We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PLCG2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PLCG2
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:1932.2 nTPM
FANTOM5:14.9 Scaled Tags Per Million
Pig:2.8 nTPM
Allen mouse:0.1 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1932.2
Sample id Sample description nTPM
Area postrema
nTPM: 1400.3
2306 Male, age 80, both hemispheres 2050.2
2799 Male, age 61, both hemispheres 1175.9
2054 Male, age 76, both hemispheres 974.6
Dorsal medullary reticular nucleus
nTPM: 1156.0
2373 Male, age 61, both hemispheres 1486.5
2040 Female, age 85, both hemispheres 1109.4
2088 Male, age 76, both hemispheres 872.0
Dorsal motor vagal complex
nTPM: 1369.2
2185 Male, age 76, both hemispheres 1874.5
2813 Female, age 72, unknown 1778.2
2000 Male, age 74, unknown 1608.1
2807 Female, age 85, both hemispheres 1286.5
2844 Male, age 55, unknown 1206.4
2797 Male, age 61, both hemispheres 1175.0
2643 Male, age 74, both hemispheres 1110.6
2133 Female, age 91, both hemispheres 914.5
Gigantocellular reticular nuclei, medullary
nTPM: 1502.2
2310 Male, age 80, both hemispheres 1750.1
2314 Male, age 61, both hemispheres 1708.6
2022 Male, age 76, right hemisphere 1499.9
2387 Female, age 91, both hemispheres 1441.6
1876 Female, age 85, both hemispheres 1334.4
2462 Male, age 74, both hemispheres 1278.7
Gigantocellular reticular nuclei, pars
nTPM: 1492.9
2168 Male, age 76, both hemispheres 1819.7
2336 Male, age 61, both hemispheres 1668.9
2706 Male, age 80, both hemispheres 1458.3
2330 Male, age 80, both hemispheres 1423.9
2084 Female, age 85, both hemispheres 1093.5
Inferior olive
nTPM: 1932.2
2628 Female, age 91, both hemispheres 2285.2
2563 Male, age 74, both hemispheres 2124.0
2178 Male, age 61, both hemispheres 1846.4
2085 Female, age 85, both hemispheres 1736.1
2379 Male, age 80, both hemispheres 1669.5
Lateral medullary reticular nucleus
nTPM: 1639.1
2190 Female, age 85, both hemispheres 2252.7
2374 Male, age 61, both hemispheres 1970.5
2852 Male, age 80, both hemispheres 1456.7
2804 Female, age 91, both hemispheres 1417.6
2305 Male, age 74, both hemispheres 1395.9
2044 Male, age 76, both hemispheres 1341.2
Medial olivary nucleus
nTPM: 1359.3
2851 Male, age 80, both hemispheres 1904.1
1962 Male, age 76, both hemispheres 1618.2
2138 Female, age 91, both hemispheres 1144.2
1943 Male, age 61, both hemispheres 770.7
Medial vestibular nucleus
nTPM: 1317.2
2624 Male, age 61, both hemispheres 1750.6
2743 Female, age 85, both hemispheres 1483.4
2801 Male, age 74, both hemispheres 1470.8
2803 Female, age 91, both hemispheres 1314.3
2093 Male, age 80, both hemispheres 1034.2
2134 Male, age 76, both hemispheres 849.7
Motor hypoglossal nucleus
nTPM: 1373.2
2461 Male, age 61, both hemispheres 2099.9
2182 Male, age 80, both hemispheres 1787.7
2132 Female, age 85, both hemispheres 1062.6
2125 Female, age 91, both hemispheres 990.2
2277 Male, age 76, both hemispheres 925.5
Nucleus ambiguus
nTPM: 774.2
2071 Male, age 76, both hemispheres 834.9
2096 Female, age 85, both hemispheres 713.5
Nucleus cuneatus
nTPM: 1382.9
2562 Male, age 61, both hemispheres 1754.2
2381 Male, age 80, both hemispheres 1706.6
2564 Male, age 74, both hemispheres 1544.7
2808 Female, age 85, both hemispheres 1530.9
2380 Male, age 80, both hemispheres 1466.3
2376 Male, age 61, both hemispheres 1400.5
