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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
983.1
nTPM
FANTOM5:
1076.9
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
983.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 668.2
2188
Female, age 91, both hemispheres
819.1
2301
Female, age 85, both hemispheres
683.5
2090
Male, age 80, both hemispheres
597.6
1984
Male, age 76, both hemispheres
572.5
Dorsal cochlear nucleus nTPM: 578.7
2187
Female, age 91, both hemispheres
732.1
2802
Male, age 74, right hemisphere
698.3
2058
Male, age 76, both hemispheres
499.3
2378
Male, age 80, both hemispheres
495.6
2370
Male, age 61, both hemispheres
468.1
Dorsal tegmental nucleus nTPM: 638.4
2326
Male, age 74, both hemispheres
754.2
2083
Male, age 80, both hemispheres
717.3
1936
Male, age 76, left hemisphere
575.8
2358
Male, age 61, both hemispheres
506.5
Dorsolateral tegmental area nTPM: 612.9
2654
Male, age 80, both hemispheres
667.2
2751
Female, age 85, both hemispheres
654.0
2337
Male, age 61, both hemispheres
650.1
2360
Male, age 74, both hemispheres
583.5
2141
Male, age 76, both hemispheres
509.9
Kolliker-Fuse nucleus nTPM: 759.7
2793
Female, age 91, left hemisphere
896.1
2163
Male, age 80, both hemispheres
803.1
2315
Male, age 76, right hemisphere
579.9
Lateral lemniscal nuclei nTPM: 835.0
2036
Male, age 80, both hemispheres
1101.7
2169
Male, age 76, both hemispheres
941.5
2746
Female, age 85, left hemisphere
766.5
2453
Male, age 74, right hemisphere
738.8
2320
Female, age 91, left hemisphere
626.5
Lateral parabrachial nucleus nTPM: 707.7
2139
Female, age 85, right hemisphere
943.3
2013
Male, age 80, both hemispheres
707.5
2792
Male, age 76, both hemispheres
655.3
2790
Male, age 61, both hemispheres
524.7
Lateral vestibular nucleus nTPM: 650.3
2184
Male, age 76, both hemispheres
686.4
2311
Male, age 80, both hemispheres
614.2
Locus coeruleus nTPM: 802.9
2123
Female, age 91, both hemispheres
1047.0
2014
Male, age 55, unknown
893.8
2720
Male, age 74, both hemispheres
828.7
2788
Male, age 74, unknown
797.5
1980
Male, age 76, both hemispheres
756.2
2317
Female, age 72, unknown
671.2
2162
Male, age 80, both hemispheres
626.1
Medial parabrachial nucleus nTPM: 674.7
2170
Female, age 91, both hemispheres
858.0
2854
Male, age 80, both hemispheres
832.3
2786
Male, age 76, both hemispheres
586.8
2156
Male, age 61, both hemispheres
561.9
2463
Female, age 85, right hemisphere
534.3
Medial periolivary nuclei nTPM: 829.2
2171
Female, age 85, both hemispheres
1089.0
2063
Male, age 76, both hemispheres
937.4
2791
Male, age 74, right hemisphere
902.0
2081
Male, age 80, both hemispheres
613.9
2458
Female, age 91, both hemispheres
603.9
Motor facial nucleus nTPM: 815.1
2365
Male, age 74, right hemisphere
1047.2
2062
Male, age 76, both hemispheres
973.6
2697
Female, age 85, both hemispheres
925.5
2327
Male, age 80, both hemispheres
676.5
2126
Male, age 61, both hemispheres
645.7
2795
Female, age 91, both hemispheres
622.4
Motor trigeminal nucleus nTPM: 646.9
2560
Male, age 74, both hemispheres
772.5
2079
Male, age 80, both hemispheres
741.1
2335
Male, age 61, both hemispheres
615.2
2321
Female, age 91, both hemispheres
573.8
2309
Male, age 76, both hemispheres
532.2
Nuclei of the trapezoid body nTPM: 913.9
2159
Male, age 61, both hemispheres
1264.2
1983
Male, age 76, both hemispheres
1054.5
2735
Female, age 85, both hemispheres
977.2
2166
Male, age 80, both hemispheres
699.9
2368
Female, age 91, both hemispheres
573.6
Nucleus raphe magnus nTPM: 972.7
