We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CLDN5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CLDN5
TISSUE PRIMARY DATA BREAST Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Breast
Tissue proteome
Breast
BREAST - Expression summary
Protein expression
Breasti

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Adipocytes: Not detected
Glandular cells: Medium
Myoepithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:407.2 nTPM
HPA:8.2 nTPM
GTEx:407.2 nTPM
FANTOM5:258.9 Scaled Tags Per Million

BREAST - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB002607
Adipocytes Not detected
Glandular cells Medium
Myoepithelial cells Low



BREAST - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.2
overview
Female, age 52
Breast sample 373
nTPM: 10.2
Cell types%
Glandular cells:
15

Adipocytes:
5

Other cell types:
80

overview
Female, age 80
Breast sample 390
nTPM: 17.9
Cell types%
Glandular cells:
5

Adipocytes:
15

Other cell types:
80

overview
Female, age 47
Breast sample 405
nTPM: 3
Cell types%
Glandular cells:
5

Adipocytes:
5

Other cell types:
90

overview
Female, age 38
Breast sample 410
nTPM: 1.9
Cell types%
Glandular cells:
40

Adipocytes:
5

Other cell types:
55


BREAST - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

407.2
GTEx sample id Sample description nTPM
Breast - Mammary Tissue
Average nTPM: 407.2
Samples: 459

Max nTPM: 2077.8
Min nTPM: 27.7
Std nTPM: 294.5
Median nTPM: 321.6
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 2077.8
GTEX-14E6C-1326-SM-62LEQ 40-49 years, male 1737.9
GTEX-14753-2426-SM-5LU8U 60-69 years, male 1514.4
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 1509.0
GTEX-15RJE-2626-SM-7KFT1 40-49 years, male 1429.3
GTEX-13SLW-2526-SM-62LDQ 70-79 years, male 1375.3
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 1302.8
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 1296.2
GTEX-1RLM8-2226-SM-EVYD1 50-59 years, male 1221.7
GTEX-1HCU8-0126-SM-ADEHH 60-69 years, female 1192.9
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 1186.8
GTEX-1JN6P-2426-SM-ARL99 60-69 years, male 1182.6
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 1172.4
GTEX-17MF6-0326-SM-7EPH5 40-49 years, male 1151.7
GTEX-1H1ZS-0126-SM-9YFKQ 70-79 years, male 1129.4
GTEX-1H1DG-0526-SM-9YFLN 70-79 years, male 1127.9
GTEX-1QMI2-0726-SM-E9J4F 60-69 years, male 1126.2
GTEX-1PPH7-0826-SM-E8VNX 40-49 years, male 1104.2
GTEX-1A3MX-2726-SM-718B6 60-69 years, male 1091.7
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 1085.1
GTEX-1ICLY-1726-SM-B2LVT 50-59 years, male 1038.2
GTEX-1F75B-0626-SM-7SB8A 50-59 years, male 996.5
GTEX-REY6-2426-SM-48FF5 60-69 years, male 990.7
GTEX-17F9E-2526-SM-7MGW2 50-59 years, male 987.1
GTEX-1MA7X-1626-SM-E9U5B 60-69 years, male 981.8
GTEX-1HR98-0426-SM-COH36 60-69 years, male 973.5
GTEX-1IOXB-1926-SM-ARL8E 50-59 years, male 969.7
GTEX-1ICLZ-0426-SM-B2LW2 60-69 years, male 960.3
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 953.7
GTEX-1JMLX-2026-SM-CMKGN 50-59 years, male 948.5
GTEX-1JJEA-2726-SM-ARL8V 60-69 years, male 928.1
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 924.1
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 919.9
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 917.3
GTEX-14PN4-0626-SM-62LFP 50-59 years, male 912.6
GTEX-1PPGY-1526-SM-EVYBK 60-69 years, male 908.7
GTEX-1MJK3-1126-SM-E9J3F 20-29 years, male 902.2
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 901.6
GTEX-1N2EF-2226-SM-E9J33 60-69 years, male 897.9
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 896.1
GTEX-1C6WA-2426-SM-7SB86 60-69 years, male 894.5
GTEX-1H23P-0726-SM-9WG7K 60-69 years, male 893.6
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 878.2
