PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:144.2 nTPM
FANTOM5:144.7 Scaled Tags Per Million
Pig:240.6 nTPM
Mouse:228.7 nTPM
Allen mouse:6.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 144.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 126.2
2301 Female, age 85, both hemispheres 141.2
1984 Male, age 76, both hemispheres 126.7
2188 Female, age 91, both hemispheres 122.8
2090 Male, age 80, both hemispheres 114.2
Area postrema
nTPM: 117.8
2306 Male, age 80, both hemispheres 128.2
2799 Male, age 61, both hemispheres 118.1
2054 Male, age 76, both hemispheres 107.0
Dorsal cochlear nucleus
nTPM: 124.4
2187 Female, age 91, both hemispheres 135.9
2802 Male, age 74, right hemisphere 131.8
2378 Male, age 80, both hemispheres 125.8
2370 Male, age 61, both hemispheres 115.4
2058 Male, age 76, both hemispheres 113.0
Dorsal medullary reticular nucleus
nTPM: 112.2
2040 Female, age 85, both hemispheres 121.6
2373 Male, age 61, both hemispheres 117.9
2088 Male, age 76, both hemispheres 97.1
Dorsal motor vagal complex
nTPM: 113.6
2813 Female, age 72, unknown 133.0
2185 Male, age 76, both hemispheres 120.8
2133 Female, age 91, both hemispheres 115.5
2844 Male, age 55, unknown 114.0
2807 Female, age 85, both hemispheres 107.4
2643 Male, age 74, both hemispheres 106.6
2000 Male, age 74, unknown 106.4
2797 Male, age 61, both hemispheres 105.0
Dorsal tegmental nucleus
nTPM: 130.2
2358 Male, age 61, both hemispheres 149.1
2326 Male, age 74, both hemispheres 140.0
2083 Male, age 80, both hemispheres 117.1
1936 Male, age 76, left hemisphere 114.3
Dorsolateral tegmental area
nTPM: 131.6
2337 Male, age 61, both hemispheres 149.0
2360 Male, age 74, both hemispheres 134.5
2751 Female, age 85, both hemispheres 133.0
2654 Male, age 80, both hemispheres 126.4
2141 Male, age 76, both hemispheres 115.1
Gigantocellular reticular nuclei, medullary
nTPM: 120.9
2314 Male, age 61, both hemispheres 127.6
2022 Male, age 76, right hemisphere 126.4
1876 Female, age 85, both hemispheres 123.8
2462 Male, age 74, both hemispheres 119.2
2387 Female, age 91, both hemispheres 118.0
2310 Male, age 80, both hemispheres 110.4
Gigantocellular reticular nuclei, pars
nTPM: 105.9
2336 Male, age 61, both hemispheres 118.0
2084 Female, age 85, both hemispheres 108.3
2168 Male, age 76, both hemispheres 105.2
2330 Male, age 80, both hemispheres 101.0
2706 Male, age 80, both hemispheres 97.3
Inferior olive
nTPM: 126.9
2563 Male, age 74, both hemispheres 136.9
2085 Female, age 85, both hemispheres 127.5
2178 Male, age 61, both hemispheres 126.9
2628 Female, age 91, both hemispheres 123.9
2379 Male, age 80, both hemispheres 119.5
Kolliker-Fuse nucleus
nTPM: 132.0
2315 Male, age 76, right hemisphere 151.8
2793 Female, age 91, left hemisphere 126.2
2163 Male, age 80, both hemispheres 118.0
Lateral lemniscal nuclei
nTPM: 109.4
2169 Male, age 76, both hemispheres 125.8
2453 Male, age 74, right hemisphere 109.3
2746 Female, age 85, left hemisphere 108.7
2320 Female, age 91, left hemisphere 103.5
2036 Male, age 80, both hemispheres 99.6
Lateral medullary reticular nucleus
nTPM: 130.6
2305 Male, age 74, both hemispheres 171.0
2190 Female, age 85, both hemispheres 135.5
2374 Male, age 61, both hemispheres 131.3
2804 Female, age 91, both hemispheres 117.5
2852 Male, age 80, both hemispheres 115.7
2044 Male, age 76, both hemispheres 112.6
Lateral parabrachial nucleus
nTPM: 120.7
2792 Male, age 76, both hemispheres 141.4
2139 Female, age 85, right hemisphere 125.0
2013 Male, age 80, both hemispheres 116.6
