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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:209.0 nTPM
HPA Brain:157.9 nTPM
GTEx:209.0 nTPM
FANTOM5:193.1 Scaled Tags Per Million
Pig:248.8 nTPM
Mouse:394.5 nTPM
Allen mouse:13.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042123Antibody HPA048064Antibody CAB037314
Glial cells LowNot detectedNot detected
Neuronal cells HighNot detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 153.8
1857 Female, age 85, left hemisphere 177.1
2481 Female, age 94, left hemisphere 174.5
2288 Male, age 75, left hemisphere 161.1
2846 Female, age 79, unknown 159.3
2290 Female, age 72, unknown 156.0
1854 Male, age 80, left hemisphere 144.5
1781 Male, age 74, unknown 135.6
2289 Male, age 61, right hemisphere 122.0
Globus pallidus, externus
nTPM: 122.6
2772 Female, age 79, unknown 163.3
1996 Male, age 80, right hemisphere 143.7
2395 Male, age 75, both hemispheres 130.5
2646 Male, age 61, right hemisphere 88.4
2567 Female, age 72, unknown 87.1
Globus pallidus, internus
nTPM: 133.4
2287 Male, age 75, right hemisphere 165.7
2483 Female, age 94, right hemisphere 150.9
2778 Female, age 91, both hemispheres 143.9
1818 Male, age 74, unknown 132.8
2037 Male, age 80, right hemisphere 131.3
2111 Female, age 85, right hemisphere 110.0
2566 Female, age 72, unknown 99.1
Nucleus accumbens
nTPM: 147.7
1856 Female, age 91, right hemisphere 175.7
2391 Female, age 94, left hemisphere 163.6
2286 Male, age 75, left hemisphere 163.3
2698 Female, age 72, unknown 158.8
1806 Female, age 85, left hemisphere 144.5
1783 Male, age 74, unknown 131.3
2824 Male, age 61, right hemisphere 127.5
2732 Male, age 80, right hemisphere 116.7
Nucleus basalis of Meynert
nTPM: 123.1
2484 Female, age 94, left hemisphere 133.9
2393 Male, age 80, right hemisphere 131.6
2821 Male, age 75, both hemispheres 124.8
2569 Male, age 61, both hemispheres 102.1
Nucleus of the diagonal band
nTPM: 157.9
2195 Female, age 85, both hemispheres 173.6
2775 Male, age 80, right hemisphere 173.1
1812 Female, age 91, both hemispheres 169.7
1979 Male, age 74, unknown 148.1
2029 Male, age 61, right hemisphere 125.2
Putamen
nTPM: 131.4
2466 Female, age 79, unknown 159.0
2482 Female, age 94, left hemisphere 155.3
1838 Male, age 80, right hemisphere 139.0
1829 Male, age 74, unknown 138.1
1937 Female, age 91, right hemisphere 135.4
2489 Female, age 72, unknown 99.1
2647 Male, age 75, left hemisphere 93.6
Septal nuclei
nTPM: 146.6
2031 Female, age 72, unknown 179.4
1960 Male, age 74, unknown 165.6
2629 Female, age 94, right hemisphere 142.8
2009 Female, age 91, both hemispheres 142.3
2199 Male, age 80, right hemisphere 139.1
2059 Female, age 85, both hemispheres 135.7
2394 Male, age 61, left hemisphere 121.6
Stria terminalis, bed nucleus
nTPM: 130.0
1974 Female, age 91, both hemispheres 142.2
2201 Male, age 74, unknown 128.5
2486 Female, age 94, both hemispheres 119.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