GTEX-1KD4Q-2326-SM-D4P3M 40-49 years, male 864.1
GTEX-1IDJH-2226-SM-E6CJV 70-79 years, male 834.7
GTEX-1C6VS-0726-SM-7EPHF 60-69 years, male 832.9
GTEX-ZLFU-2126-SM-DO931 40-49 years, male 803.2
GTEX-1EKGG-2626-SM-7IGPY 60-69 years, male 784.2
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 781.9
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 776.0
GTEX-X261-0626-SM-3NMD9 50-59 years, male 765.6
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 764.9
GTEX-13VXU-2826-SM-664MA 50-59 years, male 756.2
GTEX-1R46S-2526-SM-E8VN2 60-69 years, female 753.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 750.5
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 741.4
GTEX-1KAFJ-0226-SM-DIPEL 50-59 years, male 739.2
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 738.9
GTEX-1J8Q2-2726-SM-A9G2X 60-69 years, male 735.7
GTEX-1HBPM-0126-SM-ARL9E 60-69 years, female 734.6
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 729.8
GTEX-17F97-2526-SM-7EWDV 50-59 years, male 727.9
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 726.6
GTEX-183WM-0726-SM-7LTAA 70-79 years, female 725.8
GTEX-14E7W-0826-SM-62LEJ 70-79 years, male 716.3
GTEX-1HUB1-1626-SM-CM2SL 60-69 years, male 713.8
GTEX-1E2YA-2726-SM-7IGPW 50-59 years, male 669.0
GTEX-1H3VY-0926-SM-ACKXE 50-59 years, male 665.2
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 662.9
GTEX-1AX9J-1126-SM-731B7 60-69 years, male 662.1
GTEX-1NV8Z-2826-SM-E8VME 60-69 years, male 659.4
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 657.4
GTEX-117XS-1926-SM-5GICO 60-69 years, male 657.1
GTEX-1IDFM-0426-SM-B2LVV 60-69 years, male 655.2
GTEX-145MF-2226-SM-7EPIR 50-59 years, male 651.3
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 645.4
GTEX-1JMOU-2026-SM-CMKGU 60-69 years, female 633.7
GTEX-1EU9M-2826-SM-7EWFH 60-69 years, male 622.5
GTEX-1I1GU-1026-SM-ADEHJ 40-49 years, male 620.4
GTEX-1N2EE-2126-SM-E8VNN 60-69 years, male 620.1
GTEX-13113-5013-SM-7SB7G 60-69 years, female 619.5
GTEX-1RAZS-1226-SM-E8VMT 50-59 years, male 615.3
GTEX-1HFI7-0126-SM-CGQFQ 50-59 years, female 612.2
GTEX-1M4P7-2626-SM-E9U5F 60-69 years, male 611.4
GTEX-17EUY-1926-SM-7DUF6 20-29 years, male 611.1
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 608.7
GTEX-1N5O9-1126-SM-DTXEQ 60-69 years, male 604.3
GTEX-1LC47-1226-SM-D4P44 60-69 years, male 603.0
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 600.8
GTEX-1HCU7-1026-SM-ADEIP 50-59 years, male 600.2
GTEX-1B8KE-1226-SM-73KWK 50-59 years, male 592.9
GTEX-1IDJF-2326-SM-ARL86 20-29 years, male 590.8
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 589.7
GTEX-14PKU-0426-SM-6EU1P 40-49 years, female 589.1
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 584.3
GTEX-1AX9I-0726-SM-73KWV 60-69 years, male 575.6
GTEX-1A8G7-2426-SM-731AK 60-69 years, male 573.1
GTEX-1BAJH-0826-SM-7EWEF 70-79 years, male 570.3
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 570.3
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 567.3
GTEX-14B4R-1226-SM-5TDDT 30-39 years, male 560.4
GTEX-1GN2E-2226-SM-9WG6J 60-69 years, male 557.0
GTEX-14PJO-0726-SM-69LO8 60-69 years, male 555.3
GTEX-1I1GP-0426-SM-COH3N 50-59 years, male 549.5
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 548.4
GTEX-ZF3C-2326-SM-5S2NC 50-59 years, female 546.2
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 545.8
GTEX-1JJE9-2326-SM-ARL8Q 70-79 years, male 541.0
GTEX-18A7B-2626-SM-7LG55 70-79 years, male 540.5
GTEX-1HT8W-2226-SM-CGQEC 30-39 years, male 538.4
GTEX-YECK-0726-SM-EZ6LV 60-69 years, male 535.1
GTEX-15UF6-0126-SM-6PAMB 70-79 years, female 531.3
GTEX-1I1GV-2426-SM-CGQFM 60-69 years, male 523.5
GTEX-17F96-2426-SM-7IGLN 70-79 years, male 518.4
GTEX-1HSEH-2026-SM-ADEHN 60-69 years, male 516.9
GTEX-1K9T9-1426-SM-DIPFQ 50-59 years, female 516.5
