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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:391.6 nTPM
HPA Brain:401.0 nTPM
GTEx:391.6 nTPM
FANTOM5:416.1 Scaled Tags Per Million
Pig:219.5 nTPM
Mouse:751.2 nTPM
Allen mouse:0.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029095Antibody HPA063885Antibody CAB016120
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

401.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 364.3
2290 Female, age 72, unknown 444.4
2846 Female, age 79, unknown 437.5
1781 Male, age 74, unknown 428.5
1854 Male, age 80, left hemisphere 396.6
1857 Female, age 85, left hemisphere 371.8
2289 Male, age 61, right hemisphere 327.7
2288 Male, age 75, left hemisphere 318.9
2481 Female, age 94, left hemisphere 188.8
Globus pallidus, externus
nTPM: 63.0
2646 Male, age 61, right hemisphere 99.9
2395 Male, age 75, both hemispheres 64.5
2772 Female, age 79, unknown 60.4
2567 Female, age 72, unknown 51.9
1996 Male, age 80, right hemisphere 38.5
Globus pallidus, internus
nTPM: 48.6
2483 Female, age 94, right hemisphere 125.3
2566 Female, age 72, unknown 51.6
1818 Male, age 74, unknown 46.2
2287 Male, age 75, right hemisphere 37.1
2037 Male, age 80, right hemisphere 32.3
2778 Female, age 91, both hemispheres 25.6
2111 Female, age 85, right hemisphere 22.1
Nucleus accumbens
nTPM: 320.5
1856 Female, age 91, right hemisphere 511.7
1783 Male, age 74, unknown 492.2
1806 Female, age 85, left hemisphere 341.7
2824 Male, age 61, right hemisphere 326.7
2698 Female, age 72, unknown 308.4
2286 Male, age 75, left hemisphere 303.0
2732 Male, age 80, right hemisphere 148.5
2391 Female, age 94, left hemisphere 131.9
Nucleus basalis of Meynert
nTPM: 247.5
2484 Female, age 94, left hemisphere 306.6
2821 Male, age 75, both hemispheres 275.6
2393 Male, age 80, right hemisphere 263.0
2569 Male, age 61, both hemispheres 144.7
Nucleus of the diagonal band
nTPM: 401.0
1812 Female, age 91, both hemispheres 498.4
2775 Male, age 80, right hemisphere 464.9
2029 Male, age 61, right hemisphere 460.6
2195 Female, age 85, both hemispheres 431.9
1979 Male, age 74, unknown 149.1
Putamen
nTPM: 379.4
2647 Male, age 75, left hemisphere 434.6
1838 Male, age 80, right hemisphere 433.9
1937 Female, age 91, right hemisphere 415.4
1829 Male, age 74, unknown 391.4
2466 Female, age 79, unknown 389.5
2489 Female, age 72, unknown 363.8
2482 Female, age 94, left hemisphere 227.2
Septal nuclei
nTPM: 318.6
1960 Male, age 74, unknown 480.7
2629 Female, age 94, right hemisphere 430.4
2031 Female, age 72, unknown 407.2
2009 Female, age 91, both hemispheres 406.4
2059 Female, age 85, both hemispheres 280.4
2394 Male, age 61, left hemisphere 135.7
2199 Male, age 80, right hemisphere 89.4
Stria terminalis, bed nucleus
nTPM: 340.9
1974 Female, age 91, both hemispheres 450.8
2486 Female, age 94, both hemispheres 432.8
2201 Male, age 74, unknown 139.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

