PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1002.0 nTPM
FANTOM5:1935.4 Scaled Tags Per Million
Pig:1316.9 nTPM
Mouse:1008.1 nTPM
Allen mouse:9.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1002.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 628.1
2301 Female, age 85, both hemispheres 706.8
2090 Male, age 80, both hemispheres 661.9
2188 Female, age 91, both hemispheres 605.2
1984 Male, age 76, both hemispheres 538.7
Area postrema
nTPM: 756.8
2799 Male, age 61, both hemispheres 1012.2
2306 Male, age 80, both hemispheres 669.3
2054 Male, age 76, both hemispheres 589.1
Dorsal cochlear nucleus
nTPM: 640.6
2187 Female, age 91, both hemispheres 767.7
2058 Male, age 76, both hemispheres 640.3
2802 Male, age 74, right hemisphere 624.3
2370 Male, age 61, both hemispheres 599.5
2378 Male, age 80, both hemispheres 571.3
Dorsal medullary reticular nucleus
nTPM: 663.1
2040 Female, age 85, both hemispheres 801.9
2088 Male, age 76, both hemispheres 593.8
2373 Male, age 61, both hemispheres 593.6
Dorsal motor vagal complex
nTPM: 698.9
2133 Female, age 91, both hemispheres 851.0
2000 Male, age 74, unknown 799.4
2844 Male, age 55, unknown 783.4
2185 Male, age 76, both hemispheres 735.7
2813 Female, age 72, unknown 733.8
2643 Male, age 74, both hemispheres 671.0
2797 Male, age 61, both hemispheres 552.6
2807 Female, age 85, both hemispheres 464.2
Dorsal tegmental nucleus
nTPM: 814.3
2358 Male, age 61, both hemispheres 1122.8
2083 Male, age 80, both hemispheres 783.2
2326 Male, age 74, both hemispheres 729.4
1936 Male, age 76, left hemisphere 621.6
Dorsolateral tegmental area
nTPM: 729.2
2337 Male, age 61, both hemispheres 980.3
2654 Male, age 80, both hemispheres 736.0
2751 Female, age 85, both hemispheres 672.1
2360 Male, age 74, both hemispheres 632.6
2141 Male, age 76, both hemispheres 625.1
Gigantocellular reticular nuclei, medullary
nTPM: 653.0
2314 Male, age 61, both hemispheres 821.0
2462 Male, age 74, both hemispheres 769.9
2310 Male, age 80, both hemispheres 622.0
1876 Female, age 85, both hemispheres 608.6
2022 Male, age 76, right hemisphere 562.9
2387 Female, age 91, both hemispheres 533.9
Gigantocellular reticular nuclei, pars
nTPM: 672.4
2336 Male, age 61, both hemispheres 757.9
2084 Female, age 85, both hemispheres 746.3
2168 Male, age 76, both hemispheres 737.0
2330 Male, age 80, both hemispheres 583.5
2706 Male, age 80, both hemispheres 537.3
Inferior olive
nTPM: 822.0
2563 Male, age 74, both hemispheres 1013.4
2178 Male, age 61, both hemispheres 874.8
2085 Female, age 85, both hemispheres 872.8
2628 Female, age 91, both hemispheres 722.4
2379 Male, age 80, both hemispheres 626.5
Kolliker-Fuse nucleus
nTPM: 753.3
2163 Male, age 80, both hemispheres 896.7
2315 Male, age 76, right hemisphere 770.9
2793 Female, age 91, left hemisphere 592.3
Lateral lemniscal nuclei
nTPM: 625.7
2169 Male, age 76, both hemispheres 730.1
2746 Female, age 85, left hemisphere 638.1
2453 Male, age 74, right hemisphere 633.3
2036 Male, age 80, both hemispheres 598.9
2320 Female, age 91, left hemisphere 528.1
Lateral medullary reticular nucleus
nTPM: 828.4
2305 Male, age 74, both hemispheres 1220.6
2374 Male, age 61, both hemispheres 811.4
2852 Male, age 80, both hemispheres 743.2
2190 Female, age 85, both hemispheres 741.6
2044 Male, age 76, both hemispheres 740.6
2804 Female, age 91, both hemispheres 712.8
Lateral parabrachial nucleus
nTPM: 609.8
2139 Female, age 85, right hemisphere 700.7
2013 Male, age 80, both hemispheres 642.5
2792 Male, age 76, both hemispheres 586.6
