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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
73.4
nTPM
GTEx:
73.4
nTPM
FANTOM5:
227.2
Scaled Tags Per Million
Pig:
47.6
nTPM
Mouse:
163.9
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
73.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 73.4
Samples: 105
Max nTPM: 407.1
Min nTPM: 3.6
Std nTPM: 64.2
Median nTPM:
4_1
88 years, female
407.1
321_1
62 years, female
329.7
350_1
84 years, female
247.7
353_1
82 years, female
206.8
316_1
62 years, male
202.0
386_1
76 years, male
185.1
384_1
83 years, male
167.4
518_1
75 years, female
157.4
320_1
89 years, female
155.1
349_1
83 years, male
152.4
173_1
67 years, male
151.3
351_1
91 years, male
146.6
319_1
81 years, male
143.4
295_1
61 years, female
139.9
480_1
63 years, male
133.2
120_1
70 years, female
131.0
506_1
65 years, male
130.6
404_1
82 years, female
123.7
452_1
88 years, female
122.1
2_1
77 years, female
120.9
145_1
84 years, male
111.0
218_1
71 years, female
106.5
394_1
75 years, female
104.2
311_1
78 years, male
100.6
354_1
81 years, female
98.7
375_1
74 years, female
97.3
163_1
78 years, male
89.1
318_1
68 years, male
86.4
377_1
82 years, female
86.4
265_1
87 years, male
81.1
264_1
73 years, female
79.9
352_1
62 years, male
79.9
447_1
81 years, male
77.5
405_1
91 years, male
75.6
379_1
60 years, male
75.1
355_1
70 years, female
75.0
376_1
75 years, female
74.6
406_1
79 years, male
73.8
322_1
76 years, male
73.1
18_1
88 years, male
72.2
396_1
62 years, male
69.1
177_1
74 years, male
69.0
17_1
71 years, male
67.2
389_1
86 years, female
66.2
291_1
76 years, male
65.8
251_1
78 years, male
65.7
117_1
61 years, male
64.3
356_1
87 years, female
63.6
517_1
88 years, male
63.5
9_1
66 years, female
63.0
501_1
88 years, male
62.1
109_1
81 years, female
59.6
139_1
64 years, female
59.4
335_1
73 years, female
58.8
314_1
67 years, male
56.6
526_1
61 years, male
55.3
286_1
68 years, female
52.8
81_1
67 years, male
52.6
153_1
70 years, female
48.9
189_1
76 years, male
48.4
172_1
72 years, female
46.8
243_1
75 years, male
45.6
42_1
85 years, male
44.8
503_1
68 years, male
43.6
317_1
60 years, male
42.4
348_1
84 years, male
42.0
142_1
61 years, female
39.5
115_1
83 years, male
38.6
324_1
76 years, male
38.4
292_1
71 years, male
37.6
6_1
73 years, female
37.4
35_1
74 years, female
37.1
99_1
64 years, male
33.9
293_1
68 years, female
33.6
288_1
66 years, female
33.2
126_1
63 years, male
32.7
499_1
55 years, female
32.7
41_1
94 years, female
32.3
149_1
88 years, male
30.8
425_1
59 years, female
30.7
237_1
82 years, male
29.6
254_1
77 years, female
28.3
266_1
85 years, male
27.7
32_1
67 years, male
27.2
315_1
62 years, female
26.7
246_1
77 years, male
25.3
313_1
79 years, female
24.8
308_1
70 years, female
24.5
307_1
66 years, female
24.2
347_1
72 years, male
23.1
495_1
57 years, female
21.8
162_1
79 years, female
21.5
468_1
89 years, male
19.8
119_1
70 years, female
18.1
137_1
83 years, male
17.2
217_1
76 years, male
16.1
43_1
64 years, female
14.7
89_1
63 years, male
13.8
466_1
57 years, female
13.5
491_1
89 years, female
10.7
229_1
69 years, female
10.6
490_1
67 years, female
10.3
414_1
84 years, female
7.7
415_1
77 years, female
5.1
413_1
59 years, female
3.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
