We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CRIP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CRIP2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:217.7 nTPM
HPA Brain:163.9 nTPM
GTEx:217.7 nTPM
FANTOM5:79.1 Scaled Tags Per Million
Pig:76.2 nTPM
Mouse:153.7 nTPM
Allen mouse:3.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042664
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

163.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 146.6
2290 Female, age 72, unknown 205.3
1857 Female, age 85, left hemisphere 161.7
2846 Female, age 79, unknown 160.0
1781 Male, age 74, unknown 137.0
2289 Male, age 61, right hemisphere 135.0
1854 Male, age 80, left hemisphere 128.4
2481 Female, age 94, left hemisphere 125.9
2288 Male, age 75, left hemisphere 119.2
Globus pallidus, externus
nTPM: 90.3
1996 Male, age 80, right hemisphere 112.4
2395 Male, age 75, both hemispheres 101.6
2646 Male, age 61, right hemisphere 85.6
2772 Female, age 79, unknown 81.2
2567 Female, age 72, unknown 70.7
Globus pallidus, internus
nTPM: 95.3
2483 Female, age 94, right hemisphere 142.5
2287 Male, age 75, right hemisphere 127.7
1818 Male, age 74, unknown 91.4
2037 Male, age 80, right hemisphere 86.7
2778 Female, age 91, both hemispheres 75.4
2566 Female, age 72, unknown 72.6
2111 Female, age 85, right hemisphere 70.7
Nucleus accumbens
nTPM: 125.3
1783 Male, age 74, unknown 162.9
1806 Female, age 85, left hemisphere 150.0
2698 Female, age 72, unknown 142.0
1856 Female, age 91, right hemisphere 124.8
2286 Male, age 75, left hemisphere 120.2
2824 Male, age 61, right hemisphere 113.8
2732 Male, age 80, right hemisphere 112.7
2391 Female, age 94, left hemisphere 75.9
Nucleus basalis of Meynert
nTPM: 118.7
2484 Female, age 94, left hemisphere 145.3
2821 Male, age 75, both hemispheres 117.6
2569 Male, age 61, both hemispheres 106.2
2393 Male, age 80, right hemisphere 105.4
Nucleus of the diagonal band
nTPM: 163.9
2195 Female, age 85, both hemispheres 194.5
2775 Male, age 80, right hemisphere 172.4
1979 Male, age 74, unknown 152.6
2029 Male, age 61, right hemisphere 152.2
1812 Female, age 91, both hemispheres 147.8
Putamen
nTPM: 125.1
2466 Female, age 79, unknown 146.9
2647 Male, age 75, left hemisphere 138.5
2489 Female, age 72, unknown 132.1
1829 Male, age 74, unknown 121.1
1838 Male, age 80, right hemisphere 121.1
2482 Female, age 94, left hemisphere 110.7
1937 Female, age 91, right hemisphere 104.9
Septal nuclei
nTPM: 156.1
1960 Male, age 74, unknown 233.9
2031 Female, age 72, unknown 179.1
2059 Female, age 85, both hemispheres 177.1
2629 Female, age 94, right hemisphere 140.4
2009 Female, age 91, both hemispheres 127.0
2394 Male, age 61, left hemisphere 118.6
2199 Male, age 80, right hemisphere 116.5
Stria terminalis, bed nucleus
nTPM: 124.3
2486 Female, age 94, both hemispheres 134.9
1974 Female, age 91, both hemispheres 123.5
2201 Male, age 74, unknown 114.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 193.6
Samples: 246