2790 Male, age 61, both hemispheres 509.5
Lateral vestibular nucleus
nTPM: 772.6
2184 Male, age 76, both hemispheres 801.5
2311 Male, age 80, both hemispheres 743.7
Locus coeruleus
nTPM: 941.7
2123 Female, age 91, both hemispheres 1198.6
2014 Male, age 55, unknown 1084.8
2720 Male, age 74, both hemispheres 952.2
1980 Male, age 76, both hemispheres 901.2
2162 Male, age 80, both hemispheres 884.8
2317 Female, age 72, unknown 882.7
2788 Male, age 74, unknown 687.7
Medial olivary nucleus
nTPM: 806.6
1943 Male, age 61, both hemispheres 909.2
2138 Female, age 91, both hemispheres 838.7
1962 Male, age 76, both hemispheres 782.0
2851 Male, age 80, both hemispheres 696.5
Medial parabrachial nucleus
nTPM: 698.0
2170 Female, age 91, both hemispheres 903.6
2156 Male, age 61, both hemispheres 713.2
2786 Male, age 76, both hemispheres 643.8
2854 Male, age 80, both hemispheres 640.6
2463 Female, age 85, right hemisphere 588.9
Medial periolivary nuclei
nTPM: 673.2
2063 Male, age 76, both hemispheres 759.7
2171 Female, age 85, both hemispheres 759.7
2791 Male, age 74, right hemisphere 704.6
2081 Male, age 80, both hemispheres 612.5
2458 Female, age 91, both hemispheres 529.5
Medial vestibular nucleus
nTPM: 792.9
2801 Male, age 74, both hemispheres 947.6
2624 Male, age 61, both hemispheres 935.6
2134 Male, age 76, both hemispheres 827.6
2743 Female, age 85, both hemispheres 734.6
2093 Male, age 80, both hemispheres 689.8
2803 Female, age 91, both hemispheres 622.3
Motor facial nucleus
nTPM: 657.1
2365 Male, age 74, right hemisphere 804.3
2062 Male, age 76, both hemispheres 786.4
2126 Male, age 61, both hemispheres 710.4
2697 Female, age 85, both hemispheres 579.4
2795 Female, age 91, both hemispheres 532.3
2327 Male, age 80, both hemispheres 529.9
Motor hypoglossal nucleus
nTPM: 812.1
2461 Male, age 61, both hemispheres 1014.7
2125 Female, age 91, both hemispheres 837.8
2182 Male, age 80, both hemispheres 816.2
2132 Female, age 85, both hemispheres 743.1
2277 Male, age 76, both hemispheres 648.9
Motor trigeminal nucleus
nTPM: 649.5
2335 Male, age 61, both hemispheres 780.3
2560 Male, age 74, both hemispheres 667.9
2079 Male, age 80, both hemispheres 605.6
2309 Male, age 76, both hemispheres 600.6
2321 Female, age 91, both hemispheres 593.1
Nuclei of the trapezoid body
nTPM: 669.0
1983 Male, age 76, both hemispheres 824.5
2159 Male, age 61, both hemispheres 733.2
2735 Female, age 85, both hemispheres 722.8
2166 Male, age 80, both hemispheres 585.0
2368 Female, age 91, both hemispheres 479.5
Nucleus ambiguus
nTPM: 769.8
2071 Male, age 76, both hemispheres 780.0
2096 Female, age 85, both hemispheres 759.7
Nucleus cuneatus
nTPM: 626.1
2564 Male, age 74, both hemispheres 801.9
2131 Male, age 76, both hemispheres 712.2
2100 Male, age 76, both hemispheres 691.5
2808 Female, age 85, both hemispheres 662.7
2562 Male, age 61, both hemispheres 604.9
2380 Male, age 80, both hemispheres 587.7
2376 Male, age 61, both hemispheres 571.6
2381 Male, age 80, both hemispheres 519.8
2805 Female, age 91, both hemispheres 482.9
Nucleus gracilis
nTPM: 695.8
2627 Male, age 74, both hemispheres 929.6
2299 Female, age 85, both hemispheres 599.5
2382 Male, age 80, both hemispheres 558.4
Nucleus raphe magnus
nTPM: 690.4
2455 Male, age 74, both hemispheres 809.6
2160 Male, age 61, both hemispheres 771.3
2051 Male, age 76, both hemispheres 750.4
2172 Female, age 85, both hemispheres 745.8
2328 Male, age 80, both hemispheres 584.6
2459 Female, age 91, both hemispheres 480.3
Nucleus raphe obscurus
