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SERPINA3
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:116.9 nTPM
HPA Brain:108.3 nTPM
GTEx:116.9 nTPM
FANTOM5:1023.9 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:0.0 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000893Antibody HPA002560Antibody CAB016647
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 76.7
1781 Male, age 74, unknown 198.3
2481 Female, age 94, left hemisphere 102.7
1854 Male, age 80, left hemisphere 97.7
2289 Male, age 61, right hemisphere 74.9
1857 Female, age 85, left hemisphere 65.8
2846 Female, age 79, unknown 43.8
2290 Female, age 72, unknown 23.6
2288 Male, age 75, left hemisphere 6.7
Globus pallidus, externus
nTPM: 76.4
1996 Male, age 80, right hemisphere 164.2
2772 Female, age 79, unknown 73.1
2395 Male, age 75, both hemispheres 71.6
2646 Male, age 61, right hemisphere 38.0
2567 Female, age 72, unknown 35.2
Globus pallidus, internus
nTPM: 108.3
2483 Female, age 94, right hemisphere 185.5
2037 Male, age 80, right hemisphere 152.2
2566 Female, age 72, unknown 117.0
2111 Female, age 85, right hemisphere 88.2
1818 Male, age 74, unknown 83.9
2778 Female, age 91, both hemispheres 65.9
2287 Male, age 75, right hemisphere 65.7
Nucleus accumbens
nTPM: 43.7
2732 Male, age 80, right hemisphere 82.5
2391 Female, age 94, left hemisphere 65.3
2698 Female, age 72, unknown 61.1
1806 Female, age 85, left hemisphere 50.3
1856 Female, age 91, right hemisphere 36.2
1783 Male, age 74, unknown 35.4
2286 Male, age 75, left hemisphere 13.4
2824 Male, age 61, right hemisphere 5.2
Nucleus basalis of Meynert
nTPM: 55.5
2393 Male, age 80, right hemisphere 107.5
2484 Female, age 94, left hemisphere 56.0
2569 Male, age 61, both hemispheres 34.8
2821 Male, age 75, both hemispheres 23.6
Nucleus of the diagonal band
nTPM: 38.6
1812 Female, age 91, both hemispheres 88.9
2775 Male, age 80, right hemisphere 38.3
1979 Male, age 74, unknown 33.3
2029 Male, age 61, right hemisphere 20.2
2195 Female, age 85, both hemispheres 12.2
Putamen
nTPM: 73.5
2482 Female, age 94, left hemisphere 216.3
2489 Female, age 72, unknown 111.9
1838 Male, age 80, right hemisphere 74.7
1829 Male, age 74, unknown 38.8
1937 Female, age 91, right hemisphere 36.2
2466 Female, age 79, unknown 31.2
2647 Male, age 75, left hemisphere 5.3
Septal nuclei
nTPM: 63.5
2199 Male, age 80, right hemisphere 122.9
2629 Female, age 94, right hemisphere 87.7
2394 Male, age 61, left hemisphere 83.5
2009 Female, age 91, both hemispheres 63.4
2031 Female, age 72, unknown 40.0
2059 Female, age 85, both hemispheres 33.9
1960 Male, age 74, unknown 13.3
Stria terminalis, bed nucleus
nTPM: 29.2
1974 Female, age 91, both hemispheres 38.3
2201 Male, age 74, unknown 32.0
2486 Female, age 94, both hemispheres 17.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 107.3
Samples: 246

Max nTPM: 1604.4
Min nTPM: 0.5
Std nTPM: 211.3
Median nTPM: 21.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1604.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1109.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1027.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 977.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 968.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 843.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 749.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 730.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 649.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 630.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 544.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 500.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 454.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 437.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 433.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 424.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 422.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 419.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 408.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 407.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 396.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 394.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 394.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 392.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 385.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 380.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 362.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 331.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 326.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 323.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 282.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 276.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 242.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 235.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 221.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 216.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 203.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 199.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 187.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 184.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 183.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 175.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 173.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 169.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 146.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 144.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 143.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 143.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 142.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 139.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 136.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 135.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 134.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 117.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 114.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 112.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 108.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 106.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 105.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 104.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 101.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 89.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 84.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 83.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 82.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 82.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 79.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 77.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 75.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 70.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 63.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 63.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 60.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 54.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 54.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 50.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 50.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 47.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 47.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 47.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 45.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 43.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 42.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 38.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 38.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 38.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 35.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 34.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 34.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 33.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 33.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 33.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 32.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 32.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 32.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 31.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 29.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 29.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 27.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 27.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 26.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 26.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 26.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 25.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 25.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 24.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 23.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 23.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 23.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 22.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 22.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 22.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 22.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 21.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 21.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 21.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 21.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 21.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 21.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 20.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 20.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 20.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 20.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 20.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 20.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 19.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 19.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 18.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 17.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 17.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 16.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 16.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 15.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 15.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 14.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 14.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 14.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 13.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 13.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 13.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 12.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 12.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 12.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 12.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 12.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 12.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 12.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 12.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 11.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 11.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 11.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 11.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 11.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 11.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 11.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 11.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 11.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 10.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 10.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 10.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 10.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 10.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 9.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 9.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 9.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 9.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 9.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 9.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 8.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 8.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 8.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 8.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 8.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 8.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 8.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 8.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 8.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 8.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 8.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 7.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 7.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 7.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 7.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 7.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 7.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 7.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 7.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 7.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 7.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 6.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 6.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 6.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 6.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 6.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 6.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 6.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 6.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 6.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 5.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 5.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 5.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 5.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 5.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 5.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 5.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 4.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 4.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 4.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 4.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 4.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 4.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 4.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 4.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 4.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 4.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 4.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 3.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 3.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 3.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 2.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 2.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 0.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 98.4
Samples: 246