Max nTPM: 365.0
Min nTPM: 54.4
Std nTPM: 49.6
Median nTPM: 186.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 365.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 356.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 339.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 338.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 328.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 327.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 325.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 322.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 307.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 298.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 288.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 281.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 278.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 275.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 273.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 271.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 269.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 268.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 268.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 268.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 265.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 265.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 264.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 259.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 256.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 255.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 254.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 253.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 250.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 249.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 248.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 246.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 245.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 243.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 242.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 238.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 235.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 234.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 234.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 232.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 232.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 231.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 230.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 230.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 229.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 229.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 229.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 228.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 228.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 227.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 227.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 227.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 226.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 226.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 225.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 224.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 224.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 223.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 223.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 223.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 222.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 221.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 220.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 220.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 220.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 220.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 216.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 215.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 215.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 215.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 214.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 214.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 213.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 213.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 213.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 212.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 211.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 210.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 210.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 209.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 209.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 209.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 208.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 207.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 207.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 206.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 205.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 205.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 205.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 204.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 203.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 203.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 202.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 202.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 201.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 200.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 198.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 198.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 197.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 197.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 196.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 195.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 195.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 195.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 195.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 194.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 194.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 194.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 194.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 193.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 193.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 193.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 192.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 191.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 191.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 190.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 189.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 189.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 188.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 188.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 188.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 187.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 187.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 186.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 186.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 186.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 186.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 185.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 185.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 185.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 185.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 184.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 183.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 183.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 182.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 182.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 182.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 182.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 182.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 182.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 181.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 181.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 180.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 180.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 180.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 179.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 179.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 179.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 178.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 178.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 178.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 178.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 177.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 177.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 177.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 177.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 176.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 176.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 176.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 175.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 173.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 173.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 173.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 173.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 171.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 171.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 170.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 170.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 170.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 169.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 168.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 168.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 168.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 168.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 167.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 167.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 166.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 165.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 165.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 165.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 165.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 164.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 160.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 160.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 159.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 159.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 159.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 158.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 158.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 157.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 157.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 157.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 157.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 156.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 156.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 155.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 154.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 153.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 153.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 153.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 153.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 152.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 151.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 151.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 150.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 150.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 149.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 148.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 147.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 147.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 147.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 147.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 146.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 145.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 143.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 142.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 142.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 140.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 138.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 138.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 138.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 137.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 137.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 137.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 135.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 133.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 130.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 130.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 128.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 127.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 127.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 126.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 124.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 124.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 123.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 113.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 113.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 110.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 106.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 101.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 100.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 98.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 93.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 75.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 54.4
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 217.7
Samples: 246

Max nTPM: 505.0
Min nTPM: 63.2
Std nTPM: 65.1
Median nTPM: 211.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 505.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 438.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 429.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 383.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 383.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 369.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 368.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 365.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 350.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 347.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 339.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 336.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 333.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 328.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 326.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 323.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 321.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 321.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 317.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 316.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 314.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 314.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 306.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 305.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 303.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 302.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 302.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 295.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 294.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 294.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 289.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 286.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 286.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 285.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 283.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 283.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 282.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 275.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 275.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 275.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 272.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 272.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 271.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 271.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 270.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 270.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 270.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 268.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 266.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 266.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 265.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 262.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 262.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 258.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 258.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 258.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 257.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 257.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 257.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 257.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 255.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 255.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 254.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 254.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 253.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 253.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 252.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 250.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 247.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 247.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 245.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 245.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 245.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 245.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 242.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 242.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 239.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 237.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 237.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 236.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 235.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 234.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 234.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 233.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 232.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 230.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 229.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 229.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 229.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 228.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 228.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 227.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 227.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 227.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 225.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 225.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 224.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 224.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 223.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 222.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 221.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 220.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 220.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 220.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 219.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 218.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 218.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 217.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 217.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 217.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 217.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 216.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 216.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 215.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 215.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 214.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 214.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 214.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 214.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 212.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 212.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 211.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 211.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 211.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 209.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 209.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 208.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 207.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 204.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 204.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 203.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 201.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 201.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 200.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 200.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 199.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 199.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 199.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 198.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 198.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 198.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 197.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 197.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 197.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 197.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 196.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 196.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 195.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 195.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 194.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 193.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 193.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 193.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 192.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 192.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 192.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 191.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 191.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 190.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 190.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 189.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 189.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 187.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 186.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 185.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 185.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 185.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 184.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 181.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 181.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 180.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 177.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 176.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 176.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 175.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 175.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 175.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 174.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 174.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 173.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 173.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 172.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 172.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 172.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 171.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 170.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 170.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 170.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 169.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 168.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 168.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 168.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 167.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 166.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 165.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 165.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 164.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 164.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 164.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 163.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 163.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 162.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 162.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 162.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 162.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 161.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 161.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 160.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 160.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 159.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 159.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 157.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 156.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 155.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 155.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 154.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 153.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 153.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 152.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 151.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 150.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 148.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 147.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 146.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 145.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 145.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 141.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 141.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 138.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 137.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 136.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 134.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 133.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 133.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 131.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 129.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 128.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 105.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 104.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 100.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 99.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 99.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 94.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 89.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 73.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 63.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 188.6
Samples: 205

