HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:291.4 nTPM
HPA Brain:214.8 nTPM
GTEx:291.4 nTPM
FANTOM5:1061.5 Scaled Tags Per Million
Pig:577.9 nTPM
Mouse:697.2 nTPM
Allen mouse:17.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 214.8
Sample id Sample description nTPM
Hippocampus
nTPM: 186.6
2529 Female, age 94, left hemisphere 247.1
1911 Female, age 85, right hemisphere 201.9
2148 Female, age 91, left hemisphere 200.1
1898 Male, age 80, left hemisphere 169.2
1855 Male, age 76, left hemisphere 153.9
2621 Female, age 67, right hemisphere 147.4
Dentate gyrus
nTPM: 196.2
2528 Male, age 74, both hemispheres 309.0
2246 Female, age 85, both hemispheres 210.3
2530 Female, age 94, left hemisphere 198.4
2010 Male, age 76, both hemispheres 186.1
1927 Female, age 91, both hemispheres 146.5
2531 Female, age 67, both hemispheres 127.1
Entorhinal gyrus
nTPM: 157.1
2117 Female, age 91, right hemisphere 191.2
1938 Female, age 85, left hemisphere 189.2
2686 Male, age 75, right hemisphere 158.4
1787 Male, age 76, left hemisphere 151.1
2764 Male, age 80, right hemisphere 129.7
2613 Female, age 94, left hemisphere 122.8
Hippocampus, CA1
nTPM: 207.0
2527 Male, age 74, both hemispheres 291.7
2082 Female, age 91, right hemisphere 235.3
2749 Male, age 80, left hemisphere 181.9
2045 Male, age 76, both hemispheres 176.5
1873 Female, age 85, both hemispheres 149.7
Hippocampus, CA2
nTPM: 190.9
2249 Male, age 74, both hemispheres 322.2
1940 Female, age 85, left hemisphere 192.4
2113 Female, age 91, right hemisphere 189.5
2437 Female, age 94, left hemisphere 175.9
1963 Male, age 80, left hemisphere 137.1
1892 Male, age 76, both hemispheres 128.4
Hippocampus, CA3
nTPM: 194.7
2436 Male, age 74, both hemispheres 285.4
1891 Female, age 85, both hemispheres 227.3
2137 Male, age 80, left hemisphere 219.8
2620 Female, age 94, left hemisphere 158.0
2861 Female, age 67, both hemispheres 149.8
1867 Male, age 76, both hemispheres 128.1
Parahippocampal cortex
nTPM: 185.4
2250 Female, age 67, right hemisphere 309.9
2692 Male, age 74, both hemispheres 248.0
2018 Male, age 76, both hemispheres 196.7
1990 Female, age 91, right hemisphere 187.2
1933 Female, age 85, both hemispheres 186.1
2622 Female, age 67, right hemisphere 175.6
2245 Female, age 91, both hemispheres 149.8
1850 Male, age 80, both hemispheres 142.8
2532 Female, age 72, left hemisphere 134.0
2693 Female, age 94, both hemispheres 123.8
Perirhinal gyrus
nTPM: 141.4
1841 Female, age 85, right hemisphere 175.8
1847 Female, age 91, left hemisphere 159.8
1794 Male, age 80, right hemisphere 155.2
2521 Female, age 94, right hemisphere 130.8
2848 Male, age 76, right hemisphere 85.7
Subiculum
nTPM: 214.8
2619 Male, age 74, both hemispheres 288.6
1977 Female, age 85, both hemispheres 226.6
2729 Female, age 91, right hemisphere 218.5
2042 Male, age 76, both hemispheres 193.1
2438 Female, age 94, left hemisphere 186.3
1901 Male, age 80, both hemispheres 176.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 291.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 291.4
Samples: 197

Max nTPM: 2267.0
Min nTPM: 61.2
Std nTPM: 300.9
Median nTPM: 185.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 2267.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2029.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1599.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 1416.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 1145.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 1000.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 930.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 905.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 829.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 799.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 778.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1061.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1061.5
FF:10169-103B7 60 years, female 1628.4
FF:10153-102I9 76 years, female 494.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 577.9
Pig sample Sample description nTPM
Subiculum
nTPM: 453.7
Samples: 4

Max nTPM: 558.3
Min nTPM: 362.8
Sample A Female 482.6
Sample B Female 558.3
Sample C Male 411.0
Sample D Male 362.8
Dorsal hippocampus
nTPM: 577.9
Samples: 4

Max nTPM: 635.1
Min nTPM: 461.7
Sample A Female 635.1
Sample B Female 597.9
Sample C Male 616.8
Sample D Male 461.7
Entorhinal cortex
nTPM: 446.4
Samples: 4

Max nTPM: 605.5
Min nTPM: 274.4
Sample A Female 356.1
Sample B Female 605.5
Sample C Male 549.6
Sample D Male 274.4
Ventral hippocampus
nTPM: 508.4
Samples: 4

Max nTPM: 659.0
Min nTPM: 387.9
Sample A Female 387.9
Sample B Female 520.3
Sample C Male 659.0
Sample D Male 466.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 697.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 581.4
Samples: 4

Max nTPM: 716.7
Min nTPM: 485.7
Sample A Male 601.3
Sample B Male 485.7
Sample C Female 716.7
Sample D Female 521.8
Hippocampal formation
nTPM: 697.2
Samples: 4

Max nTPM: 950.5
Min nTPM: 568.9
Sample A Male 625.5
Sample B Male 568.9
Sample C Female 643.8
Sample D Female 950.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.7
67767450 Antisense, RP_040916_01_H10, Mouse strain C57BL/6J (56 days, male) 17.7

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