391.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 325.4
Samples: 246

Max nTPM: 761.7
Min nTPM: 51.5
Std nTPM: 161.1
Median nTPM: 313.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 761.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 701.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 675.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 671.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 666.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 664.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 655.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 649.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 647.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 643.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 637.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 636.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 614.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 612.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 599.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 593.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 585.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 581.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 581.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 580.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 571.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 570.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 563.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 556.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 550.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 549.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 548.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 544.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 539.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 539.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 536.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 533.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 533.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 528.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 523.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 512.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 511.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 505.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 505.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 505.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 499.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 499.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 495.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 493.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 482.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 482.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 472.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 469.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 467.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 461.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 460.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 459.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 458.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 455.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 454.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 453.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 452.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 450.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 445.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 444.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 436.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 433.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 430.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 430.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 429.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 429.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 424.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 422.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 421.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 419.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 418.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 413.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 411.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 409.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 407.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 405.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 405.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 402.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 400.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 399.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 398.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 396.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 395.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 394.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 394.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 394.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 389.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 388.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 384.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 383.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 382.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 379.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 375.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 375.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 371.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 370.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 367.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 364.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 362.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 361.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 360.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 359.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 357.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 354.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 352.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 351.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 349.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 347.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 343.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 340.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 340.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 339.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 335.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 331.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 331.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 328.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 325.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 322.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 320.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 318.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 315.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 315.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 314.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 312.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 310.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 305.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 304.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 304.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 302.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 299.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 297.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 294.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 294.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 292.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 287.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 286.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 284.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 281.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 280.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 277.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 268.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 268.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 266.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 265.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 262.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 261.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 259.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 258.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 254.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 253.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 253.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 253.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 251.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 250.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 249.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 248.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 246.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 245.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 244.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 243.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 240.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 239.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 239.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 238.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 230.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 227.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 227.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 225.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 225.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 222.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 222.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 218.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 217.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 216.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 216.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 208.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 207.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 206.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 204.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 203.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 200.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 199.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 199.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 198.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 195.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 195.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 193.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 192.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 184.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 183.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 181.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 180.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 178.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 176.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 171.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 170.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 169.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 166.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 162.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 160.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 160.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 160.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 159.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 159.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 157.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 154.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 154.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 148.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 143.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 136.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 135.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 133.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 133.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 131.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 130.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 123.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 123.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 122.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 120.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 120.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 119.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 115.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 113.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 110.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 109.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 108.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 107.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 107.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 103.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 99.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 98.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 98.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 97.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 91.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 83.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 76.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 73.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 68.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 68.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 61.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 53.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 51.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 391.6
Samples: 246

Max nTPM: 959.5
Min nTPM: 25.2
Std nTPM: 173.6
Median nTPM: 422.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 959.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 782.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 731.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 725.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 710.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 709.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 705.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 688.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 682.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 682.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 678.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 669.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 661.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 653.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 644.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 642.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 635.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 627.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 623.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 618.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 615.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 601.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 600.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 599.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 592.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 591.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 589.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 583.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 581.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 578.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 576.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 576.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 574.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 571.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 570.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 565.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 565.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 564.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 562.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 561.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 561.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 548.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 547.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 545.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 543.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 539.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 535.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 534.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 534.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 533.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 530.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 527.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 526.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 520.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 520.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 519.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 516.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 511.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 509.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 509.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 508.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 508.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 503.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 503.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 501.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 501.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 500.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 499.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 499.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 499.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 496.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 496.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 496.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 495.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 490.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 490.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 489.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 489.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 484.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 484.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 483.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 481.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 470.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 470.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 467.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 467.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 467.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 467.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 466.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 464.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 462.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 462.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 461.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 460.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 459.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 457.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 455.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 455.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 455.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 451.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 450.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 449.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 448.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 448.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 446.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 445.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 442.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 442.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 439.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 437.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 435.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 434.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 433.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 431.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 430.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 430.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 428.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 427.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 426.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 425.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 424.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 423.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 422.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 422.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 420.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 416.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 415.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 414.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 414.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 410.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 409.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 407.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 402.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 401.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 400.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 400.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 397.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 393.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 389.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 388.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 387.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 385.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 382.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 381.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 378.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 376.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 375.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 374.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 374.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 370.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 368.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 366.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 364.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 361.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 357.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 352.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 350.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 346.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 344.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 336.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 333.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 333.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 332.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 332.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 332.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 330.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 329.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 323.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 322.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 320.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 319.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 318.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 314.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 308.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 302.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 296.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 286.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 282.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 281.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 272.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 270.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 259.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 254.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 254.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 253.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 250.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 250.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 249.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 241.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 240.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 235.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 234.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 231.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 229.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 229.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 221.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 221.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 220.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 217.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 211.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 210.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 204.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 191.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 185.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 183.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 181.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 180.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 174.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 163.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 163.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 161.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 159.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 159.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 154.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 154.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 149.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 145.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 144.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 143.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 135.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 134.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 133.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 128.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 128.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 125.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 125.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 123.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 123.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 123.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 119.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 118.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 112.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 100.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 97.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 92.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 90.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 86.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 61.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 58.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 53.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 44.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 44.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 41.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 41.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 38.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 25.2
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Brain - Putamen (basal ganglia)
Average nTPM: 298.4
Samples: 205

