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NAP1L1
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  • NAP1L1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:221.8 nTPM
FANTOM5:309.0 Scaled Tags Per Million
Pig:191.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA028861
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

221.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 221.8
Samples: 246

Max nTPM: 495.4
Min nTPM: 143.0
Std nTPM: 49.3
Median nTPM: 212.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 495.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 429.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 372.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 364.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 364.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 354.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 350.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 349.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 330.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 326.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 317.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 313.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 305.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 305.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 302.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 300.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 298.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 296.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 295.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 294.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 293.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 286.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 284.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 278.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 278.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 278.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 278.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 277.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 275.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 274.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 273.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 271.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 271.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 270.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 264.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 264.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 262.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 262.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 262.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 262.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 260.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 260.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 259.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 259.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 259.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 257.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 257.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 257.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 255.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 254.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 253.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 252.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 251.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 251.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 249.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 249.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 246.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 246.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 245.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 244.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 242.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 242.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 241.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 240.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 240.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 239.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 239.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 239.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 238.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 238.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 237.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 236.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 236.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 235.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 235.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 234.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 234.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 234.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 234.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 234.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 234.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 233.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 232.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 231.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 231.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 231.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 231.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 230.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 230.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 229.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 229.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 228.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 228.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 227.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 227.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 225.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 225.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 224.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 224.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 224.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 223.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 222.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 222.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 221.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 220.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 219.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 219.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 219.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 218.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 218.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 217.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 217.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 216.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 215.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 214.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 214.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 214.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 213.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 213.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 213.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 213.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 213.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 212.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 212.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 212.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 212.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 211.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 211.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 211.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 211.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 210.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 210.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 209.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 209.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 209.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 209.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 209.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 208.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 206.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 206.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 205.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 205.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 205.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 205.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 204.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 204.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 204.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 204.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 203.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 203.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 203.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 203.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 202.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 202.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 201.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 200.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 200.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 200.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 199.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 198.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 198.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 196.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 195.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 195.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 195.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 194.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 193.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 193.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 193.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 192.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 192.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 191.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 191.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 191.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 191.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 191.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 190.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 190.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 190.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 188.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 188.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 188.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 188.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 188.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 188.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 187.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 185.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 184.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 184.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 184.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 183.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 183.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 182.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 182.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 182.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 182.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 181.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 181.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 180.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 180.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 180.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 179.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 179.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 179.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 178.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 178.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 177.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 177.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 177.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 177.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 176.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 175.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 174.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 173.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 172.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 170.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 169.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 169.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 168.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 167.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 166.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 165.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 165.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 165.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 165.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 164.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 163.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 163.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 162.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 162.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 162.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 162.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 161.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 160.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 159.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 158.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 156.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 154.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 153.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 152.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 151.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 150.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 150.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 143.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

309.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 309.0
FF:10164-103B2 76 years, female 309.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.0
Pig sample Sample description nTPM
Caudate
nTPM: 191.0
Samples: 4

Max nTPM: 204.7
Min nTPM: 160.9
Sample A Female 195.1
Sample B Female 160.9
Sample C Male 204.7
Sample D Male 203.2

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