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 514.5
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 511.0
GTEX-1QPFJ-2026-SM-EVYBE 30-39 years, female 509.2
GTEX-17EVP-0226-SM-79OND 40-49 years, male 509.0
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 507.1
GTEX-169BO-1126-SM-7MGWN 50-59 years, male 505.5
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 503.5
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 501.2
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 499.6
GTEX-14DAR-1326-SM-7DUEG 50-59 years, male 493.6
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 491.2
GTEX-1GMR3-2626-SM-7RHHG 40-49 years, male 488.6
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 486.9
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 486.9
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 485.1
GTEX-144GM-0926-SM-5O994 20-29 years, male 482.6
GTEX-1KD5A-1926-SM-DKPQA 50-59 years, male 477.9
GTEX-18D9A-1526-SM-7LG4J 30-39 years, female 476.2
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 475.4
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 471.5
GTEX-1I6K6-0826-SM-ARL7Z 30-39 years, male 469.5
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 466.3
GTEX-1GF9V-2526-SM-7SB8K 60-69 years, male 465.0
GTEX-1H4P4-2226-SM-9MQKQ 50-59 years, male 452.7
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 450.9
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 449.2
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 446.4
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 445.7
GTEX-1GMRU-0826-SM-9WYT7 50-59 years, male 444.2
GTEX-16YQH-2826-SM-6PAMY 30-39 years, male 439.4
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 438.1
GTEX-15UF7-0726-SM-6M46D 40-49 years, male 437.9
GTEX-13PVR-2226-SM-7DHKP 60-69 years, female 437.3
GTEX-1F5PK-2126-SM-7PC28 50-59 years, male 437.0
GTEX-ZLWG-1926-SM-DO92J 50-59 years, female 435.0
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 433.5
GTEX-1C64O-0726-SM-7DUFU 60-69 years, male 428.3
GTEX-1HSMO-0826-SM-ADEIV 60-69 years, male 425.8
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 424.9
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 424.2
GTEX-1LBAC-0926-SM-CXKY9 20-29 years, male 423.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 422.3
GTEX-1QEPI-0926-SM-DTXF3 60-69 years, female 421.9
GTEX-1LSVX-2426-SM-E6CJX 60-69 years, male 421.3
GTEX-1IE54-0626-SM-ARL8D 40-49 years, female 420.2
GTEX-1P4AB-1826-SM-E76PU 50-59 years, male 419.3
GTEX-1R9JW-0326-SM-EAZ45 30-39 years, female 416.4
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 413.7
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 412.9
GTEX-1IKJJ-2326-SM-COH3U 60-69 years, male 412.1
GTEX-1NHNU-0926-SM-E9J2T 50-59 years, male 411.3
GTEX-1JMPZ-1626-SM-COH31 30-39 years, male 411.1
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 410.2
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 408.1
GTEX-X62O-0526-SM-EWRMA 50-59 years, male 405.1
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 405.0
GTEX-17HGU-1326-SM-79OKB 50-59 years, male 404.7
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 403.1
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 402.7
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 400.6
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 399.2
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 395.5
GTEX-15G19-2126-SM-6M48J 60-69 years, male 395.4
GTEX-1EN7A-1426-SM-7PBY4 40-49 years, male 393.2
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 392.0
GTEX-1AX8Z-0926-SM-731AW 60-69 years, male 390.5
GTEX-1KXAM-1026-SM-CY8IA 60-69 years, male 388.9
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 387.9
GTEX-17EVQ-0426-SM-7LG57 70-79 years, male 387.1