nTPM: 704.8
2142 Male, age 76, midline 712.8
2800 Male, age 61, midline 707.1
2845 Female, age 85, midline 694.6
Nucleus raphe pallidus
nTPM: 1002.0
1924 Male, age 61, midline 1296.5
2183 Male, age 80, midline 1005.0
2145 Male, age 76, midline 704.4
Nucleus tractus solitarii
nTPM: 615.3
2191 Female, age 85, both hemispheres 674.0
2656 Male, age 76, both hemispheres 617.3
2144 Female, age 91, right hemisphere 588.8
2307 Male, age 80, both hemispheres 580.9
Paramedian reticular nucleus
nTPM: 720.0
2057 Male, age 80, both hemispheres 825.0
2313 Male, age 61, both hemispheres 820.6
2050 Female, age 85, both hemispheres 683.1
2052 Male, age 76, both hemispheres 551.0
Parvicellular reticular nuclei
nTPM: 715.5
2119 Male, age 80, both hemispheres 870.3
2095 Male, age 76, both hemispheres 686.9
2558 Male, age 74, both hemispheres 589.2
Parvicellular reticular nuclei, medullary
nTPM: 771.6
2189 Female, age 91, both hemispheres 832.9
2091 Female, age 85, both hemispheres 803.1
2181 Male, age 80, left hemisphere 678.7
Pedunculopontine tegmental nucleus
nTPM: 756.0
2338 Male, age 61, both hemispheres 817.5
2334 Male, age 80, both hemispheres 816.8
1921 Female, age 85, both hemispheres 633.5
Peritrigeminal nucleus
nTPM: 834.7
2067 Female, age 85, both hemispheres 896.7
2179 Male, age 61, both hemispheres 821.6
2136 Male, age 76, both hemispheres 785.9
Pontine nuclei
nTPM: 736.5
2787 Female, age 85, both hemispheres 856.5
2109 Female, age 72, unknown 826.9
1863 Male, age 55, unknown 813.2
1968 Male, age 76, left hemisphere 785.8
2454 Male, age 74, left hemisphere 691.2
2115 Male, age 80, left hemisphere 660.3
2727 Male, age 61, right hemisphere 648.4
2319 Female, age 91, both hemispheres 609.7
Pontine raphe nucleus
nTPM: 653.9
2122 Female, age 85, midline 669.5
2853 Male, age 76, midline 638.3
Posteroventral cochlear nucleus
nTPM: 633.9
2070 Male, age 76, both hemispheres 718.3
2752 Female, age 85, both hemispheres 657.5
2371 Male, age 61, both hemispheres 610.7
2341 Male, age 80, both hemispheres 608.5
2135 Female, age 91, both hemispheres 574.3
Prepositus hypoglossal nucleus
nTPM: 739.9
2855 Female, age 85, right hemisphere 751.4
2086 Male, age 80, both hemispheres 728.4
Principal sensory trigeminal nucleus
nTPM: 657.0
2324 Male, age 76, both hemispheres 800.2
2158 Male, age 61, both hemispheres 677.2
2008 Male, age 80, left hemisphere 577.4
2367 Female, age 91, left hemisphere 573.3
Reticular pontine nucleus, caudal
nTPM: 627.0
2559 Male, age 74, both hemispheres 734.4
2092 Male, age 76, both hemispheres 730.0
2332 Male, age 80, right hemisphere 547.5
2457 Female, age 91, both hemispheres 496.0
Reticular pontine nucleus, oral
nTPM: 662.4
1939 Male, age 80, both hemispheres 761.2
2361 Male, age 74, both hemispheres 736.4
2167 Male, age 76, both hemispheres 696.1
2012 Female, age 85, both hemispheres 616.7
2366 Female, age 91, both hemispheres 501.5
Reticulotegmental nucleus
nTPM: 681.4
2452 Male, age 74, both hemispheres 702.2
2325 Male, age 76, both hemispheres 689.3
2322 Female, age 91, both hemispheres 673.1
2333 Male, age 80, both hemispheres 660.8
Spinal trigeminal nucleus, caudal
nTPM: 734.4
2390 Female, age 91, both hemispheres 882.6
2447 Male, age 76, both hemispheres 745.9
2312 Male, age 61, both hemispheres 696.8
2642 Male, age 74, both hemispheres 686.7
2308 Male, age 80, both hemispheres 660.1
Spinal trigeminal nucleus, interpolar
nTPM: 808.9
2625 Male, age 61, both hemispheres 1382.4
2066 Male, age 76, right hemisphere 809.8
2033 Male, age 80, both hemispheres 738.0
