We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
941.7
nTPM
FANTOM5:
1768.3
Scaled Tags Per Million
Pig:
1296.9
nTPM
Allen mouse:
9.7
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
941.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 628.1
2301
Female, age 85, both hemispheres
706.8
2090
Male, age 80, both hemispheres
661.9
2188
Female, age 91, both hemispheres
605.2
1984
Male, age 76, both hemispheres
538.7
Dorsal cochlear nucleus nTPM: 640.6
2187
Female, age 91, both hemispheres
767.7
2058
Male, age 76, both hemispheres
640.3
2802
Male, age 74, right hemisphere
624.3
2370
Male, age 61, both hemispheres
599.5
2378
Male, age 80, both hemispheres
571.3
Dorsal tegmental nucleus nTPM: 814.3
2358
Male, age 61, both hemispheres
1122.8
2083
Male, age 80, both hemispheres
783.2
2326
Male, age 74, both hemispheres
729.4
1936
Male, age 76, left hemisphere
621.6
Dorsolateral tegmental area nTPM: 729.2
2337
Male, age 61, both hemispheres
980.3
2654
Male, age 80, both hemispheres
736.0
2751
Female, age 85, both hemispheres
672.1
2360
Male, age 74, both hemispheres
632.6
2141
Male, age 76, both hemispheres
625.1
Kolliker-Fuse nucleus nTPM: 753.3
2163
Male, age 80, both hemispheres
896.7
2315
Male, age 76, right hemisphere
770.9
2793
Female, age 91, left hemisphere
592.3
Lateral lemniscal nuclei nTPM: 625.7
2169
Male, age 76, both hemispheres
730.1
2746
Female, age 85, left hemisphere
638.1
2453
Male, age 74, right hemisphere
633.3
2036
Male, age 80, both hemispheres
598.9
2320
Female, age 91, left hemisphere
528.1
Lateral parabrachial nucleus nTPM: 609.8
2139
Female, age 85, right hemisphere
700.7
2013
Male, age 80, both hemispheres
642.5
2792
Male, age 76, both hemispheres
586.6
2790
Male, age 61, both hemispheres
509.5
Lateral vestibular nucleus nTPM: 772.6
2184
Male, age 76, both hemispheres
801.5
2311
Male, age 80, both hemispheres
743.7
Locus coeruleus nTPM: 941.7
2123
Female, age 91, both hemispheres
1198.6
2014
Male, age 55, unknown
1084.8
2720
Male, age 74, both hemispheres
952.2
1980
Male, age 76, both hemispheres
901.2
2162
Male, age 80, both hemispheres
884.8
2317
Female, age 72, unknown
882.7
2788
Male, age 74, unknown
687.7
Medial parabrachial nucleus nTPM: 698.0
2170
Female, age 91, both hemispheres
903.6
2156
Male, age 61, both hemispheres
713.2
2786
Male, age 76, both hemispheres
643.8
2854
Male, age 80, both hemispheres
640.6
2463
Female, age 85, right hemisphere
588.9
Medial periolivary nuclei nTPM: 673.2
2063
Male, age 76, both hemispheres
759.7
2171
Female, age 85, both hemispheres
759.7
2791
Male, age 74, right hemisphere
704.6
2081
Male, age 80, both hemispheres
612.5
2458
Female, age 91, both hemispheres
529.5
Motor facial nucleus nTPM: 657.1
2365
Male, age 74, right hemisphere
804.3
2062
Male, age 76, both hemispheres
786.4
2126
Male, age 61, both hemispheres
710.4
2697
Female, age 85, both hemispheres
579.4
2795
Female, age 91, both hemispheres
532.3
2327
Male, age 80, both hemispheres
529.9
Motor trigeminal nucleus nTPM: 649.5
2335
Male, age 61, both hemispheres
780.3
2560
Male, age 74, both hemispheres
667.9
2079
Male, age 80, both hemispheres
605.6
2309
Male, age 76, both hemispheres
600.6
2321
Female, age 91, both hemispheres
593.1
Nuclei of the trapezoid body nTPM: 669.0
1983
Male, age 76, both hemispheres
824.5
2159
Male, age 61, both hemispheres
733.2
2735
Female, age 85, both hemispheres
722.8
2166
Male, age 80, both hemispheres
585.0
2368
Female, age 91, both hemispheres
479.5
Nucleus raphe magnus nTPM: 690.4
2455
Male, age 74, both hemispheres
809.6
2160
Male, age 61, both hemispheres
771.3
2051