2790 Male, age 61, both hemispheres 99.8
Lateral vestibular nucleus
nTPM: 117.2
2311 Male, age 80, both hemispheres 130.4
2184 Male, age 76, both hemispheres 104.0
Locus coeruleus
nTPM: 120.9
2788 Male, age 74, unknown 139.6
2123 Female, age 91, both hemispheres 129.4
2014 Male, age 55, unknown 120.9
2720 Male, age 74, both hemispheres 119.4
2317 Female, age 72, unknown 116.6
2162 Male, age 80, both hemispheres 113.7
1980 Male, age 76, both hemispheres 106.8
Medial olivary nucleus
nTPM: 140.6
1962 Male, age 76, both hemispheres 154.0
1943 Male, age 61, both hemispheres 141.9
2138 Female, age 91, both hemispheres 140.6
2851 Male, age 80, both hemispheres 126.2
Medial parabrachial nucleus
nTPM: 124.3
2170 Female, age 91, both hemispheres 156.3
2854 Male, age 80, both hemispheres 123.9
2786 Male, age 76, both hemispheres 121.0
2463 Female, age 85, right hemisphere 115.4
2156 Male, age 61, both hemispheres 104.8
Medial periolivary nuclei
nTPM: 115.4
2791 Male, age 74, right hemisphere 138.6
2063 Male, age 76, both hemispheres 120.8
2171 Female, age 85, both hemispheres 107.2
2081 Male, age 80, both hemispheres 105.9
2458 Female, age 91, both hemispheres 104.6
Medial vestibular nucleus
nTPM: 119.9
2801 Male, age 74, both hemispheres 140.9
2624 Male, age 61, both hemispheres 123.7
2803 Female, age 91, both hemispheres 123.1
2743 Female, age 85, both hemispheres 120.3
2093 Male, age 80, both hemispheres 107.3
2134 Male, age 76, both hemispheres 104.3
Motor facial nucleus
nTPM: 114.8
2365 Male, age 74, right hemisphere 148.9
2062 Male, age 76, both hemispheres 116.1
2327 Male, age 80, both hemispheres 107.6
2126 Male, age 61, both hemispheres 106.1
2697 Female, age 85, both hemispheres 105.6
2795 Female, age 91, both hemispheres 104.6
Motor hypoglossal nucleus
nTPM: 114.8
2125 Female, age 91, both hemispheres 125.7
2461 Male, age 61, both hemispheres 125.1
2182 Male, age 80, both hemispheres 115.7
2132 Female, age 85, both hemispheres 113.1
2277 Male, age 76, both hemispheres 94.4
Motor trigeminal nucleus
nTPM: 109.9
2560 Male, age 74, both hemispheres 117.6
2335 Male, age 61, both hemispheres 115.7
2309 Male, age 76, both hemispheres 113.7
2321 Female, age 91, both hemispheres 105.3
2079 Male, age 80, both hemispheres 97.2
Nuclei of the trapezoid body
nTPM: 109.0
1983 Male, age 76, both hemispheres 132.9
2159 Male, age 61, both hemispheres 104.4
2166 Male, age 80, both hemispheres 103.0
2735 Female, age 85, both hemispheres 102.8
2368 Female, age 91, both hemispheres 101.9
Nucleus ambiguus
nTPM: 101.8
2071 Male, age 76, both hemispheres 142.4
2096 Female, age 85, both hemispheres 61.1
Nucleus cuneatus
nTPM: 113.4
2381 Male, age 80, both hemispheres 131.0
2564 Male, age 74, both hemispheres 126.5
2380 Male, age 80, both hemispheres 126.3
2808 Female, age 85, both hemispheres 125.5
2376 Male, age 61, both hemispheres 117.5
2562 Male, age 61, both hemispheres 107.3
2805 Female, age 91, both hemispheres 100.2
2131 Male, age 76, both hemispheres 96.1
2100 Male, age 76, both hemispheres 90.6
Nucleus gracilis
nTPM: 134.1
2627 Male, age 74, both hemispheres 159.4
2299 Female, age 85, both hemispheres 123.9
2382 Male, age 80, both hemispheres 118.9
Nucleus raphe magnus
nTPM: 112.0
2455 Male, age 74, both hemispheres 128.8
2160 Male, age 61, both hemispheres 119.0
2051 Male, age 76, both hemispheres 118.7
2328 Male, age 80, both hemispheres 108.0
2459 Female, age 91, both hemispheres 99.0
2172 Female, age 85, both hemispheres 98.4
Nucleus raphe obscurus