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 385.8
GTEX-1R7EU-1226-SM-E8VMR 60-69 years, male 385.4
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 383.0
GTEX-1CB4G-2326-SM-79OOI 60-69 years, male 377.7
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 377.2
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 376.0
GTEX-111YS-1926-SM-5GICC 60-69 years, male 375.9
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 375.6
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 371.1
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 369.8
GTEX-1CAMR-1426-SM-793BO 20-29 years, male 368.9
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 366.3
GTEX-1GF9U-1726-SM-7MGY5 40-49 years, female 365.4
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 363.0
GTEX-14LLW-0626-SM-62LFC 70-79 years, female 361.2
GTEX-17MFQ-0926-SM-7LG4S 20-29 years, male 360.6
GTEX-1B8SG-1226-SM-7IGPF 50-59 years, male 360.3
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 360.2
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 353.1
GTEX-1JMPY-0526-SM-CL54O 30-39 years, male 352.8
GTEX-1LSNL-2826-SM-E9U5L 50-59 years, male 352.2
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 351.7
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 351.7
GTEX-1OKEX-0826-SM-E9J2B 60-69 years, male 351.0
GTEX-11EI6-0626-SM-5985T 60-69 years, male 350.9
GTEX-1QP9N-1826-SM-E8VMP 30-39 years, male 349.2
GTEX-Z9EW-1526-SM-EZ6LU 40-49 years, male 347.4
GTEX-1GPI6-0626-SM-7RHHJ 60-69 years, male 345.8
GTEX-1C475-1226-SM-7SB72 40-49 years, female 345.4
GTEX-1A3MV-1626-SM-731C1 30-39 years, male 344.7
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 344.0
GTEX-1GMR2-1926-SM-9MQLZ 50-59 years, male 340.9
GTEX-1B8KZ-1526-SM-7DUG7 50-59 years, male 340.5
GTEX-1QP29-1726-SM-E8VMQ 50-59 years, male 340.4
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 338.6
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 338.4
GTEX-1C6VQ-0426-SM-79OOX 50-59 years, male 337.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 335.5
GTEX-1JMQK-2626-SM-COH2W 60-69 years, male 334.5
GTEX-15SHW-1326-SM-6PAL8 60-69 years, male 333.2
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 332.0
GTEX-1JK1U-1826-SM-ARL8W 60-69 years, male 331.9
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 330.1
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 321.8
GTEX-18465-2026-SM-718AP 50-59 years, male 321.6
GTEX-1GZ4I-2826-SM-9MQK5 50-59 years, male 321.4
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 321.1
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 320.8
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 319.2
GTEX-1I1HK-2426-SM-ADEHX 60-69 years, male 317.3
GTEX-16BQI-1026-SM-7KUEA 30-39 years, female 317.1
GTEX-1192X-2326-SM-5987X 50-59 years, male 316.9
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 315.1
GTEX-1QP28-1226-SM-E9J2M 50-59 years, female 314.1
GTEX-1LNCM-0226-SM-DIPF4 50-59 years, female 313.7
GTEX-1HC8U-0826-SM-ADEIL 40-49 years, female 312.2
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 311.9
GTEX-1R9PN-0326-SM-DTX85 40-49 years, female 311.4
GTEX-1J8EW-2626-SM-CL53E 60-69 years, female 310.4
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 307.0
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 305.9
GTEX-R53T-1526-SM-48FEK 50-59 years, female 305.8
GTEX-11OF3-1926-SM-59889 60-69 years, male 303.6
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 303.5
GTEX-1MJK2-2226-SM-EVYCR 50-59 years, male 301.5
GTEX-14PHY-1926-SM-5YY95 60-69 years, female 301.2
GTEX-17GQL-0326-SM-7LG5U 60-69 years, male 301.0
GTEX-1S82U-1126-SM-E9U6I 30-39 years, female 299.8
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 299.5
