We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
39.7
nTPM
HPA Brain:
75.7
nTPM
GTEx:
39.7
nTPM
FANTOM5:
68.0
Scaled Tags Per Million
Mouse:
9.6
nTPM
Allen mouse:
0.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.7
Sample id
Sample description
nTPM
Amygdala nTPM: 75.7
2814
Male, age 76, right hemisphere
85.2
2514
Male, age 75, right hemisphere
83.8
2695
Female, age 67, right hemisphere
81.2
1987
Female, age 91, left hemisphere
65.3
2517
Female, age 94, left hemisphere
63.0
Basal amygdala nTPM: 57.0
2110
Male, age 80, left hemisphere
62.1
2609
Male, age 75, right hemisphere
60.3
1955
Male, age 76, both hemispheres
58.9
2827
Female, age 67, right hemisphere
58.1
2685
Female, age 94, left hemisphere
55.9
2243
Female, age 91, right hemisphere
47.0
Central amygdala nTPM: 60.6
1905
Male, age 76, both hemispheres
68.5
2239
Male, age 80, left hemisphere
64.0
2701
Female, age 91, right hemisphere
62.3
2515
Male, age 75, right hemisphere
58.3
2826
Female, age 94, left hemisphere
50.0
Corticomedial amygdala nTPM: 54.5
2428
Male, age 75, right hemisphere
71.2
2429
Female, age 94, left hemisphere
58.2
2240
Male, age 76, both hemispheres
55.9
2829
Male, age 80, left hemisphere
49.9
2242
Female, age 91, right hemisphere
48.8
2535
Female, age 67, right hemisphere
43.1
Lateral amygdala nTPM: 61.9
2830
Female, age 67, right hemisphere
68.9
2256
Male, age 80, left hemisphere
67.8
1883
Male, age 76, both hemispheres
66.3
2516
Male, age 75, right hemisphere
61.8
2255
Female, age 91, right hemisphere
57.5
2534
Female, age 94, left hemisphere
49.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
39.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 39.7
Samples: 152
Max nTPM: 102.3
Min nTPM: 15.7
Std nTPM: 14.0
Median nTPM: 38.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
102.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
91.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
87.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
78.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
70.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
69.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
68.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
68.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
60.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
59.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
59.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
58.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
55.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
55.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
55.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
55.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
55.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
54.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
54.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
54.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
53.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
52.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
51.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
51.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
50.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
49.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
49.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
49.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
49.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
48.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
48.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
48.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
47.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
47.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
47.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
46.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
46.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
46.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
46.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
46.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
45.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
45.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
45.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
44.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
44.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
43.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
43.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
43.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
43.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
43.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
42.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
42.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
42.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
42.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
41.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
41.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
41.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
41.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
41.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
41.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
40.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
40.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
40.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
40.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
39.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
39.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
38.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
38.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
38.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
38.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
38.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
38.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
37.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
37.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
37.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
37.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
37.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
37.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
36.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
36.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
35.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
35.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
35.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
35.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
34.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
34.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
34.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
34.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
34.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
33.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
33.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
33.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
33.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
33.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
32.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
32.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
32.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
32.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
32.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
32.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
32.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
32.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
32.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
32.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
31.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
31.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
30.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
30.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
30.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
30.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
29.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
29.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
29.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
28.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
28.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
28.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
27.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
27.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
26.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
26.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
26.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
26.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
25.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
25.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
24.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
24.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
23.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
23.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
23.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
23.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
23.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
23.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
23.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
22.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
22.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
22.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
22.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
21.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
20.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
20.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
19.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
19.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
19.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
19.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
15.7
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 9.6
Samples: 4
Max nTPM: 11.6
Min nTPM: 8.0
Sample A
Male
8.0
Sample B
Male
9.2
Sample C
Female
11.6
Sample D
Female
9.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