nTPM: 130.9
2845 Female, age 85, midline 138.4
2142 Male, age 76, midline 137.5
2800 Male, age 61, midline 116.9
Nucleus raphe pallidus
nTPM: 140.7
2145 Male, age 76, midline 148.5
1924 Male, age 61, midline 144.8
2183 Male, age 80, midline 128.7
Nucleus tractus solitarii
nTPM: 122.4
2144 Female, age 91, right hemisphere 148.9
2191 Female, age 85, both hemispheres 131.1
2656 Male, age 76, both hemispheres 113.8
2307 Male, age 80, both hemispheres 95.8
Paramedian reticular nucleus
nTPM: 122.2
2052 Male, age 76, both hemispheres 154.9
2050 Female, age 85, both hemispheres 115.1
2313 Male, age 61, both hemispheres 113.3
2057 Male, age 80, both hemispheres 105.4
Parvicellular reticular nuclei
nTPM: 108.1
2095 Male, age 76, both hemispheres 119.2
2119 Male, age 80, both hemispheres 112.4
2558 Male, age 74, both hemispheres 92.8
Parvicellular reticular nuclei, medullary
nTPM: 113.2
2189 Female, age 91, both hemispheres 118.0
2181 Male, age 80, left hemisphere 113.4
2091 Female, age 85, both hemispheres 108.3
Pedunculopontine tegmental nucleus
nTPM: 142.3
2338 Male, age 61, both hemispheres 166.5
2334 Male, age 80, both hemispheres 138.9
1921 Female, age 85, both hemispheres 121.5
Peritrigeminal nucleus
nTPM: 128.6
2067 Female, age 85, both hemispheres 130.0
2136 Male, age 76, both hemispheres 129.4
2179 Male, age 61, both hemispheres 126.4
Pontine nuclei
nTPM: 118.8
2454 Male, age 74, left hemisphere 150.3
1863 Male, age 55, unknown 133.7
2319 Female, age 91, both hemispheres 131.3
2787 Female, age 85, both hemispheres 113.9
2109 Female, age 72, unknown 110.9
2727 Male, age 61, right hemisphere 107.3
1968 Male, age 76, left hemisphere 105.4
2115 Male, age 80, left hemisphere 97.5
Pontine raphe nucleus
nTPM: 116.9
2853 Male, age 76, midline 117.9
2122 Female, age 85, midline 115.9
Posteroventral cochlear nucleus
nTPM: 123.7
2341 Male, age 80, both hemispheres 143.6
2135 Female, age 91, both hemispheres 125.0
2371 Male, age 61, both hemispheres 118.8
2752 Female, age 85, both hemispheres 116.3
2070 Male, age 76, both hemispheres 114.5
Prepositus hypoglossal nucleus
nTPM: 113.7
2855 Female, age 85, right hemisphere 115.7
2086 Male, age 80, both hemispheres 111.8
Principal sensory trigeminal nucleus
nTPM: 114.1
2367 Female, age 91, left hemisphere 128.3
2324 Male, age 76, both hemispheres 118.9
2158 Male, age 61, both hemispheres 106.0
2008 Male, age 80, left hemisphere 103.0
Reticular pontine nucleus, caudal
nTPM: 119.4
2559 Male, age 74, both hemispheres 131.6
2092 Male, age 76, both hemispheres 125.0
2457 Female, age 91, both hemispheres 122.5
2332 Male, age 80, right hemisphere 98.5
Reticular pontine nucleus, oral
nTPM: 124.1
2366 Female, age 91, both hemispheres 132.1
2361 Male, age 74, both hemispheres 131.5
1939 Male, age 80, both hemispheres 119.9
2012 Female, age 85, both hemispheres 119.9
2167 Male, age 76, both hemispheres 117.2
Reticulotegmental nucleus
nTPM: 113.5
2322 Female, age 91, both hemispheres 121.7
2333 Male, age 80, both hemispheres 112.0
2325 Male, age 76, both hemispheres 111.6
2452 Male, age 74, both hemispheres 108.5
Spinal trigeminal nucleus, caudal
nTPM: 116.2
2312 Male, age 61, both hemispheres 130.4
2390 Female, age 91, both hemispheres 123.8
2308 Male, age 80, both hemispheres 113.3
2642 Male, age 74, both hemispheres 107.8
2447 Male, age 76, both hemispheres 105.6
Spinal trigeminal nucleus, interpolar
nTPM: 120.4
2386 Female, age 85, both hemispheres 127.8
2033 Male, age 80, both hemispheres 123.8
