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RPS17
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:664.7 nTPM
FANTOM5:45.7 Scaled Tags Per Million
Pig:85.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055060
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

664.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 664.7
Samples: 246

Max nTPM: 1658.6
Min nTPM: 211.6
Std nTPM: 196.3
Median nTPM: 634.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1658.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1484.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1431.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1223.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1189.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1179.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1141.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1131.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1120.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1074.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1058.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1054.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1028.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1023.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1023.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 992.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 978.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 965.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 963.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 946.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 899.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 897.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 891.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 886.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 880.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 870.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 870.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 868.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 867.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 864.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 858.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 856.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 855.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 847.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 844.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 841.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 832.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 824.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 822.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 815.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 812.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 807.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 805.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 804.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 794.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 793.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 788.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 785.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 785.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 778.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 777.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 777.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 776.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 772.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 771.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 769.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 767.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 764.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 759.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 757.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 755.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 755.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 754.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 752.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 748.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 748.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 747.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 747.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 746.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 744.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 740.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 736.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 735.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 734.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 731.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 731.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 725.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 722.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 718.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 714.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 712.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 708.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 707.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 706.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 702.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 701.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 701.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 700.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 700.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 696.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 692.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 692.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 688.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 686.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 684.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 684.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 682.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 682.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 680.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 678.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 676.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 667.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 666.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 664.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 664.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 661.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 661.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 660.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 659.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 658.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 657.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 654.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 653.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 653.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 651.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 651.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 650.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 643.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 640.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 639.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 639.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 638.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 636.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 632.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 631.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 631.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 630.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 630.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 630.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 626.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 625.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 624.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 623.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 621.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 618.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 618.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 612.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 608.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 604.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 602.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 599.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 599.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 597.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 596.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 596.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 596.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 596.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 595.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 591.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 589.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 589.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 587.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 587.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 584.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 584.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 583.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 583.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 581.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 581.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 579.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 575.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 575.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 574.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 573.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 573.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 568.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 564.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 561.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 560.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 558.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 557.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 556.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 556.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 556.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 551.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 550.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 550.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 548.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 543.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 543.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 542.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 542.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 538.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 536.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 536.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 534.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 533.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 533.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 522.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 519.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 519.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 519.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 517.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 517.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 516.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 511.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 511.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 509.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 509.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 509.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 508.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 497.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 496.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 495.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 492.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 492.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 485.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 484.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 482.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 479.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 477.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 477.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 472.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 467.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 465.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 465.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 461.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 459.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 457.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 449.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 448.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 447.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 446.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 441.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 439.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 439.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 432.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 430.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 428.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 428.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 427.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 425.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 419.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 417.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 415.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 415.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 414.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 405.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 404.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 398.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 389.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 389.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 385.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 379.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 364.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 211.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

45.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 45.7
FF:10164-103B2 76 years, female 45.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.2
Pig sample Sample description nTPM
Caudate
nTPM: 85.2
Samples: 4

Max nTPM: 93.3
Min nTPM: 72.6
Sample A Female 85.4
Sample B Female 93.3
Sample C Male 89.4
Sample D Male 72.6

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