Max nTPM: 341.7
Min nTPM: 86.4
Std nTPM: 50.2
Median nTPM: 186.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 341.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 340.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 302.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 295.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 293.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 290.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 287.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 284.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 276.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 276.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 274.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 274.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 269.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 269.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 265.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 262.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 260.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 258.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 258.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 258.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 257.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 257.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 257.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 257.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 255.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 254.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 253.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 249.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 249.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 247.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 246.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 245.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 242.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 241.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 241.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 239.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 239.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 238.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 237.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 237.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 235.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 235.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 230.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 230.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 229.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 228.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 228.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 226.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 225.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 225.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 225.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 225.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 223.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 222.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 222.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 221.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 219.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 218.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 214.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 213.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 212.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 211.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 211.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 210.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 210.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 209.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 207.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 205.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 204.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 203.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 202.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 202.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 200.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 198.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 198.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 197.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 197.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 197.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 196.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 196.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 196.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 195.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 195.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 194.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 192.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 191.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 191.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 191.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 191.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 191.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 191.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 190.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 190.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 190.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 190.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 189.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 189.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 188.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 187.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 187.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 187.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 186.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 186.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 185.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 185.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 185.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 184.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 182.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 182.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 181.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 180.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 180.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 180.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 179.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 179.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 178.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 178.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 178.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 176.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 175.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 174.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 174.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 173.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 173.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 173.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 170.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 168.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 167.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 167.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 164.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 164.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 164.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 164.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 163.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 161.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 160.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 160.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 159.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 156.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 156.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 156.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 156.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 155.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 155.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 155.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 155.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 154.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 153.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 152.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 151.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 151.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 151.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 150.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 149.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 149.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 148.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 147.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 146.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 146.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 146.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 146.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 146.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 145.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 145.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 144.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 144.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 143.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 141.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 140.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 140.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 140.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 140.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 139.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 138.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 137.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 137.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 137.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 136.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 136.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 135.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 132.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 132.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 131.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 130.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 129.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 129.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 125.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 118.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 116.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 116.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 114.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 113.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 113.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 111.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 110.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 110.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 108.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 106.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 106.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 106.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 104.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 102.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 101.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 93.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 86.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

79.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 66.1
FF:10164-103B2 76 years, female 66.1
Nucleus accumbens
Scaled Tags Per Million: 79.1
FF:10037-101F1 23-56 years, mixed 79.1
Putamen
Scaled Tags Per Million: 78.1
FF:10176-103C5 60 years, female 78.1
Globus pallidus
Scaled Tags Per Million: 30.0
FF:10161-103A8 76 years, female 33.3
FF:10175-103C4 60 years, female 26.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.2
Pig sample Sample description nTPM
Caudate
nTPM: 76.2
Samples: 4

Max nTPM: 95.8
Min nTPM: 57.1
Sample A Female 57.1
Sample B Female 78.2
Sample C Male 95.8
Sample D Male 73.6
Putamen
nTPM: 73.5
Samples: 4

Max nTPM: 94.6
Min nTPM: 46.1
Sample A Female 46.1
Sample B Female 63.7
Sample C Male 89.4
Sample D Male 94.6
Septum
nTPM: 53.2
Samples: 4

Max nTPM: 61.7
Min nTPM: 42.2
Sample A Female 48.7
Sample B Female 42.2
Sample C Male 61.7
Sample D Male 60.1
Ventral pallidum
nTPM: 52.8
Samples: 4

Max nTPM: 71.3
Min nTPM: 39.2
Sample A Female 46.4
Sample B Female 39.2
Sample C Male 71.3
Sample D Male 54.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 153.7
Samples: 4

Max nTPM: 184.4
Min nTPM: 128.4
Sample A Male 151.7
Sample B Male 184.4
Sample C Female 128.4
Sample D Female 150.2
Septum
nTPM: 118.3
Samples: 4

Max nTPM: 129.8
Min nTPM: 99.3
Sample A Male 129.8
Sample B Male 121.8
Sample C Female 122.2
Sample D Female 99.3
Ventral forebrain
nTPM: 125.3
Samples: 4

Max nTPM: 152.0
Min nTPM: 104.9
Sample A Male 121.5
Sample B Male 104.9
Sample C Female 152.0
Sample D Female 122.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.1
70612727 Antisense, RP_050725_01_C05, Mouse strain C57BL/6J (56 days, male) 4.5
75695661 Antisense, RP_060518_04_C12, Mouse strain C57BL/6J (56 days, male) 1.7
Pallidum
Expression energy: 1.0
70612727 Antisense, RP_050725_01_C05, Mouse strain C57BL/6J (56 days, male) 1.3
75695661 Antisense, RP_060518_04_C12, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org