2389 Female, age 91, both hemispheres 120.6
2625 Male, age 61, both hemispheres 116.1
2066 Male, age 76, right hemisphere 113.9
Spinal trigeminal nucleus, oral
nTPM: 115.0
1978 Male, age 76, both hemispheres 124.1
2737 Female, age 85, both hemispheres 118.2
2164 Male, age 80, both hemispheres 102.7
Spinal vestibular nucleus
nTPM: 119.8
2806 Female, age 85, both hemispheres 129.5
2186 Female, age 91, both hemispheres 126.6
2384 Male, age 74, both hemispheres 120.8
2796 Male, age 61, both hemispheres 118.2
2748 Male, age 76, both hemispheres 114.8
2780 Male, age 80, both hemispheres 108.9
Subcoeruleus area
nTPM: 123.1
2369 Female, age 85, left hemisphere 136.6
2323 Female, age 91, left hemisphere 130.3
1958 Male, age 80, both hemispheres 127.6
2451 Male, age 74, both hemispheres 121.0
2089 Male, age 76, left hemisphere 100.2
Superior olive
nTPM: 119.7
2364 Male, age 74, right hemisphere 149.2
1875 Female, age 85, both hemispheres 119.0
2020 Male, age 76, both hemispheres 119.0
2329 Male, age 80, right hemisphere 108.4
2561 Female, age 91, both hemispheres 103.1
Superior vestibular nucleus
nTPM: 144.2
2383 Male, age 74, both hemispheres 190.9
2015 Male, age 80, both hemispheres 121.4
2061 Male, age 76, both hemispheres 120.2
Ventral medullary reticular nucleus
nTPM: 114.3
2372 Male, age 61, both hemispheres 122.9
2060 Male, age 76, both hemispheres 105.8
Ventral periolivary nuclei
nTPM: 113.2
2023 Male, age 76, both hemispheres 126.6
2130 Female, age 85, both hemispheres 120.7
2165 Male, age 80, both hemispheres 113.1
2794 Female, age 91, left hemisphere 92.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 123.8
2180 Male, age 61, both hemispheres 126.0
2302 Female, age 91, both hemispheres 125.4
2741 Female, age 85, both hemispheres 125.0
1986 Male, age 76, both hemispheres 121.9
2118 Male, age 80, both hemispheres 121.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 117.6
2359 Male, age 61, both hemispheres 132.8
2840 Female, age 85, both hemispheres 123.0
2161 Male, age 80, both hemispheres 118.2
2449 Male, age 74, both hemispheres 117.7
1959 Male, age 76, both hemispheres 107.3
2456 Female, age 91, both hemispheres 106.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 144.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 144.7
FF:10182-103D2 60 years, female 165.8
FF:10165-103B3 76 years, female 123.5
Medulla oblongata
Scaled Tags Per Million: 139.8
FF:10038-101F2 18-64 years, mixed 155.5
FF:10174-103C3 60 years, female 151.5
FF:10155-103A2 76 years, female 112.4
Pons
Scaled Tags Per Million: 135.0
FF:10033-101E6 18-54 years, mixed 135.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 240.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 215.6
Samples: 4

Max nTPM: 261.4
Min nTPM: 190.5
Sample A Female 209.6
Sample B Female 190.5
Sample C Male 201.0
Sample D Male 261.4
Pons
nTPM: 240.6
Samples: 4

Max nTPM: 291.7
Min nTPM: 188.8
Sample A Female 291.7
Sample B Female 188.8
Sample C Male 242.3
Sample D Male 239.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 228.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 228.7
Samples: 4

Max nTPM: 239.9
Min nTPM: 220.9
Sample A Male 227.8
Sample B Male 220.9
Sample C Female 226.3
Sample D Female 239.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.8
74990518 Antisense, RP_060410_01_B12, Mouse strain C57BL/6J (56 days, male) 6.8
Pons
Expression energy: 6.9
74990518 Antisense, RP_060410_01_B12, Mouse strain C57BL/6J (56 days, male) 6.9

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