209.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 193.3
Samples: 246

Max nTPM: 411.4
Min nTPM: 123.1
Std nTPM: 37.0
Median nTPM: 189.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 411.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 355.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 332.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 326.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 322.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 304.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 299.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 263.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 260.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 259.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 256.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 254.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 254.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 252.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 242.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 241.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 241.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 237.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 236.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 236.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 235.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 235.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 235.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 234.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 233.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 233.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 232.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 231.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 228.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 227.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 226.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 225.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 225.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 223.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 222.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 222.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 221.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 221.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 221.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 220.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 219.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 219.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 219.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 218.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 218.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 218.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 217.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 217.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 216.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 215.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 213.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 213.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 213.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 212.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 212.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 210.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 210.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 210.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 210.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 209.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 209.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 209.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 208.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 208.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 207.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 206.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 206.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 206.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 205.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 204.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 204.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 204.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 204.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 203.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 203.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 203.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 202.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 201.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 201.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 201.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 200.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 200.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 199.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 198.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 198.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 198.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 197.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 197.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 197.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 197.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 196.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 196.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 196.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 196.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 196.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 196.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 195.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 195.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 195.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 195.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 195.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 194.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 194.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 193.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 193.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 193.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 192.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 191.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 191.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 191.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 191.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 190.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 190.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 190.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 190.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 190.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 190.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 189.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 189.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 189.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 189.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 189.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 189.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 188.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 188.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 188.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 187.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 187.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 187.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 187.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 186.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 186.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 185.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 185.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 185.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 185.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 184.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 184.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 183.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 183.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 183.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 183.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 183.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 182.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 182.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 182.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 181.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 181.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 180.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 180.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 180.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 180.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 179.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 179.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 179.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 179.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 179.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 178.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 178.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 178.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 178.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 178.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 177.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 177.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 177.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 177.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 177.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 176.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 176.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 176.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 176.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 176.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 176.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 174.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 174.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 174.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 174.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 173.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 173.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 173.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 172.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 172.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 172.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 171.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 171.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 170.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 170.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 170.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 170.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 169.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 169.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 169.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 168.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 168.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 168.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 167.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 167.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 166.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 166.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 166.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 166.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 165.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 165.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 164.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 163.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 163.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 163.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 163.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 162.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 162.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 162.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 160.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 159.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 159.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 159.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 158.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 157.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 156.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 156.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 154.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 154.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 154.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 154.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 151.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 150.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 149.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 149.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 148.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 147.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 146.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 145.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 145.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 144.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 144.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 143.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 141.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 137.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 137.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 137.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 137.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 126.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 125.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 123.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 123.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 209.0
Samples: 246

Max nTPM: 379.7
Min nTPM: 115.9
Std nTPM: 40.8
Median nTPM: 207.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 379.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 356.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 306.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 306.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 303.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 298.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 293.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 290.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 288.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 285.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 285.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 284.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 283.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 281.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 281.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 280.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 278.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 269.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 267.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 265.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 264.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 263.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 262.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 256.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 256.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 255.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 253.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 252.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 251.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 250.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 250.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 249.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 249.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 246.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 246.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 245.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 245.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 245.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 242.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 242.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 242.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 242.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 242.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 242.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 242.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 242.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 241.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 240.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 240.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 240.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 239.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 239.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 239.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 238.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 237.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 237.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 237.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 236.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 236.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 236.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 236.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 235.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 235.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 235.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 234.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 234.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 233.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 233.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 232.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 231.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 231.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 230.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 229.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 229.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 229.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 228.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 227.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 227.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 226.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 226.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 225.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 224.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 224.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 224.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 223.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 223.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 222.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 222.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 221.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 221.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 219.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 219.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 218.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 218.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 217.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 217.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 217.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 216.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 216.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 215.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 215.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 214.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 214.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 214.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 214.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 213.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 213.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 213.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 213.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 213.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 213.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 213.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 211.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 209.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 208.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 208.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 207.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 207.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 207.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 207.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 207.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 207.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 207.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 207.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 206.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 206.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 206.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 205.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 205.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 205.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 205.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 205.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 204.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 204.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 204.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 204.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 203.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 202.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 202.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 202.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 202.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 201.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 200.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 199.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 198.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 198.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 196.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 196.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 195.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 195.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 195.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 195.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 195.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 194.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 194.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 193.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 193.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 192.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 191.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 191.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 191.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 190.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 190.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 189.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 188.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 188.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 188.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 188.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 188.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 188.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 187.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 187.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 187.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 186.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 186.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 185.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 185.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 185.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 184.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 184.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 184.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 184.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 183.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 183.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 183.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 182.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 181.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 180.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 180.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 178.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 178.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 178.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 176.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 176.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 174.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 174.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 174.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 173.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 173.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 172.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 172.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 172.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 171.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 170.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 169.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 169.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 167.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 167.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 166.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 166.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 165.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 165.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 164.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 164.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 162.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 161.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 160.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 160.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 159.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 159.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 159.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 159.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 158.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 158.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 158.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 157.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 155.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 154.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 153.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 153.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 153.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 150.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 150.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 144.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 142.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 140.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 140.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 138.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 138.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 134.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 134.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 130.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 129.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 127.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 126.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 115.9
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Brain - Putamen (basal ganglia)
Average nTPM: 191.2
Samples: 205