GTEX-ZAK1-1326-SM-EVYAS 50-59 years, female 299.1
GTEX-1R9PM-1826-SM-EVYBH 20-29 years, male 298.4
GTEX-14ICK-2426-SM-6EU27 40-49 years, male 297.2
GTEX-1CB4J-1826-SM-7EWF9 60-69 years, male 296.4
GTEX-QMRM-1626-SM-D4P1U 50-59 years, male 296.0
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 295.3
GTEX-1122O-1226-SM-5H113 60-69 years, female 295.2
GTEX-ZDTT-2126-SM-DKPOM 60-69 years, male 294.1
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 293.5
GTEX-183FY-1126-SM-7DHLJ 20-29 years, male 291.8
GTEX-14A5I-0726-SM-5TDEB 50-59 years, female 288.6
GTEX-1B8L1-2426-SM-9WYTE 60-69 years, male 288.2
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 285.9
GTEX-1IGQW-0926-SM-ADEH6 60-69 years, male 284.0
GTEX-R55D-0826-SM-48FEA 50-59 years, male 281.6
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 279.5
GTEX-1F5PL-1026-SM-7RHI1 40-49 years, female 278.5
GTEX-17HHY-0926-SM-793C1 50-59 years, male 277.6
GTEX-1I19N-2826-SM-CL55D 70-79 years, male 276.0
GTEX-17F98-0526-SM-79OK5 40-49 years, female 275.1
GTEX-1EWIQ-1726-SM-7SB7T 70-79 years, female 273.0
GTEX-1HCVE-2626-SM-ADEJ8 50-59 years, male 273.0
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 271.3
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 269.8
GTEX-1CB4E-0226-SM-79OLW 60-69 years, male 268.3
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 267.0
GTEX-18A7A-0726-SM-7LTAI 50-59 years, female 265.4
GTEX-1B97I-0426-SM-79OL7 40-49 years, male 265.4
GTEX-WHSB-1926-SM-EXOHH 50-59 years, male 264.7
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 262.9
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 262.5
GTEX-18QFQ-0826-SM-718AX 30-39 years, male 261.3
GTEX-17HHE-1426-SM-7EPH4 50-59 years, male 261.2
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 260.0
GTEX-17JCI-0726-SM-7EPH1 60-69 years, female 259.1
GTEX-1JN1M-3026-SM-CMKGK 60-69 years, female 258.6
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 257.9
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 257.8
GTEX-1I4MK-1626-SM-CM2TJ 50-59 years, female 257.2
GTEX-18A6Q-0926-SM-7LG4N 60-69 years, male 257.0
GTEX-1IKOE-1326-SM-CE6T6 30-39 years, female 254.4
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 252.8
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 252.4
GTEX-1F75I-2026-SM-7SB7N 40-49 years, male 251.3
GTEX-14PJ4-2126-SM-6ETZJ 60-69 years, male 250.6
GTEX-1QW4Y-1026-SM-DTXE2 30-39 years, male 250.1
GTEX-1GPI7-0926-SM-7PC3J 20-29 years, male 248.9
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 248.4
GTEX-QVJO-1826-SM-447C9 60-69 years, female 248.0
GTEX-XBED-1626-SM-47JYN 60-69 years, male 245.8
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 244.0
GTEX-1I1GT-1126-SM-ARL7J 60-69 years, female 243.5
GTEX-17KNJ-2026-SM-7LG53 50-59 years, male 242.0
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 242.0
GTEX-1KANC-1426-SM-CYPT9 50-59 years, female 240.6
GTEX-WFG8-2026-SM-EXOHO 20-29 years, male 240.1
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 239.7
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 239.1
GTEX-18A66-1726-SM-7LG5N 60-69 years, male 238.9
GTEX-15ETS-0626-SM-7KUMX 40-49 years, female 238.0
GTEX-1HR9M-2426-SM-ACKXI 60-69 years, male 230.6
GTEX-ZLV1-1426-SM-DO92Z 60-69 years, female 230.1
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 228.3
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 228.3
GTEX-QEL4-2126-SM-447AE 50-59 years, male 227.0
GTEX-15EOM-5019-SM-793DK 20-29 years, female 226.0
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 225.6
GTEX-1B933-2526-SM-7IGO5 50-59 years, female 224.7
GTEX-1IDJU-1826-SM-CMKHV 60-69 years, female 223.5
GTEX-1GZ2Q-2626-SM-7MXV9 40-49 years, male 223.3
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 222.4
