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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Medium
Cells in tubules:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1373.5
nTPM
HPA:
951.5
nTPM
GTEx:
1373.5
nTPM
FANTOM5:
1184.0
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA058345
Antibody CAB004655
Cells in glomeruli
Not detected
Medium
Cells in tubules
Medium
Medium
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
951.5
Female, age 58
Kidney sample 55 nTPM: 697
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 669.7
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 569.1
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 576.8
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 1122.5
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 1050.2
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 1900.3
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 944.2
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 1033.7
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1373.5
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 1258.9
Samples: 85
Max nTPM: 2126.0
Min nTPM: 734.7
Std nTPM: 290.8
Median nTPM: 1209.1
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
2126.0
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
2113.2
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
2025.6
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
1959.0
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
1816.9
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
1815.9
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
1749.2
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
1729.2
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
1579.9
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
1544.9
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
1517.9
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
1516.3
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
1507.2
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
1503.3
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
1498.5
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
1475.1
GTEX-12696-0926-SM-5FQTV
60-69 years, male
1452.2
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
1450.7
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
1439.7
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
1421.5
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
1413.5
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
1412.9
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
1404.6
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
1395.5
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
1385.7
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
1381.3
GTEX-14C39-2126-SM-664OH
40-49 years, male
1371.6
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
1361.4
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
1359.6
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
1348.4
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
1333.1
GTEX-O5YV-1226-SM-EV795
60-69 years, female
1302.1
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
1290.3
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
1284.4
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
1277.6
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
1256.5
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
1246.1
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
1246.0
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
1242.2
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
1240.7
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
1238.1
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
1213.5
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
1209.1
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
1205.8
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
1204.4
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
1194.8
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
1194.4
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
1181.7
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
1171.2
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
1170.1
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
1160.9
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
1147.9
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
1127.6
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
1105.6
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
1104.4
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
1103.0
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
1099.8
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
1099.4
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
1098.4
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
1092.1
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
1086.9
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
1077.7
GTEX-13112-2126-SM-5GCO4
50-59 years, male
1072.1
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
1065.6
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
1052.6
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
1048.5
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
1042.2
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
1037.1
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
1036.4
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
1018.5
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
1011.4
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
1001.0
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
981.3
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
972.6
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
971.7
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
964.9
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
957.9
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
957.6
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
909.8
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
891.0
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
863.9
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
815.6
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
768.9
GTEX-RN64-1626-SM-48FD7
50-59 years, male
749.1
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
734.7
Show allShow less
Kidney - Medulla Average nTPM: 1373.5
Samples: 4
Max nTPM: 2015.3
Min nTPM: 985.9
Std nTPM: 386.4
Median nTPM: 1246.4
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
2015.3
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
1285.1
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
1207.8
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
985.9
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