Max nTPM: 289.9
Min nTPM: 128.3
Std nTPM: 30.3
Median nTPM: 188.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 289.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 288.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 283.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 268.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 265.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 262.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 258.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 256.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 255.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 247.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 242.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 240.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 240.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 239.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 236.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 235.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 234.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 233.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 233.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 232.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 232.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 231.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 230.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 230.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 229.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 229.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 226.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 223.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 221.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 221.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 221.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 219.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 219.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 219.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 219.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 218.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 217.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 216.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 216.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 216.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 216.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 216.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 214.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 214.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 213.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 213.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 211.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 211.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 211.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 211.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 211.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 210.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 209.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 209.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 207.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 206.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 206.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 205.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 205.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 204.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 204.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 203.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 203.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 203.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 203.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 202.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 201.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 201.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 201.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 200.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 200.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 200.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 198.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 198.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 198.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 197.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 197.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 197.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 197.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 196.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 196.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 195.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 194.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 194.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 194.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 193.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 193.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 193.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 193.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 192.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 192.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 192.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 192.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 191.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 191.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 191.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 191.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 190.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 190.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 189.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 188.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 188.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 188.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 188.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 188.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 187.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 187.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 187.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 187.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 185.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 185.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 185.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 185.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 184.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 184.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 183.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 182.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 181.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 181.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 180.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 179.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 179.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 179.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 179.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 179.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 178.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 178.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 178.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 177.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 177.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 176.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 176.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 176.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 176.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 175.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 175.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 175.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 175.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 175.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 174.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 173.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 173.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 173.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 172.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 172.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 172.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 172.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 172.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 171.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 170.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 170.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 169.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 169.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 169.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 168.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 168.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 167.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 166.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 166.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 166.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 166.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 166.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 166.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 165.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 165.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 164.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 163.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 161.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 160.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 160.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 160.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 159.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 159.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 158.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 158.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 157.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 157.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 156.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 156.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 156.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 156.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 156.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 155.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 155.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 155.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 155.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 155.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 154.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 154.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 153.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 153.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 153.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 152.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 151.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 151.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 149.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 148.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 146.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 144.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 144.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 142.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 138.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 137.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 135.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 128.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

193.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 158.3
FF:10164-103B2 76 years, female 158.3
Nucleus accumbens
Scaled Tags Per Million: 193.1
FF:10037-101F1 23-56 years, mixed 193.1
Putamen
Scaled Tags Per Million: 167.2
FF:10176-103C5 60 years, female 167.2
Globus pallidus
Scaled Tags Per Million: 140.6
FF:10175-103C4 60 years, female 160.0
FF:10161-103A8 76 years, female 121.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

248.8
Pig sample Sample description nTPM
Caudate
nTPM: 215.0
Samples: 4

Max nTPM: 234.7
Min nTPM: 193.6
Sample A Female 234.7
Sample B Female 193.6
Sample C Male 229.9
Sample D Male 201.6
Putamen
nTPM: 248.8
Samples: 4

Max nTPM: 308.1
Min nTPM: 210.7
Sample A Female 249.2
Sample B Female 210.7
Sample C Male 308.1
Sample D Male 227.1
Septum
nTPM: 236.6
Samples: 4

Max nTPM: 268.4
Min nTPM: 205.4
Sample A Female 268.4
Sample B Female 238.3
Sample C Male 205.4
Sample D Male 234.1
Ventral pallidum
nTPM: 210.5
Samples: 4

Max nTPM: 243.1
Min nTPM: 165.9
Sample A Female 219.8
Sample B Female 243.1
Sample C Male 165.9
Sample D Male 213.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

394.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 358.4
Samples: 4

Max nTPM: 383.6
Min nTPM: 325.0
Sample A Male 356.8
Sample B Male 325.0
Sample C Female 368.1
Sample D Female 383.6
Septum
nTPM: 394.5
Samples: 4

Max nTPM: 474.9
Min nTPM: 337.1
Sample A Male 337.1
Sample B Male 474.9
Sample C Female 402.5
Sample D Female 363.5
Ventral forebrain
nTPM: 329.1
Samples: 4

Max nTPM: 388.6
Min nTPM: 298.6
Sample A Male 315.9
Sample B Male 298.6
Sample C Female 388.6
Sample D Female 313.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.5
74990518 Antisense, RP_060410_01_B12, Mouse strain C57BL/6J (56 days, male) 13.5
Pallidum
Expression energy: 10.5
74990518 Antisense, RP_060410_01_B12, Mouse strain C57BL/6J (56 days, male) 10.5

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