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 222.3
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 220.8
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 220.4
GTEX-1F75A-1826-SM-7SB8G 50-59 years, male 218.0
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 216.9
GTEX-1I6K7-1026-SM-A9SLK 40-49 years, male 213.2
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 212.9
GTEX-1LGRB-1826-SM-CNPQL 50-59 years, female 211.4
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 211.2
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 209.1
GTEX-1JKYR-0926-SM-CMKGJ 20-29 years, male 208.7
GTEX-1GZ4H-0326-SM-7P8QX 50-59 years, female 208.2
GTEX-1KANA-2026-SM-DIPFB 20-29 years, male 207.9
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 207.1
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 205.8
GTEX-1HCU9-0326-SM-9WYSC 20-29 years, male 205.6
GTEX-QEG5-0726-SM-D4P1T 20-29 years, male 202.1
GTEX-1IY9M-2726-SM-CMKG5 60-69 years, male 202.0
GTEX-RU72-0626-SM-46MUI 50-59 years, female 199.5
GTEX-1H1CY-2226-SM-9WG7E 60-69 years, female 198.6
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 196.1
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 195.4
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 195.3
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 195.0
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 193.7
GTEX-1AMEY-1026-SM-718AA 30-39 years, female 192.6
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 191.6
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 191.5
GTEX-1J8Q3-1326-SM-CMKI1 60-69 years, male 189.9
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 187.6
GTEX-1H1E6-0926-SM-9YFLT 30-39 years, male 187.4
GTEX-1JKYN-0726-SM-ARZMY 30-39 years, male 186.8
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 186.6
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 186.2
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 184.9
GTEX-14BMV-0626-SM-793AU 50-59 years, male 184.8
GTEX-1ICG6-1326-SM-ACKWR 70-79 years, female 183.8
GTEX-1CAMS-1426-SM-7IGPM 40-49 years, female 183.1
GTEX-1J8QM-2026-SM-ARZMW 60-69 years, female 182.9
GTEX-1MCC2-2126-SM-EWRON 30-39 years, female 182.8
GTEX-1RAZQ-1226-SM-EWRNL 30-39 years, male 182.3
GTEX-1MA7W-1026-SM-DKPQK 20-29 years, female 181.7
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 179.5
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 178.9
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 175.7
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 174.5
GTEX-14BMU-1626-SM-5TDE7 20-29 years, female 174.3
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 172.2
GTEX-1H11D-1526-SM-9MQJY 40-49 years, male 170.7
GTEX-1S82Z-0726-SM-E6CHX 30-39 years, female 170.5
GTEX-1K2DA-1726-SM-CGQGS 50-59 years, male 170.0
GTEX-1R7EV-1526-SM-E8VOD 40-49 years, male 169.5
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 169.1
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 168.2
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 168.1
GTEX-1LSNM-1326-SM-E9TJ1 50-59 years, male 168.0
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 166.5
GTEX-1QCLY-1626-SM-DTXDW 30-39 years, male 164.7
GTEX-1GZHY-0726-SM-9WG6B 50-59 years, female 164.6
GTEX-ZGAY-1726-SM-DO91P 40-49 years, female 164.2
GTEX-1PDJ9-1126-SM-EXUSW 20-29 years, male 163.0
GTEX-1RQEC-2026-SM-DTXDM 60-69 years, male 162.0
GTEX-1HSKV-2026-SM-CMKGX 60-69 years, male 160.5
GTEX-1GF9X-1026-SM-ACKX2 40-49 years, female 159.4
GTEX-WFON-1826-SM-3GILG 40-49 years, male 158.9
GTEX-1MCYP-0126-SM-E6CIS 20-29 years, female 158.4
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 157.4
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 153.7
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 152.7
