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SEPTIN5
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:325.4 nTPM
FANTOM5:262.5 Scaled Tags Per Million
Pig:189.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029095Antibody HPA063885Antibody CAB016120
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedLow







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

325.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 325.4
Samples: 246

Max nTPM: 761.7
Min nTPM: 51.5
Std nTPM: 161.1
Median nTPM: 313.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 761.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 701.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 675.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 671.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 666.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 664.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 655.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 649.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 647.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 643.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 637.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 636.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 614.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 612.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 599.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 593.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 585.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 581.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 581.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 580.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 571.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 570.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 563.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 556.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 550.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 549.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 548.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 544.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 539.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 539.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 536.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 533.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 533.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 528.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 523.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 512.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 511.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 505.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 505.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 505.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 499.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 499.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 495.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 493.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 482.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 482.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 472.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 469.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 467.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 461.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 460.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 459.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 458.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 455.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 454.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 453.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 452.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 450.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 445.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 444.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 436.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 433.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 430.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 430.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 429.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 429.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 424.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 422.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 421.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 419.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 418.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 413.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 411.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 409.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 407.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 405.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 405.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 402.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 400.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 399.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 398.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 396.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 395.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 394.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 394.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 394.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 389.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 388.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 384.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 383.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 382.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 379.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 375.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 375.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 371.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 370.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 367.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 364.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 362.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 361.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 360.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 359.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 357.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 354.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 352.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 351.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 349.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 347.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 343.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 340.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 340.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 339.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 335.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 331.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 331.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 328.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 325.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 322.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 320.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 318.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 315.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 315.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 314.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 312.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 310.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 305.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 304.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 304.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 302.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 299.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 297.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 294.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 294.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 292.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 287.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 286.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 284.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 281.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 280.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 277.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 268.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 268.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 266.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 265.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 262.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 261.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 259.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 258.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 254.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 253.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 253.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 253.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 251.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 250.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 249.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 248.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 246.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 245.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 244.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 243.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 240.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 239.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 239.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 238.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 230.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 227.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 227.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 225.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 225.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 222.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 222.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 218.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 217.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 216.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 216.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 208.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 207.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 206.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 204.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 203.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 200.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 199.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 199.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 198.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 195.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 195.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 193.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 192.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 184.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 183.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 181.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 180.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 178.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 176.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 171.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 170.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 169.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 166.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 162.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 160.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 160.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 160.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 159.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 159.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 157.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 154.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 154.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 148.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 143.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 136.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 135.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 133.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 133.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 131.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 130.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 123.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 123.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 122.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 120.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 120.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 119.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 115.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 113.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 110.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 109.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 108.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 107.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 107.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 103.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 99.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 98.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 98.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 97.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 91.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 83.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 76.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 73.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 68.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 68.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 61.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 53.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 51.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 262.5
FF:10164-103B2 76 years, female 262.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.9
Pig sample Sample description nTPM
Caudate
nTPM: 189.9
Samples: 4

Max nTPM: 247.7
Min nTPM: 141.6
Sample A Female 141.6
Sample B Female 185.2
Sample C Male 247.7
Sample D Male 185.0

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