Max nTPM: 726.9
Min nTPM: 47.2
Std nTPM: 147.1
Median nTPM: 291.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 726.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 661.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 602.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 588.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 579.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 562.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 559.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 557.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 549.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 548.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 535.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 533.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 532.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 525.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 522.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 520.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 518.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 516.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 513.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 510.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 510.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 486.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 485.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 485.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 483.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 483.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 483.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 480.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 478.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 476.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 473.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 468.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 468.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 465.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 461.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 451.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 447.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 446.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 446.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 442.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 442.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 440.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 436.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 434.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 433.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 433.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 428.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 427.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 424.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 423.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 422.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 418.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 418.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 417.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 411.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 409.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 408.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 408.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 406.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 405.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 397.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 397.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 395.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 391.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 384.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 381.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 379.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 377.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 376.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 365.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 365.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 362.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 347.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 345.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 338.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 336.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 333.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 331.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 331.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 331.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 329.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 326.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 321.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 321.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 319.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 318.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 313.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 310.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 310.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 309.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 309.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 308.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 308.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 308.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 307.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 304.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 300.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 298.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 298.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 296.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 295.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 293.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 291.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 288.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 276.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 275.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 275.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 274.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 274.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 272.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 268.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 267.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 266.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 264.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 263.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 259.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 258.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 254.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 252.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 252.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 251.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 244.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 243.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 243.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 239.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 239.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 237.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 237.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 235.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 232.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 228.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 227.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 225.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 224.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 221.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 220.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 216.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 205.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 203.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 199.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 199.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 194.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 194.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 194.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 190.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 188.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 187.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 184.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 182.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 181.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 179.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 178.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 178.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 177.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 173.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 168.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 165.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 165.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 164.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 164.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 162.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 159.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 156.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 152.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 152.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 150.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 150.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 149.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 148.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 145.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 144.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 143.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 140.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 136.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 135.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 135.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 135.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 120.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 119.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 119.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 118.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 116.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 115.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 110.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 107.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 105.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 104.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 102.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 99.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 95.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 92.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 92.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 92.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 89.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 82.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 80.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 78.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 75.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 71.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 66.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 59.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 56.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 49.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 48.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

416.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 262.5
FF:10164-103B2 76 years, female 262.5
Nucleus accumbens
Scaled Tags Per Million: 395.4
FF:10037-101F1 23-56 years, mixed 395.4
Putamen
Scaled Tags Per Million: 416.1
FF:10176-103C5 60 years, female 416.1
Globus pallidus
Scaled Tags Per Million: 79.0
FF:10175-103C4 60 years, female 114.5
FF:10161-103A8 76 years, female 43.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.5
Pig sample Sample description nTPM
Caudate
nTPM: 189.9
Samples: 4

Max nTPM: 247.7
Min nTPM: 141.6
Sample A Female 141.6
Sample B Female 185.2
Sample C Male 247.7
Sample D Male 185.0
Putamen
nTPM: 219.5
Samples: 4

Max nTPM: 335.8
Min nTPM: 80.9
Sample A Female 80.9
Sample B Female 209.4
Sample C Male 335.8
Sample D Male 252.0
Septum
nTPM: 99.1
Samples: 4

Max nTPM: 124.0
Min nTPM: 68.9
Sample A Female 121.4
Sample B Female 124.0
Sample C Male 68.9
Sample D Male 82.2
Ventral pallidum
nTPM: 132.5
Samples: 4

Max nTPM: 162.5
Min nTPM: 114.0
Sample A Female 132.5
Sample B Female 162.5
Sample C Male 114.0
Sample D Male 120.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

751.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 751.2
Samples: 4

Max nTPM: 829.3
Min nTPM: 723.1
Sample A Male 724.7
Sample B Male 727.8
Sample C Female 723.1
Sample D Female 829.3
Septum
nTPM: 431.8
Samples: 4

Max nTPM: 449.9
Min nTPM: 390.9
Sample A Male 443.9
Sample B Male 449.9
Sample C Female 442.6
Sample D Female 390.9
Ventral forebrain
nTPM: 656.4
Samples: 4

Max nTPM: 739.2
Min nTPM: 581.2
Sample A Male 629.6
Sample B Male 581.2
Sample C Female 739.2
Sample D Female 675.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.8
958 Antisense, RP_Baylor_102973, Mouse strain C57BL/6J (56 days, male) 2.3
959 Antisense, RP_Baylor_102973, Mouse strain C57BL/6J (56 days, male) 1.5
75990859 Antisense, RP_060608_01_F09, Mouse strain C57BL/6J (56 days, male) 0.1
960 Sense, RPS_Baylor_37027, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.5
958 Antisense, RP_Baylor_102973, Mouse strain C57BL/6J (56 days, male) 1.1
959 Antisense, RP_Baylor_102973, Mouse strain C57BL/6J (56 days, male) 0.7
960 Sense, RPS_Baylor_37027, Mouse strain C57BL/6J (56 days, male) 0.3
75990859 Antisense, RP_060608_01_F09, Mouse strain C57BL/6J (56 days, male) 0.1

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