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 151.7
GTEX-11GSP-0926-SM-9WYSG 60-69 years, female 151.1
GTEX-14H4A-2526-SM-5YYAY 40-49 years, female 150.8
GTEX-TML8-1226-SM-32QON 40-49 years, female 150.2
GTEX-11P82-1326-SM-5HL62 20-29 years, male 150.1
GTEX-1B932-0826-SM-73KXG 40-49 years, female 150.0
GTEX-1IDJE-0826-SM-CKZNZ 50-59 years, female 149.6
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 149.0
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 148.6
GTEX-13SLX-2326-SM-5ZZWE 50-59 years, female 147.6
GTEX-1IKOH-2326-SM-CM2TW 60-69 years, female 147.3
GTEX-V955-2026-SM-3GAFA 60-69 years, male 147.0
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 145.4
GTEX-RU1J-0626-SM-4WAWY 20-29 years, female 145.0
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 144.7
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 143.1
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 142.8
GTEX-1HCUA-0726-SM-ACKVU 50-59 years, female 142.7
GTEX-1HKZK-1826-SM-ADEJ2 40-49 years, male 141.7
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 133.6
GTEX-13QJ3-0826-SM-7DHKK 50-59 years, male 133.1
GTEX-17HG3-0126-SM-7IGNH 30-39 years, female 131.6
GTEX-1LG7Z-0726-SM-CXKYD 30-39 years, male 127.3
GTEX-1B97J-0426-SM-79OLQ 50-59 years, female 127.1
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 126.2
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 125.0
GTEX-1GMR8-0726-SM-9KNVI 50-59 years, female 123.4
GTEX-15ER7-1626-SM-6PAMZ 20-29 years, female 121.4
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 120.7
GTEX-15FZZ-0726-SM-7KUFZ 30-39 years, female 119.9
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 117.3
GTEX-S341-1526-SM-4AD6K 40-49 years, female 114.9
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 114.7
GTEX-1F6I4-2526-SM-7SB8F 60-69 years, male 111.8
GTEX-16NGA-0826-SM-718AF 40-49 years, female 109.7
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 109.6
GTEX-11P81-1926-SM-5BC53 30-39 years, female 109.0
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 108.4
GTEX-1GN1W-1926-SM-7P8TH 50-59 years, female 106.7
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 103.9
GTEX-1L5NE-2126-SM-CY8IH 50-59 years, male 100.1
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 95.3
GTEX-1QCLZ-2326-SM-DTXDO 60-69 years, female 91.5
GTEX-117YX-1426-SM-5H12H 50-59 years, male 91.3
GTEX-1NUQO-2226-SM-E9U68 20-29 years, female 90.1
GTEX-1LVAN-1326-SM-CNPQE 50-59 years, female 86.9
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 85.4
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 83.8
GTEX-1M5QR-2526-SM-E9U5P 40-49 years, male 82.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 76.8
GTEX-1GN1U-0526-SM-9KNTT 50-59 years, female 76.4
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 76.2
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 73.3
GTEX-ZTPG-2826-SM-57WGA 20-29 years, female 71.8
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 68.5
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 67.1
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 65.5
GTEX-1HBPN-2326-SM-9WPPU 50-59 years, male 63.2
GTEX-1HSGN-1526-SM-A9SMO 40-49 years, female 58.8
GTEX-T6MN-0726-SM-32PML 50-59 years, male 57.4
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 56.4
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 48.3
GTEX-1LVAM-0926-SM-E9TJ2 50-59 years, female 38.4
GTEX-1POEN-0926-SM-DTX88 30-39 years, female 32.7
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 27.7
Show allShow less

BREAST - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

258.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Breast
Scaled Tags Per Million: 258.9
FF:10080-102A8 77 years, female 258.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org