Male, age 76, both hemispheres
750.4
2172
Female, age 85, both hemispheres
745.8
2328
Male, age 80, both hemispheres
584.6
2459
Female, age 91, both hemispheres
480.3
Paramedian reticular nucleus nTPM: 720.0
2057
Male, age 80, both hemispheres
825.0
2313
Male, age 61, both hemispheres
820.6
2050
Female, age 85, both hemispheres
683.1
2052
Male, age 76, both hemispheres
551.0
Pedunculopontine tegmental nucleus nTPM: 756.0
2338
Male, age 61, both hemispheres
817.5
2334
Male, age 80, both hemispheres
816.8
1921
Female, age 85, both hemispheres
633.5
Pontine nuclei nTPM: 736.5
2787
Female, age 85, both hemispheres
856.5
2109
Female, age 72, unknown
826.9
1863
Male, age 55, unknown
813.2
1968
Male, age 76, left hemisphere
785.8
2454
Male, age 74, left hemisphere
691.2
2115
Male, age 80, left hemisphere
660.3
2727
Male, age 61, right hemisphere
648.4
2319
Female, age 91, both hemispheres
609.7
Pontine raphe nucleus nTPM: 653.9
2122
Female, age 85, midline
669.5
2853
Male, age 76, midline
638.3
Posteroventral cochlear nucleus nTPM: 633.9
2070
Male, age 76, both hemispheres
718.3
2752
Female, age 85, both hemispheres
657.5
2371
Male, age 61, both hemispheres
610.7
2341
Male, age 80, both hemispheres
608.5
2135
Female, age 91, both hemispheres
574.3
Principal sensory trigeminal nucleus nTPM: 657.0
2324
Male, age 76, both hemispheres
800.2
2158
Male, age 61, both hemispheres
677.2
2008
Male, age 80, left hemisphere
577.4
2367
Female, age 91, left hemisphere
573.3
Reticular pontine nucleus, caudal nTPM: 627.0
2559
Male, age 74, both hemispheres
734.4
2092
Male, age 76, both hemispheres
730.0
2332
Male, age 80, right hemisphere
547.5
2457
Female, age 91, both hemispheres
496.0
Reticular pontine nucleus, oral nTPM: 662.4
1939
Male, age 80, both hemispheres
761.2
2361
Male, age 74, both hemispheres
736.4
2167
Male, age 76, both hemispheres
696.1
2012
Female, age 85, both hemispheres
616.7
2366
Female, age 91, both hemispheres
501.5
Reticulotegmental nucleus nTPM: 681.4
2452
Male, age 74, both hemispheres
702.2
2325
Male, age 76, both hemispheres
689.3
2322
Female, age 91, both hemispheres
673.1
2333
Male, age 80, both hemispheres
660.8
Spinal trigeminal nucleus, oral nTPM: 708.3
2164
Male, age 80, both hemispheres
811.3
2737
Female, age 85, both hemispheres
685.9
1978
Male, age 76, both hemispheres
627.8
Subcoeruleus area nTPM: 674.5
2323
Female, age 91, left hemisphere
784.1
2451
Male, age 74, both hemispheres
681.0
1958
Male, age 80, both hemispheres
645.5
2369
Female, age 85, left hemisphere
641.4
2089
Male, age 76, left hemisphere
620.3
Superior olive nTPM: 624.3
2364
Male, age 74, right hemisphere
773.7
2020
Male, age 76, both hemispheres
632.7
1875
Female, age 85, both hemispheres
594.0
2561
Female, age 91, both hemispheres
561.0
2329
Male, age 80, right hemisphere
560.2
Ventral periolivary nuclei nTPM: 630.7
2130
Female, age 85, both hemispheres
762.2
2165
Male, age 80, both hemispheres
661.2
2023
Male, age 76, both hemispheres
609.6
2794
Female, age 91, left hemisphere
489.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 675.9
2359
Male, age 61, both hemispheres
853.1
2449
Male, age 74, both hemispheres
707.5
2840
Female, age 85, both hemispheres
666.1
1959
Male, age 76, both hemispheres
649.1
2161
Male, age 80, both hemispheres
643.8
2456
Female, age 91, both hemispheres
535.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1296.9
Pig sample
Sample description
nTPM
Pons nTPM: 1297.0
Samples: 4
Max nTPM: 1524.5
Min nTPM: 957.1
Sample A
Female
1524.5
Sample B
Female
957.1
Sample C
Male
1300.0
Sample D
Male
1406.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