Max nTPM: 1464.6
Min nTPM: 0.7
Std nTPM: 199.1
Median nTPM: 16.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1464.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1188.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 871.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 823.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 816.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 805.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 782.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 758.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 755.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 578.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 532.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 524.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 521.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 464.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 431.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 394.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 356.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 344.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 338.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 335.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 331.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 330.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 317.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 305.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 301.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 286.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 281.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 280.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 266.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 266.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 266.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 263.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 262.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 237.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 233.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 222.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 216.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 208.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 208.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 155.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 148.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 147.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 146.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 143.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 141.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 138.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 131.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 128.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 123.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 122.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 121.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 121.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 116.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 115.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 115.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 111.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 106.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 105.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 101.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 98.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 94.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 88.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 88.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 87.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 82.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 77.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 76.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 76.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 74.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 73.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 71.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 69.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 69.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 69.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 67.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 66.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 62.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 53.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 53.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 52.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 51.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 45.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 44.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 43.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 42.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 39.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 39.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 38.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 38.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 37.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 33.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 32.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 31.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 31.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 30.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 30.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 29.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 28.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 26.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 25.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 24.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 24.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 23.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 22.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 22.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 22.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 21.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 21.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 20.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 20.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 19.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 19.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 19.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 18.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 18.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 18.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 18.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 17.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 17.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 17.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 17.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 17.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 16.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 16.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 15.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 15.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 14.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 14.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 14.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 13.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 13.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 13.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 13.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 12.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 12.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 12.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 11.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 11.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 11.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 11.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 11.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 11.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 11.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 11.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 10.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 10.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 10.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 10.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 10.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 9.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 9.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 9.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 9.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 9.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 8.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 8.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 8.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 7.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 7.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 7.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 7.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 7.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 7.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 7.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 7.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 7.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 7.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 7.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 7.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 6.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 6.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 6.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 6.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 5.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 5.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 5.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 5.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 5.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 5.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 5.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 5.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 5.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 5.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 5.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 5.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 5.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 5.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 5.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 5.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 4.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 4.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 4.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 4.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 4.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 4.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 4.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 4.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 3.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 3.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 3.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 3.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 3.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 3.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 3.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 3.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 3.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 3.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 3.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 2.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 2.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 2.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 2.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 2.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 2.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 2.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 2.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 2.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 2.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 2.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 2.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 2.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 2.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 2.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 2.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 2.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 0.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 0.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 116.9
Samples: 205

Max nTPM: 1795.2
Min nTPM: 0.8
Std nTPM: 237.8
Median nTPM: 20.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1795.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1349.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 946.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 915.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 835.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 821.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 816.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 771.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 751.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 590.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 565.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 562.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 549.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 549.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 524.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 501.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 487.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 455.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 422.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 360.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 351.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 330.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 300.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 295.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 295.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 282.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 268.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 251.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 245.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 244.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 224.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 221.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 205.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 201.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 192.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 189.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 187.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 185.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 181.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 164.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 160.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 159.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 158.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 155.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 143.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 141.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 136.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 128.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 118.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 114.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 103.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 78.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 78.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 73.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 71.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 71.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 70.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 68.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 61.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 61.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 60.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 56.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 56.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 52.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 51.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 50.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 50.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 45.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 41.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 41.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 41.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 40.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 40.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 39.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 39.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 36.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 36.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 36.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 35.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 33.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 32.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 29.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 28.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 28.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 28.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 27.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 27.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 26.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 26.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 24.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 23.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 23.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 23.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 22.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 22.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 21.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 21.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 20.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 20.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 19.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 19.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 18.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 18.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 17.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 17.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 16.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 16.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 15.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 15.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 14.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 14.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 14.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 13.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 13.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 13.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 12.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 12.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 12.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 12.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 11.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 11.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 11.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 11.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 11.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 10.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 9.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 9.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 9.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 8.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 8.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 8.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 7.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 7.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 7.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 7.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 7.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 7.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 6.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 5.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 5.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 5.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 5.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 5.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 5.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 5.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 5.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 5.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 4.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 4.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 4.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 4.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 4.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 4.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 4.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 3.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 3.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 3.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 3.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 3.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 3.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 3.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 3.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 0.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1023.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 500.6
FF:10164-103B2 76 years, female 500.6
Nucleus accumbens
Scaled Tags Per Million: 54.2
FF:10037-101F1 23-56 years, mixed 54.2
Putamen
Scaled Tags Per Million: 139.4
FF:10176-103C5 60 years, female 139.4
Globus pallidus
Scaled Tags Per Million: 1023.9
FF:10175-103C4 60 years, female 1065.7
FF:10161-103A8 76 years, female 982.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Caudate
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Putamen
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Septum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral pallidum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 8.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.2
Sample A Male 9.3
Sample B Male 8.2
Sample C Female 8.5
Sample D Female 9.6
Septum
nTPM: 28.7
Samples: 4

Max nTPM: 29.5
Min nTPM: 28.0
Sample A Male 28.4
Sample B Male 29.5
Sample C Female 28.9
Sample D Female 28.0
Ventral forebrain
nTPM: 14.3
Samples: 4

Max nTPM: 18.5
Min nTPM: 12.2
Sample A Male 13.2
Sample B Male 18.5
Sample C Female 12.2
Sample D Female 13.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Striatum
Expression energy: 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.0

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