2160
Male, age 61, both hemispheres
1494.3
2172
Female, age 85, both hemispheres
1076.5
2455
Male, age 74, both hemispheres
990.9
2051
Male, age 76, both hemispheres
833.1
2328
Male, age 80, both hemispheres
761.6
2459
Female, age 91, both hemispheres
679.9
Paramedian reticular nucleus nTPM: 818.1
2050
Female, age 85, both hemispheres
1009.3
2313
Male, age 61, both hemispheres
809.2
2052
Male, age 76, both hemispheres
731.0
2057
Male, age 80, both hemispheres
722.9
Pedunculopontine tegmental nucleus nTPM: 713.7
2338
Male, age 61, both hemispheres
791.6
2334
Male, age 80, both hemispheres
741.4
1921
Female, age 85, both hemispheres
608.1
Pontine nuclei nTPM: 983.1
1863
Male, age 55, unknown
1294.3
2727
Male, age 61, right hemisphere
1273.2
2787
Female, age 85, both hemispheres
1179.9
2109
Female, age 72, unknown
987.2
2454
Male, age 74, left hemisphere
937.9
1968
Male, age 76, left hemisphere
912.4
2319
Female, age 91, both hemispheres
700.9
2115
Male, age 80, left hemisphere
579.3
Pontine raphe nucleus nTPM: 717.7
2122
Female, age 85, midline
882.1
2853
Male, age 76, midline
553.3
Posteroventral cochlear nucleus nTPM: 675.2
2752
Female, age 85, both hemispheres
787.2
2341
Male, age 80, both hemispheres
737.4
2135
Female, age 91, both hemispheres
690.8
2070
Male, age 76, both hemispheres
643.4
2371
Male, age 61, both hemispheres
517.3
Principal sensory trigeminal nucleus nTPM: 841.9
2158
Male, age 61, both hemispheres
1173.8
2008
Male, age 80, left hemisphere
830.5
2367
Female, age 91, left hemisphere
697.0
2324
Male, age 76, both hemispheres
666.3
Reticular pontine nucleus, caudal nTPM: 734.1
2092
Male, age 76, both hemispheres
851.1
2559
Male, age 74, both hemispheres
719.7
2332
Male, age 80, right hemisphere
717.4
2457
Female, age 91, both hemispheres
648.3
Reticular pontine nucleus, oral nTPM: 740.9
2361
Male, age 74, both hemispheres
846.7
2012
Female, age 85, both hemispheres
763.1
1939
Male, age 80, both hemispheres
732.7
2366
Female, age 91, both hemispheres
729.5
2167
Male, age 76, both hemispheres
632.6
Reticulotegmental nucleus nTPM: 658.3
2322
Female, age 91, both hemispheres
690.3
2325
Male, age 76, both hemispheres
677.3
2452
Male, age 74, both hemispheres
639.2
2333
Male, age 80, both hemispheres
626.4
Spinal trigeminal nucleus, oral nTPM: 634.8
2737
Female, age 85, both hemispheres
655.5
2164
Male, age 80, both hemispheres
644.7
1978
Male, age 76, both hemispheres
604.2
Subcoeruleus area nTPM: 694.4
1958
Male, age 80, both hemispheres
831.9
2323
Female, age 91, left hemisphere
770.7
2089
Male, age 76, left hemisphere
682.6
2369
Female, age 85, left hemisphere
601.9
2451
Male, age 74, both hemispheres
585.0
Superior olive nTPM: 798.7
1875
Female, age 85, both hemispheres
1117.2
2020
Male, age 76, both hemispheres
783.4
2364
Male, age 74, right hemisphere
745.5
2561
Female, age 91, both hemispheres
682.8
2329
Male, age 80, right hemisphere
664.6
Ventral periolivary nuclei nTPM: 818.7
2130
Female, age 85, both hemispheres
992.9
2165
Male, age 80, both hemispheres
885.8
2023
Male, age 76, both hemispheres
760.2
2794
Female, age 91, left hemisphere
636.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 732.1
2840
Female, age 85, both hemispheres
891.2
1959
Male, age 76, both hemispheres
879.4
2449
Male, age 74, both hemispheres
831.2
2161
Male, age 80, both hemispheres
674.0
2456
Female, age 91, both hemispheres
561.0
2359
Male, age 61, both hemispheres
555.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
