We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ACTG1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ACTG1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:763.5 nTPM
HPA Brain:740.0 nTPM
GTEx:763.5 nTPM
FANTOM5:2108.9 Scaled Tags Per Million
Pig:1343.4 nTPM
Mouse:1943.6 nTPM
Allen mouse:18.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041264Antibody HPA041271
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

740.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 678.6
2290 Female, age 72, unknown 814.1
1857 Female, age 85, left hemisphere 810.0
1854 Male, age 80, left hemisphere 787.6
2846 Female, age 79, unknown 690.3
1781 Male, age 74, unknown 679.8
2288 Male, age 75, left hemisphere 655.9
2481 Female, age 94, left hemisphere 560.1
2289 Male, age 61, right hemisphere 430.7
Globus pallidus, externus
nTPM: 678.2
2772 Female, age 79, unknown 831.7
1996 Male, age 80, right hemisphere 819.4
2395 Male, age 75, both hemispheres 796.9
2646 Male, age 61, right hemisphere 561.8
2567 Female, age 72, unknown 381.0
Globus pallidus, internus
nTPM: 691.7
2287 Male, age 75, right hemisphere 962.9
2483 Female, age 94, right hemisphere 751.6
1818 Male, age 74, unknown 688.2
2778 Female, age 91, both hemispheres 680.7
2037 Male, age 80, right hemisphere 642.3
2111 Female, age 85, right hemisphere 574.8
2566 Female, age 72, unknown 541.1
Nucleus accumbens
nTPM: 717.0
1856 Female, age 91, right hemisphere 877.5
1806 Female, age 85, left hemisphere 875.1
2698 Female, age 72, unknown 799.8
1783 Male, age 74, unknown 771.0
2286 Male, age 75, left hemisphere 711.4
2732 Male, age 80, right hemisphere 626.8
2824 Male, age 61, right hemisphere 571.2
2391 Female, age 94, left hemisphere 503.0
Nucleus basalis of Meynert
nTPM: 603.7
2821 Male, age 75, both hemispheres 646.5
2393 Male, age 80, right hemisphere 623.5
2569 Male, age 61, both hemispheres 576.7
2484 Female, age 94, left hemisphere 568.3
Nucleus of the diagonal band
nTPM: 740.0
2195 Female, age 85, both hemispheres 883.4
2775 Male, age 80, right hemisphere 807.2
1812 Female, age 91, both hemispheres 802.9
1979 Male, age 74, unknown 688.4
2029 Male, age 61, right hemisphere 518.3
Putamen
nTPM: 640.5
1838 Male, age 80, right hemisphere 752.9
1937 Female, age 91, right hemisphere 690.6
2466 Female, age 79, unknown 689.8
2482 Female, age 94, left hemisphere 606.5
1829 Male, age 74, unknown 592.2
2647 Male, age 75, left hemisphere 585.2
2489 Female, age 72, unknown 566.4
Septal nuclei
nTPM: 739.6
2031 Female, age 72, unknown 853.1
1960 Male, age 74, unknown 847.9
2629 Female, age 94, right hemisphere 746.0
2059 Female, age 85, both hemispheres 739.8
2199 Male, age 80, right hemisphere 723.7
2009 Female, age 91, both hemispheres 668.3
2394 Male, age 61, left hemisphere 598.6
Stria terminalis, bed nucleus
nTPM: 689.4
1974 Female, age 91, both hemispheres 754.2
2486 Female, age 94, both hemispheres 722.9
2201 Male, age 74, unknown 591.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