2389 Female, age 91, both hemispheres 566.5
2386 Female, age 85, both hemispheres 547.8
Spinal trigeminal nucleus, oral
nTPM: 708.3
2164 Male, age 80, both hemispheres 811.3
2737 Female, age 85, both hemispheres 685.9
1978 Male, age 76, both hemispheres 627.8
Spinal vestibular nucleus
nTPM: 691.4
2748 Male, age 76, both hemispheres 762.2
2780 Male, age 80, both hemispheres 755.1
2186 Female, age 91, both hemispheres 720.0
2796 Male, age 61, both hemispheres 665.8
2806 Female, age 85, both hemispheres 629.6
2384 Male, age 74, both hemispheres 615.7
Subcoeruleus area
nTPM: 674.5
2323 Female, age 91, left hemisphere 784.1
2451 Male, age 74, both hemispheres 681.0
1958 Male, age 80, both hemispheres 645.5
2369 Female, age 85, left hemisphere 641.4
2089 Male, age 76, left hemisphere 620.3
Superior olive
nTPM: 624.3
2364 Male, age 74, right hemisphere 773.7
2020 Male, age 76, both hemispheres 632.7
1875 Female, age 85, both hemispheres 594.0
2561 Female, age 91, both hemispheres 561.0
2329 Male, age 80, right hemisphere 560.2
Superior vestibular nucleus
nTPM: 740.3
2383 Male, age 74, both hemispheres 767.0
2015 Male, age 80, both hemispheres 744.7
2061 Male, age 76, both hemispheres 709.2
Ventral medullary reticular nucleus
nTPM: 644.7
2060 Male, age 76, both hemispheres 675.0
2372 Male, age 61, both hemispheres 614.4
Ventral periolivary nuclei
nTPM: 630.7
2130 Female, age 85, both hemispheres 762.2
2165 Male, age 80, both hemispheres 661.2
2023 Male, age 76, both hemispheres 609.6
2794 Female, age 91, left hemisphere 489.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 766.8
2180 Male, age 61, both hemispheres 862.9
2741 Female, age 85, both hemispheres 804.8
1986 Male, age 76, both hemispheres 779.4
2302 Female, age 91, both hemispheres 734.0
2118 Male, age 80, both hemispheres 652.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 675.9
2359 Male, age 61, both hemispheres 853.1
2449 Male, age 74, both hemispheres 707.5
2840 Female, age 85, both hemispheres 666.1
1959 Male, age 76, both hemispheres 649.1
2161 Male, age 80, both hemispheres 643.8
2456 Female, age 91, both hemispheres 535.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1935.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1768.3
FF:10182-103D2 60 years, female 2316.1
FF:10165-103B3 76 years, female 1220.6
Medulla oblongata
Scaled Tags Per Million: 1935.4
FF:10038-101F2 18-64 years, mixed 2396.1
FF:10174-103C3 60 years, female 2249.4
FF:10155-103A2 76 years, female 1160.7
Pons
Scaled Tags Per Million: 1768.0
FF:10033-101E6 18-54 years, mixed 1768.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1316.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1316.9
Samples: 4

Max nTPM: 1423.2
Min nTPM: 1108.3
Sample A Female 1326.7
Sample B Female 1108.3
Sample C Male 1409.3
Sample D Male 1423.2
Pons
nTPM: 1297.0
Samples: 4

Max nTPM: 1524.5
Min nTPM: 957.1
Sample A Female 1524.5
Sample B Female 957.1
Sample C Male 1300.0
Sample D Male 1406.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1008.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1008.1
Samples: 4

Max nTPM: 1049.7
Min nTPM: 947.2
Sample A Male 1049.7
Sample B Male 947.2
Sample C Female 1035.8
Sample D Female 999.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.4
67792203 Antisense, RP_040920_01_D11, Mouse strain C57BL/6J (56 days, male) 8.4
Pons
Expression energy: 9.7
67792203 Antisense, RP_040920_01_D11, Mouse strain C57BL/6J (56 days, male) 9.7

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