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TISSUE VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:884.0 nTPM
GTEx:884.0 nTPM
FANTOM5:450.4 Scaled Tags Per Million

VAGINA - Annotated protein expression
Pending normal tissue analysis

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

884.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 884.0
Samples: 156

Max nTPM: 7492.2
Min nTPM: 17.9
Std nTPM: 983.3
Median nTPM: 526.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 7492.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 5043.8
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 3610.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 3040.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 3011.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2938.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2595.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2511.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2425.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2417.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2339.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2305.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2159.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2155.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 2035.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1994.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1950.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1939.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1865.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1840.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1826.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1783.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1769.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 1743.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1626.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1596.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1564.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1543.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1537.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1528.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1521.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1517.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1515.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1494.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1455.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1451.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1450.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1385.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1381.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1357.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1307.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1221.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1216.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1190.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1152.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1071.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1066.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1064.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1050.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1037.5
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1019.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1004.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 989.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 918.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 916.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 904.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 879.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 860.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 857.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 839.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 788.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 746.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 733.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 691.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 687.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 673.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 642.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 638.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 622.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 604.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 598.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 596.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 591.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 583.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 578.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 578.1
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 549.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 536.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 516.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 499.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 477.5
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 475.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 474.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 459.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 445.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 445.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 439.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 435.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 432.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 428.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 418.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 416.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 411.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 408.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 399.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 394.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 384.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 382.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 377.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 372.2
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 358.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 353.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 351.2
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 351.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 329.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 299.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 295.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 294.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 284.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 281.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 276.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 256.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 255.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 254.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 240.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 233.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 232.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 224.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 218.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 216.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 215.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 213.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 209.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 197.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 196.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 183.4
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 181.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 175.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 169.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 158.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 158.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 157.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 148.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 144.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 141.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 139.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 135.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 120.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 103.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 92.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 90.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 84.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 83.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 71.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 69.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 68.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 54.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 46.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 46.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 44.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 39.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 31.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 31.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 25.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 22.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 17.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

450.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 450.4
FF:10204-103F6 68 years, female 450.4

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