763.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 626.9
Samples: 246

Max nTPM: 1405.5
Min nTPM: 312.2
Std nTPM: 165.4
Median nTPM: 597.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1405.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1265.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1158.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1045.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1023.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1003.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 991.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 977.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 970.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 934.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 918.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 914.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 906.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 884.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 883.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 883.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 878.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 876.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 865.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 865.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 861.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 858.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 848.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 848.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 844.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 840.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 839.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 835.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 833.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 829.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 821.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 816.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 815.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 813.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 803.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 802.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 795.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 791.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 788.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 784.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 782.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 779.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 773.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 772.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 772.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 770.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 766.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 761.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 759.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 755.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 752.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 748.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 745.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 745.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 742.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 739.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 731.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 731.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 731.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 730.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 729.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 727.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 726.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 721.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 719.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 717.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 715.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 711.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 708.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 708.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 707.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 706.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 702.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 702.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 698.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 692.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 691.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 691.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 689.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 684.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 678.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 675.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 675.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 674.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 673.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 669.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 666.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 665.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 664.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 664.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 658.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 655.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 652.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 649.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 649.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 647.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 646.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 645.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 644.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 644.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 644.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 642.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 638.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 631.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 631.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 630.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 628.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 626.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 625.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 625.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 625.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 622.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 608.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 608.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 608.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 607.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 605.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 604.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 603.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 601.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 600.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 598.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 597.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 596.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 595.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 594.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 592.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 590.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 589.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 589.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 587.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 585.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 585.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 584.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 581.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 579.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 578.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 577.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 576.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 576.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 574.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 573.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 569.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 568.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 567.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 567.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 566.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 565.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 564.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 564.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 562.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 561.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 560.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 558.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 556.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 556.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 550.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 549.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 548.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 548.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 547.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 547.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 545.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 542.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 540.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 537.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 536.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 536.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 532.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 532.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 531.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 529.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 523.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 518.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 518.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 517.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 516.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 515.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 512.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 512.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 512.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 512.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 512.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 511.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 507.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 507.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 507.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 504.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 504.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 503.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 503.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 501.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 494.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 491.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 490.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 488.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 483.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 483.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 481.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 479.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 478.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 477.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 474.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 472.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 469.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 469.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 468.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 466.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 465.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 461.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 457.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 457.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 454.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 452.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 450.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 449.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 448.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 448.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 446.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 445.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 444.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 444.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 435.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 434.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 430.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 425.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 423.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 423.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 422.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 421.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 416.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 416.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 407.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 406.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 398.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 394.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 391.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 390.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 388.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 381.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 379.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 373.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 372.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 360.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 358.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 312.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 763.5
Samples: 246

Max nTPM: 2291.0
Min nTPM: 280.8
Std nTPM: 224.0
Median nTPM: 742.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 2291.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1494.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1322.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1278.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1174.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1169.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1168.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1158.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1136.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1123.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1120.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1091.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1090.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1089.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1086.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1084.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1074.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1068.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1060.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1058.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1056.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1049.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1047.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1046.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1045.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1035.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1034.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1032.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1017.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1003.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 997.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 995.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 988.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 987.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 987.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 981.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 980.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 980.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 974.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 971.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 960.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 958.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 956.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 953.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 950.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 947.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 947.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 946.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 944.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 942.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 939.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 937.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 933.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 929.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 925.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 924.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 921.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 920.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 913.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 907.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 906.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 906.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 904.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 900.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 893.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 892.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 889.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 889.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 889.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 877.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 875.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 874.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 870.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 869.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 863.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 862.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 852.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 851.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 846.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 840.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 832.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 831.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 831.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 824.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 821.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 813.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 812.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 812.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 811.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 811.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 810.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 807.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 806.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 805.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 803.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 800.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 795.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 794.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 794.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 790.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 790.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 789.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 789.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 788.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 787.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 785.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 783.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 783.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 783.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 781.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 778.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 775.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 773.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 770.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 769.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 768.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 767.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 766.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 764.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 763.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 759.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 747.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 743.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 741.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 739.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 738.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 738.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 738.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 737.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 734.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 732.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 730.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 730.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 728.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 722.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 721.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 721.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 720.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 720.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 717.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 716.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 714.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 713.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 712.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 712.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 707.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 706.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 703.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 698.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 698.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 695.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 691.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 690.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 689.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 689.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 687.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 680.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 680.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 677.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 675.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 668.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 668.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 663.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 659.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 655.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 650.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 646.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 644.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 638.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 637.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 635.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 634.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 625.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 621.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 619.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 619.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 615.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 609.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 606.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 605.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 603.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 596.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 595.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 595.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 595.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 595.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 595.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 594.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 590.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 588.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 585.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 585.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 579.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 579.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 572.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 568.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 565.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 560.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 558.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 557.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 556.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 552.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 551.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 549.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 548.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 543.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 540.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 539.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 539.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 538.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 537.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 535.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 535.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 528.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 527.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 518.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 515.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 511.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 509.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 507.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 504.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 503.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 500.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 499.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 496.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 490.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 480.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 480.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 477.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 475.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 474.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 471.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 467.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 463.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 459.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 458.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 453.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 449.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 446.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 434.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 423.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 419.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 388.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 371.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 324.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 280.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 621.7
Samples: 205