2805 Female, age 91, both hemispheres 1177.4
2100 Male, age 76, both hemispheres 955.4
2131 Male, age 76, both hemispheres 910.4
Nucleus gracilis
nTPM: 1683.0
2382 Male, age 80, both hemispheres 1936.2
2299 Female, age 85, both hemispheres 1562.5
2627 Male, age 74, both hemispheres 1550.3
Nucleus raphe obscurus
nTPM: 1007.9
2845 Female, age 85, midline 1130.2
2800 Male, age 61, midline 1123.6
2142 Male, age 76, midline 769.9
Nucleus raphe pallidus
nTPM: 942.4
2183 Male, age 80, midline 1585.2
1924 Male, age 61, midline 877.2
2145 Male, age 76, midline 365.0
Nucleus tractus solitarii
nTPM: 1444.5
2191 Female, age 85, both hemispheres 2055.4
2307 Male, age 80, both hemispheres 1662.0
2656 Male, age 76, both hemispheres 1391.4
2144 Female, age 91, right hemisphere 669.3
Parvicellular reticular nuclei
nTPM: 1227.8
2558 Male, age 74, both hemispheres 1695.0
2095 Male, age 76, both hemispheres 1209.4
2119 Male, age 80, both hemispheres 779.0
Parvicellular reticular nuclei, medullary
nTPM: 1436.2
2181 Male, age 80, left hemisphere 1784.3
2189 Female, age 91, both hemispheres 1479.0
2091 Female, age 85, both hemispheres 1045.3
Peritrigeminal nucleus
nTPM: 1280.0
2179 Male, age 61, both hemispheres 1429.9
2067 Female, age 85, both hemispheres 1300.1
2136 Male, age 76, both hemispheres 1110.0
Prepositus hypoglossal nucleus
nTPM: 1197.7
2855 Female, age 85, right hemisphere 1200.6
2086 Male, age 80, both hemispheres 1194.7
Spinal trigeminal nucleus, caudal
nTPM: 1416.2
2308 Male, age 80, both hemispheres 1821.8
2312 Male, age 61, both hemispheres 1648.1
2390 Female, age 91, both hemispheres 1363.7
2447 Male, age 76, both hemispheres 1158.7
2642 Male, age 74, both hemispheres 1088.7
Spinal trigeminal nucleus, interpolar
nTPM: 1242.9
2389 Female, age 91, both hemispheres 1687.1
2625 Male, age 61, both hemispheres 1205.8
2386 Female, age 85, both hemispheres 1190.6
2066 Male, age 76, right hemisphere 1175.1
2033 Male, age 80, both hemispheres 956.0
Spinal vestibular nucleus
nTPM: 1547.5
2748 Male, age 76, both hemispheres 1838.5
2186 Female, age 91, both hemispheres 1728.5
2806 Female, age 85, both hemispheres 1637.5
2796 Male, age 61, both hemispheres 1558.7
2780 Male, age 80, both hemispheres 1367.3
2384 Male, age 74, both hemispheres 1154.8
Superior vestibular nucleus
nTPM: 1419.2
2383 Male, age 74, both hemispheres 1693.2
2015 Male, age 80, both hemispheres 1429.7
2061 Male, age 76, both hemispheres 1134.6
Ventral medullary reticular nucleus
nTPM: 1312.2
2372 Male, age 61, both hemispheres 1553.8
2060 Male, age 76, both hemispheres 1070.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1367.7
2302 Female, age 91, both hemispheres 1719.3
2180 Male, age 61, both hemispheres 1539.3
1986 Male, age 76, both hemispheres 1396.1
2741 Female, age 85, both hemispheres 1322.1
2118 Male, age 80, both hemispheres 861.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

14.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 14.9
FF:10155-103A2 76 years, female 17.7
FF:10038-101F2 18-64 years, mixed 16.2
FF:10174-103C3 60 years, female 10.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2.8
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.5
Sample C Male 3.7
Sample D Male 2.7

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
68160832 Antisense, RP_041122_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org