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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:97.2 nTPM
GTEx:97.2 nTPM
FANTOM5:83.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042664
Squamous epithelial cells Not detected


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 97.2
Samples: 156

Max nTPM: 293.5
Min nTPM: 24.9
Std nTPM: 52.5
Median nTPM: 84.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 293.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 284.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 255.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 241.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 236.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 223.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 219.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 210.9
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 210.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 201.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 199.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 181.7
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 175.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 175.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 168.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 167.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 162.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 160.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 160.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 157.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 153.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 151.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 150.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 146.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 140.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 139.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 138.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 138.5
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 136.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 134.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 134.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 134.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 132.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 129.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 127.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 126.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 121.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 121.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 118.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 117.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 116.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 115.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 115.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 113.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 113.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 112.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 112.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 111.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 111.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 110.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 108.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 107.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 106.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 103.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 102.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 101.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 101.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 100.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 99.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 99.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 99.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 96.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 95.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 93.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 93.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 92.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 92.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 91.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 91.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 90.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 90.8
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 89.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 88.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 87.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 87.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 85.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 85.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 85.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 83.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 82.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 80.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 80.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 79.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 79.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 78.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 78.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 77.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 77.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 76.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 76.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 76.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 75.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 74.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 74.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 74.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 74.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 74.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 73.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 73.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 72.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 71.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 71.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 71.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 69.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 68.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 68.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 66.4
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 65.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 65.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 63.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 63.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 63.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 60.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 60.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 60.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 59.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 59.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 59.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 58.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 57.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 57.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 55.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 54.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 54.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 54.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 53.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 52.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 52.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 52.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 52.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 49.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 49.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 48.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 48.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 48.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 48.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 47.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 47.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 47.1
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 46.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 45.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 44.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 40.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 40.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 39.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 38.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 38.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 37.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 37.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 36.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 34.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 32.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 30.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 29.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 25.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 24.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

83.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 83.0
FF:10204-103F6 68 years, female 83.0

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