Max nTPM: 1191.6
Min nTPM: 298.7
Std nTPM: 153.0
Median nTPM: 590.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1191.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1171.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1154.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1131.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1060.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1035.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 992.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 963.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 915.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 892.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 883.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 875.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 871.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 869.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 868.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 866.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 860.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 841.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 841.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 839.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 831.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 820.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 817.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 813.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 800.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 800.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 797.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 788.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 773.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 773.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 765.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 750.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 748.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 746.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 742.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 742.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 733.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 732.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 731.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 730.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 724.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 721.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 716.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 703.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 702.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 700.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 700.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 695.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 692.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 686.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 684.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 683.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 677.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 675.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 673.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 672.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 671.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 671.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 670.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 668.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 664.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 662.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 659.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 657.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 655.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 654.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 654.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 650.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 650.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 649.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 648.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 647.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 646.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 645.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 645.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 638.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 638.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 637.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 636.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 636.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 627.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 626.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 626.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 625.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 624.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 621.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 619.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 619.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 617.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 617.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 615.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 615.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 612.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 610.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 610.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 607.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 604.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 601.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 600.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 599.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 598.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 594.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 590.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 590.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 588.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 588.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 587.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 587.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 584.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 582.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 579.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 576.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 575.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 575.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 573.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 572.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 572.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 571.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 570.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 568.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 568.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 567.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 566.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 565.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 565.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 564.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 562.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 560.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 558.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 557.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 556.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 556.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 554.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 553.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 553.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 553.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 550.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 550.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 546.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 546.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 542.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 536.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 536.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 534.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 534.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 533.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 532.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 530.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 528.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 527.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 527.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 526.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 525.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 524.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 524.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 523.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 522.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 521.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 520.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 517.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 515.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 513.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 512.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 509.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 508.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 507.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 506.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 506.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 502.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 500.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 499.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 497.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 497.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 496.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 495.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 495.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 494.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 492.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 483.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 481.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 473.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 468.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 466.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 466.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 465.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 456.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 455.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 452.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 450.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 442.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 439.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 438.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 428.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 424.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 422.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 416.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 402.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 393.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 381.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 377.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 374.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 373.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 353.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 315.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 298.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2108.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1656.6
FF:10164-103B2 76 years, female 1656.6
Nucleus accumbens
Scaled Tags Per Million: 1903.7
FF:10037-101F1 23-56 years, mixed 1903.7
Putamen
Scaled Tags Per Million: 2108.9
FF:10176-103C5 60 years, female 2108.9
Globus pallidus
Scaled Tags Per Million: 1593.8
FF:10175-103C4 60 years, female 2169.8
FF:10161-103A8 76 years, female 1017.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1343.4
Pig sample Sample description nTPM
Caudate
nTPM: 1211.1
Samples: 4

Max nTPM: 1438.0
Min nTPM: 1043.2
Sample A Female 1112.7
Sample B Female 1250.6
Sample C Male 1438.0
Sample D Male 1043.2
Putamen
nTPM: 1343.4
Samples: 4

Max nTPM: 1741.2
Min nTPM: 1070.0
Sample A Female 1231.8
Sample B Female 1070.0
Sample C Male 1741.2
Sample D Male 1330.5
Septum
nTPM: 1126.2
Samples: 4

Max nTPM: 1283.0
Min nTPM: 1056.3
Sample A Female 1283.0
Sample B Female 1056.3
Sample C Male 1076.9
Sample D Male 1088.6
Ventral pallidum
nTPM: 1147.3
Samples: 4

Max nTPM: 1175.7
Min nTPM: 1096.8
Sample A Female 1152.3
Sample B Female 1175.7
Sample C Male 1164.2
Sample D Male 1096.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1943.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1699.1
Samples: 4

Max nTPM: 1803.6
Min nTPM: 1639.7
Sample A Male 1708.6
Sample B Male 1639.7
Sample C Female 1644.6
Sample D Female 1803.6
Septum
nTPM: 1943.6
Samples: 4

Max nTPM: 2225.0
Min nTPM: 1734.3
Sample A Male 1734.3
Sample B Male 2225.0
Sample C Female 2005.4
Sample D Female 1809.7
Ventral forebrain
nTPM: 1619.6
Samples: 4

Max nTPM: 1885.3
Min nTPM: 1469.9
Sample A Male 1469.9
Sample B Male 1529.5
Sample C Female 1885.3
Sample D Female 1593.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.5
67792203 Antisense, RP_040920_01_D11, Mouse strain C57BL/6J (56 days, male) 18.5
Pallidum
Expression energy: 15.9
67792203 Antisense, RP_040920_01_D11, Mouse strain C57BL/6J (56 days, male) 15.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org