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 62.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 57.7
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 57.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 57.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 56.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 55.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 54.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 51.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 44.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 43.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 42.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 41.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 41.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 40.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 40.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 39.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 39.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 38.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 38.2
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 34.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 34.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 34.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 32.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 30.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 29.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 28.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 28.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 28.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 27.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 27.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 26.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 24.6
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 24.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 24.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 23.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 22.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 22.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 21.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 21.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 19.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 19.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 19.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 19.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 19.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 19.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 19.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 18.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 17.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 16.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 15.9
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 15.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 15.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 15.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 15.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 15.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 15.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 14.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 13.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 12.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 12.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 12.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 11.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 11.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 11.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 11.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 10.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 9.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 9.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 9.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 9.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 9.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 8.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 8.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 8.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 8.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 7.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 7.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 7.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 7.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 7.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 7.2
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 7.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 7.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 7.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 6.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 5.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 5.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 5.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 5.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 5.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 5.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 5.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 5.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 5.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 4.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 4.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 4.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 4.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 4.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 4.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 3.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 3.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 3.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 3.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 3.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 3.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 3.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 3.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 3.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 3.1
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 3.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 2.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 2.8
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 2.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 2.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 2.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 2.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 2.5
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 2.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 2.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 2.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 1.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 1.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 0.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 0.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 0.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 0.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 0.6
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 0.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 0.5
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 0.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 0.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 0.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 0.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 0.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 0.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 0.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 0.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 0.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 0.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 0.1
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 0.0
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 0.0
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 0.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 18.9
Samples: 4

Max nTPM: 46.5
Min nTPM: 4.1
Sample A Female 17.4
Sample B Female 46.5
Sample C Male 7.4
Sample D Male 4.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 34.6
Samples: 4

Max nTPM: 35.9
Min nTPM: 32.2
Sample A Male 35.5
Sample B Male 35.9
Sample C Female 34.6
Sample D Female 32.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.1
1056 Antisense, RP_Baylor_103073, Mouse strain C57BL/6J (56 days, male) 2.1
1058 Antisense, RP_Baylor_103073, Mouse strain C57BL/6J (56 days, male) 1.0

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